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# Chlamydophila felis Fe/C-56, Fe/C-56

>gid:914339  CF0259  conserved hypothetical protein
MTVQPISTTSVDSIASREATQAAPLPPLDPLNTPPIGALLFSIYELLLQA
IEIRQQTVLTQSQQLNDNTNIQQQLNQETNQIKFAVVNAGAKEDDITRVQ
NQNQNYSAQRSNIQDELVTARQNGQIILSHASTNINIIQQLASQDSSFLK
TTSSIGSTVNQLNKPPS
>CF0376 abc2, ABC transporter
MVEPWISVDRIYKSYYDNEGQGHTVLHGISLQVFPDELLVILGKSGTGKS
VLLRHIMGLEVPDSGKVRYAKELTYKGRLKDLTISMVFQGGALFDFLSVR
ENVAFGLHAYNERYKVFSQGEINAKVNQALSNVGLSYAADFMPNKLSGGM
VKRVALARSLVYSPKLVLYDEPTAGLDPMTSREMTQLIFRLRKEQGIGGI
VITHDITLALALADRIAIHHQGTIPRIYTKEEFIQTNDALARQFFAGQYY
EMPIKEG
>CF0036 ami2, N-acetylmuramoyl-L-alanine amidase
MHVNCKYLFYCGLWFCLGAVLPAEAGKSPSLQAVLAEVEDASAKLLCHEA
DIQMLADRIDEQDSKIQKLSSTKPDALTKQIQQLEIEYKTLAKTVSVLTA
SVKDIQSTLQNKLQEVQQHHKTLSQDIRLLRRSLLALVDGSSPETYTDLS
NEVPSHIHVVQPGETLGKIATKYKIPVAELKKLNKLNSDVIYANQKLCLP
EHKK
>CF0781 clpP1, ATP-dependent Clp endopeptidase ATP-binding proteolytic subunit 1
MYCSMPDGEVENKLQDVIDRKILDTRRVFFSEPVTDKSAADAIKKLWYLE
LTNPGQPIVFVINSPGGSVDAGFAVWDQIKMMTSPVTTVVTGLAASMGSV
LSLCAAPGRRFATPHSRIMIHQPSIGGPITGQATDLDIHAREILKTKKRI
VDVYVEATGQPREVIEKAIDRDMWMTADEAKDFGLLDGILFSFNDL
>CF0094 clpP2, ATP-dependent Clp endopeptidase, ATP-binding proteolytic subunit 2
MTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQLLF
LMSEDPQKDIKVFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMG
ALLLSAGTKGKRYALPHSRMMIHQPSGGIIGTSADIQLQAAEILTLKKHL
ANILSECTGQPVEKIIEDSERDFFMGAEDAISYGLIDKVVSSAKDTKDKD
TIS
>CF0040 exbD, energy transducer
MKRIIVEDTEEDPSVNLTPLIDIVFVILMAFMIAMPLIRLDSIALAPGAE
NHKVLGENNEPQTIIKVFADRTITLNDRALSLGELKTQLSLLHQQHPNRV
PLLLQDGETPFKLYQEVKTTIESAGFHELHIALKS
>CF0353 ffh, signal recognition particle GTPase
MISSLSQKLSSIFSSLISSRRITEENISEAIREVRLALLDADVNYHVVKS
FIAKVKQKILGEEVWKHVSPGQQFIRHLHEELTELLISSEADLTTSGNPG
VVLLCGLQGTGKTTTCAKLAAYVLEKRKAKKVLVVPCDLKRYAAVDQLRN
LISKTKAELYNSEAQDPVKVVSQALDYAKQNGHDLVLIDTAGRLHVDEAM
MEELASIQKASKSCERLFVMNLAMGQDAVTTAKAFDDCLDLTGVIISMTD
GDARAGAVLSMKSLLGKPIKFEGCGEKIQDLRPFNAESMADRILGMGDTM
HFVQKMRECISEEEDEELGKKLIESTFTYEDYYKQMKAFRRMGPLRKLMG
MMPSFGGMKPSDKEIADSEEHMKRTEAIILSMTPQERSEKVELDMSRMKR
IAAGCGLTLGDVNQFRKRMMQSKKFFKNMSKEKIEQMKKKMSGGNLWR
>CF0580 flhA, type III secretory flagellar biosynthesis
