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2024-05-11 10:06:47

Gene list

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COG category: Cell motility
Organism: Escherichia coli W3110, K-12

Number of genes found: 123

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Escherichia coli W3110, K-12
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
cheA fused chemotactic sensory histidine kinase (soluble) in two-component regulatory system with CheB and CheYRecName: Full=Chemotaxis protein CheA; EC=2.7.13.3; chromosome CDS1975074 1965 - 0.531298
cheB fused chemotaxis regulator and protein-glutamate methylesterase in two-component regulatory system with CheARecName: Full=Chemotaxis response regulator protein-glutamate methylesterase; EC=3.1.1.61; chromosome CDS1969166 1050 - 0.542857
cheR chemotaxis regulatorRecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; chromosome CDS1970218 861 - 0.542393
cheW purine-binding chemotaxis proteinRecName: Full=Chemotaxis protein CheW; chromosome CDS1974550 504 - 0.519841
cheZ chemotaxis regulatorRecName: Full=Protein phosphatase CheZ; EC=3.1.3.-; AltName: Full=Chemotaxis protein CheZ; chromosome CDS1968107 645 - 0.534884
cpxP periplasmic protein combats stressRecName: Full=Periplasmic protein CpxP; Flags: Precursor; chromosome CDS3530361 501 - 0.500998
ecpD predicted periplasmic pilin chaperoneRecName: Full=Probable fimbrial chaperone YadV; Flags: Precursor; chromosome CDS155461 741 - 0.443995
fimA major type 1 subunit fimbrinRecName: Full=Type-1 fimbrial protein, A chain; AltName: Full=Type-1A pilin; Flags: Precursor; chromosome CDS4547795 549 + 0.517304
fimC chaperone, periplasmicRecName: Full=Chaperone protein FimC; Flags: Precursor; chromosome CDS4548984 726 + 0.444904
fimD outer membrane usher protein, type 1 fimbrial synthesisRecName: Full=Outer membrane usher protein FimD; Flags: Precursor; chromosome CDS4549776 2637 + 0.486159
fimF minor component of type 1 fimbriaeRecName: Full=Protein FimF; Flags: Precursor; chromosome CDS4552422 531 + 0.495292
fimG minor component of type 1 fimbriaeRecName: Full=Protein FimG; Flags: Precursor; chromosome CDS4552965 504 + 0.52381
fimI fimbrial protein involved in type 1 pilus biosynthesisRecName: Full=Fimbrin-like protein FimI; Flags: Precursor; chromosome CDS4548408 540 + 0.492593
flgA assembly protein for flagellar basal-body periplasmic P ringRecName: Full=Flagella basal body P-ring formation protein FlgA; Flags: Precursor; chromosome CDS1131781 660 - 0.522727
flgB flagellar component of cell-proximal portion of basal-body rodRecName: Full=Flagellar basal body rod protein FlgB; AltName: Full=Putative proximal rod protein; chromosome CDS1132595 417 + 0.534772
flgC flagellar component of cell-proximal portion of basal-body rodRecName: Full=Flagellar basal-body rod protein FlgC; AltName: Full=Putative proximal rod protein; chromosome CDS1133015 405 + 0.528395
flgD flagellar hook assembly proteinRecName: Full=Basal-body rod modification protein FlgD; chromosome CDS1133431 696 + 0.545977
flgE flagellar hook protein chromosome CDS1134151 1209 + 0.515302
flgF flagellar component of cell-proximal portion of basal-body rodRecName: Full=Flagellar basal-body rod protein FlgF; AltName: Full=Putative proximal rod protein; chromosome CDS1135379 756 + 0.59127
flgG flagellar component of cell-distal portion of basal-body rodRecName: Full=Flagellar basal-body rod protein FlgG; AltName: Full=Distal rod protein; chromosome CDS1136306 783 + 0.537676
flgH flagellar protein of basal-body outer-membrane L ringRecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor; chromosome CDS1137141 699 + 0.53505
flgI predicted flagellar basal body proteinRecName: Full=Flagellar P-ring protein; AltName: Full=Basal body P-ring protein; Flags: Precursor; chromosome CDS1137851 1098 + 0.541894
