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2024-05-18 23:58:25

Gene list

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COG category: Cell motility
Organism: Shigella boydii Sb227, Sb227

Number of genes found: 60

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Shigella boydii Sb227, Sb227
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SBO_2372 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS2360444 468 - 0.557692
NA SBO_1632 putative tail component of prophageSubName: Full=Putative tail component of prophage; chromosome CDS1620813 741 - 0.553306
ccmD SBO_2109 heme exporter protein CSubName: Full=Heme exporter protein C; chromosome CDS2089470 210 + 0.557143
cheB SBO_1117 protein methylesteraseRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase; EC=3.1.1.61; chromosome CDS1121368 939 + 0.528221
cheR SBO_1116 protein glutamate methyltransferaseSubName: Full=Protein glutamate methyltransferase; chromosome CDS1120601 765 + 0.541176
cheZ SBO_1119 CheY protein phophataseRecName: Full=Protein phosphatase CheZ; EC=3.1.3.-; AltName: Full=Chemotaxis protein CheZ; chromosome CDS1122721 645 + 0.533333
ecpD SBO_0126 probable pilin chaperoneSubName: Full=Probable pilin chaperone; chromosome CDS140393 741 - 0.442645
fimA SBO_4364 major type 1 subunit fimbrinSubName: Full=Major type 1 subunit fimbrin; chromosome CDS4416896 549 + 0.513661
fimC SBO_4366 periplasmic chaperoneSubName: Full=Periplasmic chaperone; chromosome CDS4418085 726 + 0.442149
fimF SBO_4368 fimbrial morphologySubName: Full=Fimbrial morphology; chromosome CDS4421523 531 + 0.493409
fimG SBO_4369 fimbrial morphologySubName: Full=Fimbrial morphology; chromosome CDS4422066 504 + 0.52381
fimI SBO_4365 fimbrial proteinSubName: Full=Fimbrial protein; chromosome CDS4417410 639 + 0.494523
flgA SBO_1992 assembly of basal-body periplasmic P ringSubName: Full=Assembly of basal-body periplasmic P ring; chromosome CDS1965793 660 + 0.524242
flgB SBO_1991 cell-proximal portion of basal-body rodSubName: Full=Cell-proximal portion of basal-body rod; chromosome CDS1965308 330 - 0.527273
flgC SBO_1990 cell-proximal portion of basal-body rodSubName: Full=Cell-proximal portion of basal-body rod; chromosome CDS1964900 405 - 0.530864
flgD SBO_1989 initiation of hook assemblySubName: Full=Initiation of hook assembly; chromosome CDS1964193 696 - 0.543103
flgE SBO_1988 hook proteinSubName: Full=Hook protein; chromosome CDS1962960 1209 - 0.513648
flgF SBO_1987 cell-proximal portion of basal-body rodSubName: Full=Cell-proximal portion of basal-body rod; chromosome CDS1962185 756 - 0.589947
flgG SBO_1986 cell-distal portion of basal-body rodSubName: Full=Cell-distal portion of basal-body rod; chromosome CDS1961265 783 - 0.535121
flgH SBO_1985 basal-body outer-membrane L (lipopolysaccharide layer) ring proteinRecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor; chromosome CDS1960514 699 - 0.532189
flgI SBO_1984 FlgIRecName: Full=Flagellar P-ring protein; AltName: Full=Basal body P-ring protein; Flags: Precursor; chromosome CDS1959405 1098 - 0.542805
flgK SBO_1982 hook-filament junction protein 1SubName: Full=Hook-filament junction protein 1; chromosome CDS1956755 1644 - 0.520073
flgL SBO_1981 hook-filament junction proteinSubName: Full=Hook-filament junction protein; chromosome CDS1955790 954 - 0.509434
flgM SBO_1993 anti-FliA factorSubName: Full=Anti-FliA factor; chromosome CDS1966528 330 + 0.533333
flgN SBO_1994 protein of flagellar biosynthesisSubName: Full=Protein of flagellar biosynthesis; chromosome CDS1966862 417 + 0.47482
flhA SBO_1121 FlhASubName: Full=FlhA; chromosome CDS1124544 2079 + 0.546417