MTSKQETLWRMALIPLGILFSFLVPLPQALLDAGLCINFILSLTVVFWVF
SVKSSLEAKLFPSLFLYLCLFRLGLNLASTRLILSSGWASPMIFSLGNFF
SSGNLGAGIAACCLFFLVNFLVIAKGSERVAEVRARFILEALPGKQMSLD
ADLLHGRASGFDIEKQKQDLFEESDFFSAMEGVFRFVKGDAVVGCILLIV
NFLSATYFSCSLDCTTDSLWLTVVGDALVSQVPALLTSCAAATLISKVGQ
KESLLEHIMDYYEQARIHFRIIALLLSSLLFVPGVPKAPVLACVIALFIS
HKQKKDIQNHSLVSEGFQKIYLNLPVDYTGESPREMYLLAREEIFNETGI
LLPQEMQIVRSEKKASLSGGGQHFYLEEVSLTHLLPILRNLVPEAIHGKI
VKALIRDAQNILGISVDEIIPKKISENSLLFLLKALVKERISIRLFPKIL
EAIALCGSPEDSQEMLSEKIRKYLGKHIGRALWDKENTLEVITVDSHVER
MIGDLYSKSNPMMCDKVVHQVRSILTQSGDGGFRAIITGCESRFELRKMI
EPHFPDLLVLSHNELPEEIPISLLGSVSDEVLAL
>CF0079 fliF1, type III secretion flagellar biosynthesis M-ring protein
MYRRSISWCLFFVMTLFCCTSCDSRSLIVHGLPGREANEIVVLLVSKGVA
AQKQPQAAASTGGGSTEQLWDIAVPAAQITEALAILNQAGLPRMKGTSLL
DLFAKQGLVPSEMQEKIRYQEGLSEQMASTIRKMDGIVDASVQISFTTEA
EENLPLTASVYIKHRGVLDNPNSIMVSKIKRLVASAVPGLSTENVSVISD
RASYSDITINGPWGLSDEIDYVSVWGIILAKSSLGKFRLIFYFLILTLFV
ISCGLLWVIWKTHTLILSLGGAKGFFDPSPYSKTALEAKKPEEGAGEKKE
GQAQPKQEETEGPKDNAPEAPEGNEENEDV
>CF0107 fliF2, type III secretion flagellar biosynthesis M-ring protein
MFFQFLKKKVASLGISPLGLLVISSALGSAIFFGKNTSKSPDFSPPSEKK
TTGWFKLSQVGNPKLLESLAKKEQIERDLTMFQSVASATVALSLPTEDDP
HIIPQVSVILSTRKNETFSSSLLHSITDYLSSSIPGLTKEHITLSDNLGN
VYSPGEISKNSLFLSTCEGYLGKIFPKEHFILSYLANNTPTIQLTINEKY
LAKFSKAKREAFLVHAEEHLKKIYGHTHSIVIERFPFSQTSKKDWLSYRL
LVGGTILLSSLGIIAVASFYLAFYAYERIPSESKKIKQGINITKLVEILQ
KESPEKIRLILSYLDPKKAEEIFKHLPEDIQHQVLKL
>CF0106 fliH, type III secretory flagellar biosynthesis
MSQSPGSLSDTEDAPEKTQDWQEGFSQGFSEGETLGYDKAFQELLSLIQI
FRKLSIRMLSEIEKIPQQLKPDLVELAILTCEKFLYKKLDNAEELALLIS
SALQQHTSLRSLSPVKIFLHPEDHKKLNDWIATHEIPMIKHAEFLPDISC
KKSSYKMEVPSGILRQEIGEELDHLLSVLTT
>CF0970 fliI1, type III secretory flagellar biosynthesis ATP synthase
MDELTTNFDTLMSQLNDVRLTTVVGRITEVVGMLIKAVVPDVRVGEVCLV
KRQGMEPLVTEVVGFTQHFAFLSPLGELTGVSPSSEVIPTGLPLYIRAGN
GLLGRVLNGLGEPIDSEIKGPLVDVNETYPVFRAPPDPLHREKLRTILST
GVRCIDGMLTVARGQRIGIFAGAGVGKSSLLGMIARNAEEADVNVIALIG
ERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAIAEYF
RDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLE
RSGASDKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYH
YPAIDVLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRR
GSDRGVDFAIDHIDKLNRFLKQDIHEKTNYEEASQQLRAIFR
>CF0105 fliI2, type III secretory flagellar biosynthesis ATP synthase
MIHLDHEKSQIQYWQPYRSCGLLSKVSGTLLEAQGLSACLGELCRVCTPK
YPDLLAEVIGFHNQTTLLMSLSPMHYVTLGSEVLPLRRPPSLHLSDHLLG
RVIDGFGNPLDNKENLPKTHIKPLISPPPLPMSRQPIQEIFPTGIKVIDA
FLTLGKGQRIGVFSEPGSGKSSLLSTIASGSKSTINVIALIGERGREVRE
YIEQHASGLQEHRTVIIASPAHETAPTKVMSGRAAMTIAEYFRDQGHDVL
FIMDSLSRWIAALQEVALATGETLAAHNYAAYVFHHVSEFTERAGNNDRG
SITALYAILHYPNHPDIFTDYLKSLLDGHFFLTNQGKALASPPIDILLSL
SRSAKKLSLPHHYAAAEKLRSLLKTYQEALDIIHLGAYTPGHDKDLDDAV
KILPNIKKFLAQPLSSYCQLENTLKELEALVELE
>CF0967 fliN, type III secretion flagellar motor switch domain
MAVAAEPSASWLKSRNDFLSSLVKTEEGVSLPPFPKELCLQKLREKFRLE
DTSLTIQPCGSLSAAQAVQDFGTHFLVQSFVAQPLESGNFFFVTSEADLQ
SFMVAVFNDSSLASYFYEKDKLLGFHYYFCAELCKFLQELAWIPSLSARV
VGDARFSSKDLQGSYQAVDVTCGLDGKYMRFRLLFPEAVCDSCKRFLSES
NQNFDIHQLGPTPLAMSVEIGYCQLTQDEWQQVVHGSFILLDSCLYDPDT
EESGGMLTIQGHQFFGGRFMDTTSGEFKITSYPNLQQEEPVEETSESLPA
APLPGNCKLVAEVSRYSLTVEEFLKLSQGSILNLNGVHPSRGVDLILNGA
KVGRGEIVSLGDVLGIRVLEV
>CF0077 fliO, type III secretion flagellar biosynthesis translocase
MKFFSLIFKHDEVAPNKKILAPEAFSALLDAKELLEKTKEDSESYTNETK
EECEELRKEAKEQGFKEGSEQWSSQLAYLAKEAHDLRNKVKEALVPLAIA
SVKKILGKELEIHPEAIVSIIAKALKELTQHKKIIIYVNPKDLPIVEQNR
PELKKIVEYADSLIIAPKADVTQGGCVIETEAGIVNAQLDVLLAALEKAF
STILKQQNPVDEPQPKQQAPVNNTQDKQE
>CF0076 fliP, type III secretion flagellar biosynthesis inner membrane protein
MRFIFRTFLCMFILSAPWCLADNGFYDSSCPSRCDVSKSTELSVVPPQPE
IKKTHPQPSFRERVTADDVLPQENLSAGSFSDTYPDLTTQAIILIFLALS
PFLVMLLTSYLKIIITLVLLRNALGVQQTPPSQVLNGIALILSIYVMFPT
GVAMYNDARKEIQGNAIPRDLFSAEGAETVFVALNKSKEPLRSFLIRNTP
KSQIQSFYKISQKTFPPEIREHLTVSDFVIIVPAFIMGQIKNAFEIGVLI
YLPFFVIDLVTANVLVAMQMMMLSPLSISLPLKLLLVVMVDGWTLLLQGL
MISFK
>CF0075 fliQ, type III secretion flagellar biosynthesis inner membrane protein
MIALAASFKSVLFEYSYQSLLLILIISAPPIILASIVGIVVAIFQAATQI
QEQTFAFAIKLVVIFGTLIISGGWLSNMIFRFASQIFQNFYKWK
>CF0074 fliR, type III secretion flagellar biosynthesis inner membrane protein
MAISLPELVSVFGSTYLDYILQKPPAYVWSVFLLLLSRLLPIFAIVPFLG
GKLFPAPIKIGIALSWVAIIFPKVLMSTHIANYLDDDIFYFLIIKELCIG
TLIGFILAFPFYAAQSAGSFITNQQGIQGLEGATSLISIEQTSPHGIFYH
YFVTIAFWLSGGHRIVLTILLQTLEVIPIHKFLPAEMMSLDAPVWIALIK