flgJ muramidaseRecName: Full=Peptidoglycan hydrolase FlgJ; EC=3.2.1.-; AltName: Full=Muramidase FlgJ; chromosome CDS1138948 942 + 0.546709
flgK flagellar hook-filament junction protein 1RecName: Full=Flagellar hook-associated protein 1; Short=HAP1; chromosome CDS1139955 1644 + 0.518248
flgL flagellar hook-filament junction proteinRecName: Full=Flagellar hook-associated protein 3; Short=HAP3; AltName: Full=Hook-filament junction protein; chromosome CDS1141610 954 + 0.507338
flgM anti-sigma factor for FliA (sigma 28)RecName: Full=Negative regulator of flagellin synthesis; AltName: Full=Anti-sigma-28 factor; chromosome CDS1131412 294 - 0.527211
flgN export chaperone for FlgK and FlgLRecName: Full=Flagella synthesis protein FlgN; chromosome CDS1130991 417 - 0.482014
flhA predicted flagellar export pore protein chromosome CDS1964686 2079 - 0.548822
flhB predicted flagellar export pore proteinRecName: Full=Flagellar biosynthetic protein FlhB; chromosome CDS1966757 1149 - 0.549173
fliC flagellar filament structural proteinRecName: Full=Flagellin; chromosome CDS2004247 1497 - 0.47495
fliD flagellar filament capping protein chromosome CDS2006009 1407 + 0.522388
fliE flagellar basal-body componentRecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS2014837 315 - 0.539683
fliF flagellar basal-body MS-ring and collar proteinRecName: Full=Flagellar M-ring protein; chromosome CDS2015366 1659 + 0.546112
fliG flagellar motor switching and energizing componentRecName: Full=Flagellar motor switch protein FliG; chromosome CDS2017017 996 + 0.556225
fliH flagellar biosynthesis proteinRecName: Full=Flagellar assembly protein FliH; chromosome CDS2018005 687 + 0.570597
fliI flagellum-specific ATP synthaseRecName: Full=Flagellum-specific ATP synthase; EC=3.6.3.14; chromosome CDS2018691 1374 + 0.585881
fliJ flagellar proteinRecName: Full=Flagellar FliJ protein; chromosome CDS2020083 444 + 0.515766
fliK flagellar hook-length control proteinRecName: Full=Flagellar hook-length control protein; chromosome CDS2020523 1128 + 0.548759
fliL flagellar biosynthesis proteinRecName: Full=Flagellar protein FliL; chromosome CDS2021755 465 + 0.533333
fliM flagellar motor switching and energizing componentRecName: Full=Flagellar motor switch protein FliM; chromosome CDS2022224 1005 + 0.533333
fliN flagellar motor switching and energizing componentRecName: Full=Flagellar motor switch protein FliN; chromosome CDS2023225 414 + 0.550725
fliO flagellar biosynthesis proteinRecName: Full=Flagellar protein FliO; chromosome CDS2023641 366 + 0.546448
fliP flagellar biosynthesis proteinRecName: Full=Flagellar biosynthetic protein FliP; Flags: Precursor; chromosome CDS2024006 738 + 0.531165
fliQ flagellar biosynthesis proteinRecName: Full=Flagellar biosynthetic protein FliQ; chromosome CDS2024753 270 + 0.503704
fliR flagellar export pore proteinRecName: Full=Flagellar biosynthetic protein FliR; chromosome CDS2025030 786 + 0.474555
fliS flagellar protein potentiates polymerizationRecName: Full=Flagellar protein FliS; chromosome CDS2007440 411 + 0.498783
gspD general secretory pathway component, crypticRecName: Full=Putative type II secretion system protein D; Short=T2SS protein D; AltName: Full=Putative general secretion pathway protein D; Flags: Precursor; chromosome CDS4182087 1953 - 0.501792
gspE general secretory pathway component, crypticRecName: Full=Putative type II secretion system protein E; Short=T2SS protein E; AltName: Full=Putative general secretion pathway protein E; AltName: Full=Type II traffic warden ATPase; chromosome CDS4180596 1482 - 0.524966
gspF general secretory pathway component, crypticRecName: Full=Putative type II secretion system protein F; Short=T2SS protein F; AltName: Full=General secretion pathway protein F; AltName: Full=Protein transport protein HofF; chromosome CDS4179403 1197 - 0.510443