flhB SBO_1120 putative part of export apparatus for flagellar proteinsSubName: Full=Putative part of export apparatus for flagellar proteins; chromosome CDS1123520 1032 + 0.54845
fliC SBO_1083 flagellinSubName: Full=Flagellin; chromosome CDS1092639 1707 + 0.496192
fliD SBO_1082 FliDSubName: Full=FliD; chromosome CDS1090967 1407 - 0.520967
fliE SBO_1071 FliERecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS1082649 315 + 0.549206
fliF SBO_1070 FliFRecName: Full=Flagellar M-ring protein; chromosome CDS1080776 1659 - 0.547318
fliJ SBO_1065 flagellar fliJ proteinSubName: Full=Flagellar fliJ protein; chromosome CDS1076028 444 - 0.529279
fliL SBO_1063 flagellar biosynthesisSubName: Full=Flagellar biosynthesis; chromosome CDS1074339 465 - 0.535484
fliM SBO_1062 FliMRecName: Full=Flagellar motor switch protein FliM; chromosome CDS1073330 1005 - 0.529353
fliN SBO_1061 FliNSubName: Full=FliN; chromosome CDS1072920 414 - 0.548309
fliO SBO_1060 flagellar biosynthesisSubName: Full=Flagellar biosynthesis; chromosome CDS1072552 366 - 0.557377
fliQ SBO_1058 flagellar biosynthesisSubName: Full=Flagellar biosynthesis; chromosome CDS1071537 270 - 0.514815
fliR SBO_1057 flagellar biosynthesisRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS1070743 786 - 0.475827
fliS SBO_1081 FliSSubName: Full=FliS; chromosome CDS1090532 411 - 0.501217
gspE SBO_3013 putative type II secretion proteinSubName: Full=Putative type II secretion protein; chromosome CDS3014040 1353 + 0.592018
gspF SBO_3014 putative type II secretion proteinSubName: Full=Putative type II secretion protein; chromosome CDS3015532 1224 + 0.580065
gspG SBO_3015 putative type II secretion proteinSubName: Full=Putative type II secretion protein; chromosome CDS3016772 456 + 0.519737
gspH SBO_3016 putative type II secretion proteinSubName: Full=Putative type II secretion protein; chromosome CDS3017264 468 + 0.549145
gspI SBO_3017 putative type II secretion proteinSubName: Full=Putative type II secretion protein; chromosome CDS3017791 372 + 0.575269
hofC SBO_0094 HofCSubName: Full=HofC; chromosome CDS102416 1203 - 0.528678
lpfA SBO_3546 putative major fimbrial subunitSubName: Full=Putative major fimbrial subunit; chromosome CDS3556159 543 - 0.489871
ppdA SBO_2718 prepilin peptidase dependent protein ASubName: Full=Prepilin peptidase dependent protein A; chromosome CDS2728955 471 - 0.541401
spy SBO_1347 SpySubName: Full=Spy; chromosome CDS1331191 471 + 0.505308
tsr SBO_4414 methyl-accepting chemotaxis protein ISubName: Full=Methyl-accepting chemotaxis protein I; chromosome CDS4468358 1656 + 0.547705
ycbF SBO_2287 putative chaperoneSubName: Full=Putative chaperone; chromosome CDS2275664 738 - 0.517615
yfcS SBO_2375 putative chaperoneSubName: Full=Putative chaperone; chromosome CDS2361918 753 - 0.569721
yfcU SBO_2376 PapC-like porin proteinSubName: Full=PapC-like porin protein; chromosome CDS2362690 2643 - 0.51154
yggR SBO_3039 putative protein transportSubName: Full=Uncharacterized protein; chromosome CDS3038416 1026 + 0.545809
ygiL SBO_2901 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS2903381 579 + 0.447323
yiiO SBO_3931 Uncharacterized periplasmic proteinSubName: Full=Uncharacterized periplasmic protein; chromosome CDS3959393 504 + 0.498016
yjaI SBO_4023 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4059687 567 - 0.516755
ylbE SBO_0424 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS438838 1002 - 0.573852
ymfL SBO_0254 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS269875 570 - 0.489474
yraJ SBO_3240 putative outer membrane proteinSubName: Full=Putative outer membrane protein; chromosome CDS3245051 2334 - 0.476007
yrfC SBO_3381 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3363458 540 - 0.553704