MCQLCLVMTIQLSAPAAVAMLMSDLFLGIINRMAPQVQVIYLLSALKAFM
GLLFITLAWWFIVKQIDYFTLAWFKETPIMLLGSSPKVL
>CF0228 ftsY, cell division related signal recognition particle GTPase
MFKFFSSKIQSLFKKALSADLLEFTESLFYEADFGSELTEELCSRLRKCR
KPDESTVKDLVSSLLRETLANLPIIKSEKDTPVVSLMLGTNGSGKTTTVA
KLAHYYLSRSEKVMIVATDTFRSAGMDQMRCWAEKLGCGFVSGKPGGDPA
AIAYDGIASAKSRGYDRVIIDTSGRLHTHTNLLNELSKIVSVCNKVHAGS
PHERLMTIDATLGGNVIEQVRVFHETIPLSGLILTKVDGSAKGGTLFRIA
KQLKIPTKFVGYGELIGDLEEFHIDRFLEKLFPSS
>CF0066 gspD, general secretion pathway protein D
MRFLRHPLVYFFGLSSLACCTPGQALTISEKAASLENSKEFIDSSPGLAS
FNADMKEYNLQLKSLYEEAAALREAGCEDEARWKLLLSKLTDVKKQIKRM
EDLWAAEIRERGENPDEYALWHHPETTIYNLVSDYGEDNVIYLVPQDIGS
IKVSALSKFTVPKEGFEECLLQLLSRLGIGMRQVSPWIKELYTTHKEGCG
VAGVFSSRKDLDLLPPSSYIGYVLNSKNIDVRADQHILRKFANLDTTHID
LFGGKLWVFGSVGEISELLKIYDFIQEDSVRQEYRVVPLTKIEASEMISI
LKAAFREDVTKEGDEEGLGLKVVPLQNQGRSLFLSGTAALVRQAVDLIKD
LEEGIENPTDKTVFWYSVKHSDPQELAVLLSQVHDVFAGKDGGGVPSSSA
ESMLRDAASTIHIDTSSVGATKEGSVKYGNFIADSKTGTLIMVVEKEALP
RIKMLLKKLDVPKKMVRIEVLLFERKLSSQRQAGLNLLRLGEEVCKKTSS
AVSWTSSGILEFLFKGSTGSSLVPSYDLAYQFLMAQEDVRINASPSVVTM
NQTPARIAIVEEMSIAVSADKEKAQYNRAQYGIMIKMLPVINVGEEDGKS
YITLETDITFDTTGKNTNERPDVTRRNITNKVRIPDGETVIIGGLRCKHA
SDSQDGIPFLGEIPGIGKLFGMNSTSDSQTEMFVFITPKILDNPAEKKER
QEEAILSSRPGENAEFRKALCAGEEAAKAAHKKLELISAIELPASQVEGL
EYDGR
>CF0067 gspE, general secretion pathway protein E
MMGGKALLSQELLNALPYSFLKKHCLLPLEEREDSVTMAYARASSLIAKD
EVQLLIKKPVFFVLKDEADILHRLQKIYSNLEGKASDMLLSMKDGSASQT
NEEEDLLESTDSVPVVRFLNLILKEAIEERTSDIHFEPLEDSLRIRYRID
GVLHDRLSPPAHLRSALITRIKVLAKMDIAEHRLPQDGRIKIQIGGQEID
MRVSTVPVIYGERVVLRILDKRNVILDISGLHMPEDIEQSFKEVVSVPEG
ILLVTGPTGSGKTTTLYSVIQHLSGPFANIMTIEDPPEYKLPGIAQIAVK
PKIGLSFACGLRHLLRQDPDVLMVGEIRDQETAEIAIQAALTGHLVVSTL
HTNDAISAIPRLLDMGVEPYLLSATIIGVVAQRLVRKICRHCKEQCAANI
QERVFLQSIGRDPDAPLFFGKGCSHCFRSGYKGRQGIYEFLHPDTALRSE
IAMHKPYHALREHAEQKGFQPLLHHGVSLALSGETTLAEVFRVTKRYD
>CF0068 gspF, general secretion pathway protein F
MPRYRYTYLNAKEQRKQDWLDAIHLQEAKEKLAQQGVQLLSIREVAPRRV
RVKNNELIVFSKQMLLLLRSGLPLYESLSSLRDQYQGQAMSGLLTAFMEN
LRSGGALSQAMAAYPDIFDNFYRSAILAGESVGNLEGCLQNIIVVLEERE
QMSKKLTAALSYPIVLLVFSLAVVLFFLTGVIPSLKETFENMEPNTLTSI
VFSLSDFVCKYKYLLFGILVSGITSIVITRRKLFWKKWFEKILFSLPGAR
NFFIKLGFSRFCSVVSAILRGGGTLIEGLELGCGAVPYDTLREDMKQMIH