gspG pseudopilin, cryptic, general secretion pathwayRecName: Full=Putative type II secretion system protein G; Short=T2SS protein G; AltName: Full=Protein transport protein HofG; AltName: Full=Putative general secretion pathway protein G; Flags: Precursor; chromosome CDS4178956 438 - 0.486301
gspH predicted general secretory pathway component, crypticRecName: Full=Putative type II secretion system protein H; Short=T2SS protein H; AltName: Full=Protein transport protein HofH; AltName: Full=Putative general secretion pathway protein H; Flags: Precursor; chromosome CDS4178439 510 - 0.560784
gspI general secretory pathway component, crypticRecName: Full=Putative type II secretion system protein I; Short=T2SS protein I; AltName: Full=Putative general secretion pathway protein I; Flags: Precursor; chromosome CDS4178065 378 - 0.478836
gspO bifunctional prepilin leader peptidase and methylaseRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; Includes: RecName: Full=Leader peptidase; EC=3.4.23.43; AltName: Full=Prepilin peptidase; Includes: RecName: Full=N-methyltransferase; EC=2.1.1.-; chromosome CDS4174196 678 - 0.504425
hofB conserved hypothetical protein with nucleoside triphosphate hydrolase domainRecName: Full=Protein transport protein HofB homolog; chromosome CDS115714 1386 - 0.534632
hofC assembly protein in type IV pilin biogenesis, transmembrane proteinRecName: Full=Protein transport protein HofC homolog; chromosome CDS114522 1203 - 0.519534
htrE predicted outer membrane usher proteinRecName: Full=Outer membrane usher protein HtrE; AltName: Full=Heat shock protein E; Flags: Precursor; chromosome CDS152829 2598 - 0.43341
motA proton conductor component of flagella motorRecName: Full=Motility protein A; AltName: Full=Chemotaxis protein MotA; chromosome CDS1977966 888 - 0.513514
motB protein that enables flagellar motor rotationRecName: Full=Motility protein B; AltName: Full=Chemotaxis protein MotB; chromosome CDS1977043 927 - 0.531823
nfrB bacteriophage N4 receptor, inner membrane subunitRecName: Full=Bacteriophage N4 adsorption protein B; chromosome CDS590164 2238 - 0.525022
ppdA conserved hypothetical proteinRecName: Full=Prepilin peptidase-dependent protein A; Flags: Precursor; chromosome CDS2962363 471 - 0.541401
ppdC hypothetical proteinRecName: Full=Prepilin peptidase-dependent protein C; Flags: Precursor; chromosome CDS2961097 324 - 0.549383
ppdD predicted major pilin subunitRecName: Full=Prepilin peptidase-dependent protein D; Flags: Precursor; chromosome CDS117109 441 - 0.530612
pppA bifunctional prepilin leader peptidase and methylaseRecName: Full=Leader peptidase PppA; chromosome CDS3112199 810 - 0.517284
sfmA predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein SfmA; AltName: Full=Type-1A pilin; Flags: Precursor; chromosome CDS557435 543 + 0.445672
sfmC pilin chaperone, periplasmicRecName: Full=Probable fimbrial chaperone SfmC; Flags: Precursor; chromosome CDS558197 693 + 0.425685
sfmD predicted outer membrane export usher proteinRecName: Full=Outer membrane usher protein SfmD; Flags: Precursor; chromosome CDS558920 2604 + 0.478111
sfmF predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein SfmF; Flags: Precursor; chromosome CDS562553 516 + 0.5
sfmH predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein SfmH; Flags: Precursor; chromosome CDS561565 978 + 0.453988
spy envelope stress induced periplasmic proteinRecName: Full=Spheroplast protein Y; Flags: Precursor; chromosome CDS1826854 486 - 0.50823
tap methyl-accepting protein IVRecName: Full=Methyl-accepting chemotaxis protein IV; Short=MCP-IV; AltName: Full=Dipeptide chemoreceptor protein; chromosome CDS1971097 1602 - 0.535581