AVVEGSSLSKELAKRPWVPKLALGMVSLGEESGELSEVLGHVAHIYNEDT
QKTLTWITSWCQPVILVFLGGIIGIIMLAILIPLTSNIQIL
>CF0338 htrB, acyltransferase
MLKNLHRGKQSIVDFFGYYLGISLIGILKRIPHSLLSRLGKALGSIVFYT
VPNYRKTALTNLALAFPDKSFTERRRIAKHSIQHVMITVLELLAVEGLIG
NLDNLISIATAETSPEGFCHDEVLTQEELEDTFSNLSNNEGIILFCGHQA
NWELPFLYITKDYPGLAFAKPIKNARLNQKIFSLREIFKGKIVSPKHGIH
SAIQALQKGHVIGIVGDQALLISPYSYPLFGNEAFTTTSPALLAYKTGKP
VVAVSVFRHNHGYTIVPSKKFYADKSLPIKDSVASLMNNLMRFLEKGIAY
QPQQWMWMHKRWKRKLYNKLKKKYAYSHILVIVNASDLENSKDFLIDLAE
LYSGSSLTLALYNPVNEKVPYEGLSSYIIKEFPSLSLLRSLPNSFPAIFD
LAELPKDLHKHFKNTGSIALYTRKTLRKKLPHPNASLITALSSVSKKSQT
IA
>CF0535 imp1, inner membrane protein
MNKRSLLFVSLVGAAFLGCQIFFGYNDFRSCKALTEKQKTITEQVLPATK
SMGLSVAPWTTSLGEETSKSQYAVRVGDRLLLLNQGGSANSIYSSGTRWD
FIEETTACDNIHVALYREAGESLASLSTGKVFLPVTKEGLPVLVVEFRNN
QEPVVFLGQYKQDQGKIYNKDSVVYGTSLVFWRSGNEYLLLGIYNSREER
LESLDLPITKAAIFRDSQSANVDTNSGQCFVLSNEYMQLVISQESGSIEG
INLPFSSENNRSIVNEIGFDRDLKSQVPSEASFPGLPSIGANNQAIPDSV
GGYYPLLRRGILSDSKKQTPMSYHALNVVSGRDLVNPVASGYRVSVFNSN
MLELESNDGSIKKTYKLPEQQPYSFEVSVGLTQANEDLWITSGIPEVEIM
SNAFTPAIKYHVIKKNKGQLDKVKLPKPKDPLALRSGVYPQWILNSNGYF
GIILSPLTDIPAGYAASYVPGSSVPTRLSLLSPKNQAYPASKYPGYETLL
PLPKQEGTYRFLVYAGPLAEPTLRALDQAYTNSKGESPQYLDCITFRGIF
AFITEPFAALLFIIMKFFRMITGSWGISIILLTVFLKLLLYPLNAWSIRS
MRRMQKLSPYIQEIQQKYKKEPKRAQMEVMALYKTNKVNPITGCLPLLIQ
LPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWTTPVWFIGNEF
HLLPILLGIVMFAQQKLSALKRKAPVTDQQRQQEAMGTMMALLFTFMFYN
FPSGLNIYWFSSMLLGLIQQWATNKILDSKHLKNEISISKKKQR
>CF0548 lcrD, type III secretory flagellar biosynthesis
MNKLLNFVSRTFGGDAALNMINKSSDLILALWMIGVVLMIILPLPPTIVD
LMITINLAVSVFLLMVALYIPSALQLSVFPSLLLITTMFRLGINISSSRQ
ILLKAYAGHVIQAFGDFVVGGNYVVGFIIFLIITIIQFIVVTKGAERVAE
VAARFRLDAMPGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMDG
AMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAHVYTLLSIGDG
LVSQIPSLLISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAA
TLGVGFFKGFPLWSFSILSFIFGLLGVILLAKKNSTAKKGASGASTTVGA
AADGAATAGDNPDDYSLTLPVILELGKDLSALIQHRTKSGQSFIDDMIPK
MRQALYQDIGIRYPGIHVRTDSPSLEGFDYMILLNEVPYVRGKIPPHHVL
TNEVEENLKRYNLPFITYKNAAGLPSAWVSEDAKTILEKAAIKYWTPLEV
IILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLT
EIFKRLVQEQISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISF
KFSQGQSAISVYLLDPEIEEMIRGAIKQTSAGSYLALDPDSVNLILKSMR
NTITPTPPGGQPPVLLTAIDVRRYVRKLIETEFPDIAVISYQEILPEIRI
QPLGRIQIF
>CF0575 lepA, GTP-binding protein
MKEYKLENIRNFSIIAHIDHGKSTIADRLLESTSTVEQREMREQLLDSMD
LERERGITIKAHPVTMYYNYNGEVYQLNLIDTPGHVDFSYEVSRSLAACE
GALLIVDAAQGVQAQSLANVYLALERDLEIIPILNKIDLPAANPEKIRKQ
IEDYIGLDTTHAIACSAKTGEGISEILEAIINLIPPPTPPQETELKALIF
DSHYDPYVGIMVYVRVISGEIKKGDRITFMATKGSAFEVLGVGAFLPEAT
LIEGSLRAGQVGYFIANLKKVKDVKIGDTVTTVKHPAKVPLDGFKEINPV
VFAGIYPIDSSDFDTLKDALSRLQLNDSALTIEQESSHSLGFGFRCGFLG
LLHLEIVFERIIREFDLDIIATAPSVIYKVVLKNGKTLLIDNPTAYPDPS
IIEHMEEPWVHVNIITPQEYLSSIMNLCLDKRGVCLKTEMLDQHRLVLSY
DLPLNEIVSDFNDKLKSVTKGYGSFDYRLGDYRKGAIIKLEILINDEPVD
AFSCLVHRDKAEARGRSICEKLVDVIPQQLFKIPIQAAINKKVIARETIR
ALSKNVTAKCYGGDITRKRKLWEKQKKGKKRMKEFGKVSIPNTAFIEVLK
ID
>CF0348 lepB, signal peptidase I
MKYRYSLNKSRQVLRSTYQLLKNKKLSQHPESKKELQTLLEQLEDAIFQQ
DQETASQLAKQAQQFAKHYPASFAKKSWELTKAILFAAVVAFLIRQFWFE
LYEVPTGSMRPTILEQDRMIVSKTTFGLHFPFNKKPWGFRPEAVTRGGLV
VFTVGDLPIPNSDTKYFGFIPGKKRYIKRCMGKPGDTLYFYGGKIYGLDK
DNKIIHFPTTFGLENLYHVPYISFDGSVEIVNSDKSSAYFKQMNQPCGKI
SLPQEGTYGKFFHNNAWHNDIPNGLKTPHPSPVSYSDLFGMGNYAMVRIL
THKQASLCHTLQTPTAQTYLEICHTPNVSYPKPHLQHYNNQIVPTIQPMK
TLLPLRQEHIHLIRNNLTTSRFIISDGVAYKYQPFAPGAERTAKLFALPF
PGVDNGCYEYSKGEAYKIGFGGMRQKLKPTHALMQLNDNQVIDLFNCGIN
FSSFFIPKNPKYNPLPSRYAFYNQGNLYVMDSPIFIKNDPALQKFVESEK
AKQEASSEERPYIGFIDRGPPPQDLEQFSEFIRNFGIRIPEGHVLVLGDN
YPMSADSREFGFVPLENLLGSPLWIFWPLGHFGHLKNVPAPTTLPGYLVN
GLALGFFICLFGHMYYQRHRRLFPRNEKKQ
>CF0797 lspA, lipoprotein signal peptidase
MSNRSRSTLLTISFFVLIDWVTKLAVLLYRGNLPNANPILYQYSWGKLFF
CICPTFNEGAAFGLFSKYKYFLLLIRIVIILGILAFLFLRKKKTSATTRF
SLILLCSGAIGNVGDIFFYNHVIDFISIGYNRWSFPTFNFADIFISLGTL
IFVYKLYFPTKQKIK
>CF0859 lysM, LysM motif repeat domain
MAVQKTTRWLWQALILSAVLNIVFLLLFYSTIFRKDIYKLRLFSGPLVAK
SCRVQRIPEDFLDQLSEASLEELYRLLDEDHLLYGYPLKLWALSVAIHTY
DVDVGGALSHPLTFTQLRSRGKTWLLPNVDEREYSLIRRYLTYERYPFTS
RGLFVSISKHLEQGIVDEDCLYHFCHTPEFLYLRTLLCGADEQVSSVASL
AKMVICNGKGVFFSLCNEHNRATNISDRQRQKVLSTYMSLGEPLAALLLL
VHDEDWVIHEFTDEALKTFISLLPKESPYSQNFISRVSSSPRSYSVSEEN
TIETLASDAQKAVEEEYIVKDGDSLWLIARRFGVTVEEIMLVNHMSHHRL
LPGKCLKIPPKSS
>CF0150 nlpD, cell wall binding muramidase
MNRRDTIIIATLVNVVLVLVLFTTAKQADKKNADVLLPPLPTKLVEVVPP