tar methyl-accepting chemotaxis protein IIRecName: Full=Methyl-accepting chemotaxis protein II; Short=MCP-II; AltName: Full=Aspartate chemoreceptor protein; chromosome CDS1972744 1662 - 0.527677
tolC transport channelRecName: Full=Outer membrane protein TolC; AltName: Full=Multidrug efflux pump subunit TolC; AltName: Full=Outer membrane factor TolC; Flags: Precursor; chromosome CDS3176771 1482 + 0.513495
trg methyl-accepting chemotaxis protein III, ribose and galactose sensor receptorRecName: Full=Methyl-accepting chemotaxis protein III; Short=MCP-III; AltName: Full=Ribose and galactose chemoreceptor protein; chromosome CDS1494184 1641 + 0.512492
tsr methyl-accepting chemotaxis protein I, serine sensor receptorRecName: Full=Methyl-accepting chemotaxis protein I; Short=MCP-I; AltName: Full=Serine chemoreceptor protein; chromosome CDS4596337 1656 + 0.546498
ugpC glycerol-3-phosphate transporter subunitRecName: Full=sn-glycerol-3-phosphate import ATP-binding protein UgpC; EC=3.6.3.20; chromosome CDS4051235 1071 + 0.577031
wzc protein-tyrosine kinaseRecName: Full=Tyrosine-protein kinase wzc; EC=2.7.10.-; chromosome CDS2135627 2163 - 0.526583
yadC predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YadC; Flags: Precursor; chromosome CDS149715 1239 - 0.403551
yadN predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YadN; Flags: Precursor; chromosome CDS156299 585 - 0.447863
yagX predicted aromatic compound dioxygenaseRecName: Full=Probable outer membrane usher protein EcpC; Flags: Precursor; chromosome CDS306031 2526 - 0.552652
ybaQ predicted DNA-binding transcriptional regulatorRecName: Full=Uncharacterized HTH-type transcriptional regulator YbaQ; chromosome CDS507442 342 + 0.447368
ybgD predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YbgD; Flags: Precursor; chromosome CDS752651 567 - 0.467372
ybgP predicted assembly proteinRecName: Full=Uncharacterized fimbrial chaperone YbgP; Flags: Precursor; chromosome CDS749401 729 - 0.477366
ybgQ predicted outer membrane proteinRecName: Full=Uncharacterized outer membrane usher protein YbgQ; Flags: Precursor; chromosome CDS750144 2448 - 0.499591
ycbF predicted periplasmic pilini chaperoneRecName: Full=Uncharacterized fimbrial chaperone YcbF; Flags: Precursor; chromosome CDS1004369 711 + 0.517581
ycbQ predicted fimbrial-like adhesin proteinRecName: Full=Fimbrial subunit ElfA; Flags: Precursor; chromosome CDS998290 540 + 0.424074
ycbR predicted periplasmic pilin chaperoneRecName: Full=Probable fimbrial chaperone protein ElfD; Flags: Precursor; chromosome CDS998912 702 + 0.450142
ycbS predicted outer membrane usher proteinRecName: Full=Probable outer membrane usher protein ElfC; Flags: Precursor; chromosome CDS999638 2601 + 0.478662
ycbU predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YcbU; Flags: Precursor; chromosome CDS1003311 543 + 0.471455
ycjV predicted sugar transporter subunitRecName: Full=Putative uncharacterized ABC transporter ATP-binding protein YcjV; chromosome CDS1382535 969 + 0.505676
ydeR predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YdeR; Flags: Precursor; chromosome CDS1589507 504 - 0.448413
ydeS predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YdeS; Flags: Precursor; chromosome CDS1590023 531 - 0.448211
ydeT hypothetical proteinRecName: Full=Putative uncharacterized protein ydet; chromosome CDS1590567 1149 - 0.445605
yehB predicted outer membrane proteinRecName: Full=Outer membrane usher protein YehB; Flags: Precursor; chromosome CDS2191764 2481 - 0.455058
yehC predicted periplasmic pilin chaperoneRecName: Full=Probable fimbrial chaperone YehC; Flags: Precursor; chromosome CDS2194260 720 - 0.393056
yehD predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YehD; Flags: Precursor; chromosome CDS2195014 543 - 0.405157
yfcP predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YfcP; Flags: Precursor; chromosome CDS2455497 540 - 0.487037
yfcQ predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YfcQ; Flags: Precursor; chromosome CDS2456033 489 - 0.466258
yfcR predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YfcR; Flags: Precursor; chromosome CDS2456518 513 - 0.491228
yfcS predicted periplasmic pilus chaperoneRecName: Full=Probable fimbrial chaperone YfcS; Flags: Precursor; chromosome CDS2457030 753 - 0.50996
yfcT predicted outer membrane export usher proteinRecName: Full=Putative outer membrane usher protein YfcU; Flags: Precursor; chromosome CDS2457802 897 - 0.532887
yfcU predicted export usher proteinRecName: Full=Putative outer membrane usher protein YfcU; Flags: Precursor; chromosome CDS2458711 1737 - 0.510075
yfcV predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YfcV; Flags: Precursor; chromosome CDS2460529 564 - 0.460993
yfjD predicted inner membrane proteinRecName: Full=UPF0053 inner membrane protein YfjD; chromosome CDS2747520 1197 + 0.517962
yfjI hypothetical proteinRecName: Full=Uncharacterized protein YfjI; chromosome CDS2757641 1410 + 0.379433
yggR predicted transporterRecName: Full=Uncharacterized protein YggR; chromosome CDS3092756 981 - 0.554536
yghE chromosome pseudo3109784 861 - 0.57259
ygiL predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YgiL; Flags: Precursor; chromosome CDS3184070 552 + 0.436594
yhcA predicted periplasmic chaperone proteinRecName: Full=Uncharacterized fimbrial chaperone YhcA; Flags: Precursor; chromosome CDS3361967 675 + 0.416296
yhcD predicted outer membrane proteinRecName: Full=Uncharacterized outer membrane usher protein YhcD; Flags: Precursor; chromosome CDS3362662 2382 + 0.45508
yifL predicted lipoproteinRecName: Full=Uncharacterized lipoprotein YifL; Flags: Precursor; chromosome CDS3641956 204 - 0.52451
ymfL predicted DNA-binding transcriptional regulatorRecName: Full=Uncharacterized protein YmfL; chromosome CDS1204833 570 + 0.494737
ymjB hypothetical proteinRecName: Full=Putative uncharacterized ABC transporter ATP-binding protein YcjV; chromosome CDS1383503 114 + 0.368421
ynaA predicted tail proteinRecName: Full=Putative uncharacterized protein YnaA; chromosome CDS1428168 1029 + 0.468416
yohG predicted outer membrane proteinRecName: Full=Putative multidrug resistance outer membrane protein MdtQ; Flags: Precursor; chromosome CDS2230657 1089 - 0.557392
yqiG predicted outer membrane usher proteinRecName: Full=Putative outer membrane usher protein YqiG; Flags: Precursor; chromosome CDS3186056 2466 + 0.422141
yqiH predicted periplasmic pilin chaperoneRecName: Full=Uncharacterized fimbrial chaperone YqiH; Flags: Precursor; chromosome CDS3188537 750 + 0.386667
yraH predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YraH; Flags: Precursor; chromosome CDS3287281 585 + 0.451282
yraI predicted periplasmic pilin chaperoneRecName: Full=Probable fimbrial chaperone YraI; Flags: Precursor; chromosome CDS3287945 696 + 0.442529
yraJ predicted outer membrane proteinRecName: Full=Outer membrane usher protein YraJ; Flags: Precursor; chromosome CDS3288669 2517 + 0.475963
yraK predicted fimbrial-like adhesin proteinRecName: Full=Uncharacterized fimbrial-like protein YraK; Flags: Precursor; chromosome CDS3291196 1092 + 0.478938
yrfB conserved membrane proteinRecName: Full=Putative DNA utilization protein HofO; chromosome CDS4118967 441 + 0.546485
yrfC predicted fimbrial assembly proteinRecName: Full=Putative DNA utilization protein HofN; chromosome CDS4118444 540 + 0.553704
zraP Zn-binding periplasmic proteinRecName: Full=Zinc resistance-associated protein; Flags: Precursor; chromosome CDS3434993 426 + 0.535211