SVEKVQEKVEKVEKPVIESVPQRVSKEEMAAQFSENKPVVVKASPAPTIP
QITAPVPVANPAPAEPKVQVAKETPKKEGYATVIVKKGDFLERIAKANHT
TVAVLMQINDLSSTQLKIGQILRVPVSDKQEETKNPQVKVAKPEDFYTVQ
EGDSPWTIALRNHIRLEDLLKMNDLDEQKARKLRPGDQLRIR
>CF0069 omp02, outer membrane protein
MGQKIMKKQRRKQSITLIEMMVVITLIGIVGGALAFNMRGSIQKGKVFQS
EQNCAKVYDILMMEYASGGASLREIVDQKESVLDGAAWCKDGKKLLKDAW
GEDIVVKVNDKGDDLIVFSQRALGTNSKRG
>CF0089 secA1, preprotein translocase secA subunit
MLDFLKRFFGSSQERTLKKFQKLVDKVNLYDEMLAPLSDEELRNKTGELK
KRYQEGESLDDMLPEAYAVVKNVCRRLTGTPVEVSGYHQNWDMVPYDVQV
LGAIAMHKGFITEMQTGEGKTLTAVMPLYLNALTGKPVHLVTVNDYLAQR
DCEWVGSILRWLGLTTGVLISGSPLEKRKEIYRCDVVYGTASEFGFDYLR
DNSIATSVDEQVGRGFYFAIIDEVDSILIDEARTPLIISGPGEKHNPVYF
ELKDKVAELVQLQRELCNQLALEARRGLEHFLDMDILPKDKKVIEGISEF
CRSLWLVSKGMPLNRVLRRVREHPDLRAMIDKWDTYYHAEQNKEESIEKL
SQLYIIVDEHNNDFELTDRGMQQWVEKAGGSAEDFVMIDMGHEYALIDSD
ESLSPTDKINRKIAVSEEDTQRKARAHGLRQLLRAHLLMERDVDYIVRND
QIVIIDEHTGRPQPGRRFSEGLHQAIESKEHVTIRKESQTFATITLQNFF
RLYEKLAGMTGTAITESKEFKEIYNLYVLQVPTFKTCLRIDHNDEFYMTE
REKYHAIVNEIARIHKDGNPILIGTESVEVSEKLSRILKQNRIEHTVLNA
KNHAQEAEIIAAAGKLGAVTVATNMAGRGTDIKLDEEAVVVGGLHVIGTS
RHQSRRIDRQLRGRCARLGDPGAAKFFLSFEDRLMRLFASPKLNALIRHF
RPPEGEAMSDPMFNKLIETAQKRVEARNYTIRKHTLEYDDVMNKQRQTIY
AFRNEVLRSEDIFALAKESINHVALMIASLIMSREHPAGHSLPILEEWMN
YSFPLQLNIEELRRLPSLDAIAEKVADELTGAFQNKFSSMVEEITAAAGN
DVDANGICKDIIRSVMIMHIDEQWKIHLVDMDLLRSEVGLRTVGQKDPLL
EFKHESFLLFESLIRDIRIAIVKHLFRLELTMTREQRPQNVIPVVATSFQ
NDENFGPMELTIISDSDDE
>CF0828 secDF, protein export proteins SecD/SecF fusion
MKQRFGRNLSIIICVFGLALYYVLPTCLYYSRPLNKKIDEKEAQQIVRRL
TKQVAEARSDIIPRVSSVLSALKLRGHITQHPSIPGVVNVHFKDRADAYT
FLENMVYGEPTVPIKSSRLYVLGYDKKDGNVVQVTGSLTTALTEKDFSFV
SYNREDTESGREILNTAAALITLAPSGACSCGYTSIWNTASIEKVVQLAN
NLASGLDIFPASKTSALLNYFFSSEKDYSAFLTRLENLSSDSTLSEQQQS
VLRDEFQHLKARVQRWKKSTMSLVDNSLNCSAVSPFFSSIEFFAKERKLV
FRLDPRVLAKRDELSAEQRLDFDSWLGREKQRLAHRLQKSAQESSQEFAF
NLSDKDTSGKIVLHGQRIYQGTVEHLATLALNRPPAQSCDLIREHFPIYC
RLPKESDSFGCFIFSPEKSCAHFSQGSVYVVLKGLRSVAAKYEKGTEEEA
KIFDQDLQNLYNCFAHTDVTPWSIGDDEVLEIKEPLQRFFDVWGENFVVD
SEGKTASLEVRDVRDRLETLNCIEKHRQEELVRWHEQYRQSSCSIDPQLR
IRAAVPHRNAFLENLKLNIRKYSRGDSVLRLGIDFIGGKQIRLAFKDHQG
KPIADKEDILKVSDELYARLNKLGVAEVEIRREGDNVYLSVPGSEKISSE
EILGTSQMTFHVVNEKFSYYSALRYEVQRFLDYLWFTAQSQEATSPEAIN
KLASYIFNNQEIRLPTSVRDAITKLQQEGLAFPEVGSDAPSSHLDTTYSM
IAIKKDREDKANPLMIVFRNYALDGASLKNIRPEFAISEGYILNFSVKDS
TIAQKAHNVSPTESFHAWTAAYCQEGINGTTNSQYSSGRGWRMAVVLDGY
VVSDPVLNAPLKDHASVSGKFSHREVNRLATDLKSGSMSFVPEVLIEEVI
SPELGKQQRTQGIISILLGLAVLIILMSVYYKFGGVIASGAVILNLLLIW
AALQYLDAPLTLTGLAGIVLAMGMAVDANVLVFERIREEYVLSRSLSQSV
EAGYKKAFGAIFDSNLTTVLASLLLLILDTGPIKGFALTLIIGIFSSMFT
ALFMTKFFFMVWMNKTQETQLHMMNKFIGIKHDFLRECKRLWMVSGSVIS
LGCVALGFGAWHSVLGMDFKGGYALTLNMAEQKSVDVTQFRHTLGDKFKQ
VGLSSRDFKITTFDSSEKIKIYFSQNALARVQAPEIKVTEAFDPHLSVVM
GILSDTGIDISSDSFKDTQNFWFKVSSQFSNKMRKQAFIALMGALFIILL
YVSLRFEWRYAFSAICALIHDLVATCAVLVATHFFLKKIQIDLQAVGALM
TVLGYSLNNTLIIFDRIREDRQEKLFTPMPILINDALQKTLGRTVMTTAT
TLSVLLILLFVGGGSIFNFAFIMTIGILLGTLSSLYIAPPLLLFMVRKEE
RQRL
>CF0314 secE, preprotein translocase SecE chain
MKQRTHQKTLSKIIAKAKKQEGSGFLDEIKKIEWVNKRDLKRYVKIVIAS
IFGLGFSIYCVDLVFRKLLTLLSSITSFLFG
>CF0895 secY, preprotein translocase SecY chain
MTTLRQIFSIAELRQKLFFTFALLAACRVGVFIPVPGINGERAVAYFKQL
LGSSQNLFQLADIFSGGAFAQMTVIALGVVPYISASIIVQLLLVFMPSIQ
REMRESPDQGKRKIGRLTRLFTVGLAFIQSLLFAKFALKMNMSIPGIVLP
TLLSSKLFGGPWIFYMTTVIVMTTGTLLLMWIGEQISDKGIGNGVSLIIS
LGILASFPSVLGSIVNKLNLGSQDPSQLGLFSLLLLCFIFVFVLVTTILI
IEGVRKIPVQYARRVIGRREIPGGGSYLPLKVNYAGVIPVIFASSLLMFP
ATIGQFMSSDSSWLKRIAMMLSPGGWVYSLCYVLLIIFFTYFWTATQFHP
EQIASEMKKNNAFIPGIRQGKPTQTYLEYTMNRVTLLGAVFLAVIAILPS
ILGRVLHVDANVSYFLGGTAMLIVVGVVLDTMKQVDAFLLMRRYDSFLKK
DRPKGRH
>CF0879 sppA, periplasmic serine proteases IV
MLRVFMKTFWHFLSKGFLAIVGLSLGVILAFLVTVMLVVSTSGMNDSQFV
NMPDARGEVKDLGKDAPIIAVLEMKDVISSAKHTARILQDAITTLDSAPY
KDRVKGIIIDMDCPGGEVFEIARTYSVIQFWKQRTNCPIYVFVNGLCASG
GYYVACAADKIYSTSSSLIGSVGVLSGPYFNVKEGLSRYGVQSDLLTAGK
DKAPMNPYTEWTTKDREIRQEVINYLYGQFVDVVVTNRPLLTKDKLVSVL
GARLYSPEKALEEGYVDVVNVTKQQVIQDLVSDCKIENNYRVIGLGSDGW
LKKVMSSITNSPLITGKIQHELLPNLENSTSTFYYLAS
>CF0605 tlyC1, hemolysin
MISTLLIFLIICFTLCSGFVSLSQIALFSLPTSLISHYKRSRHKKQQLVA
SLLSHPHHLLITLIFLDIGLNIGIQNCVAILVGDKASWLIIVGFPLALTL
ILCEILPKAVALPYNTQIASFVAPLILVFTKVLRPLLYWAISGINYVVQW
ILSSQKTDIIQPQELKEVLQSCKDFGVVNQEESRLLYGYLSLSDCSVKER
MKPRQDVLFYDIQTPLDNLYDLFSRQHCSRVPVCNDNLQNLLGICTAKAL
LLYGKPLQSSEDLLPLLNKPYYMPETISAKTALCHLAAEDETLGMIIDEY
GSIEGLITQEDLFEIVSGEIIDQRSEKVLYTMSGKDVIIAAGTLELSDLS
EIFNINLPTYTNSATLGGWLTEQMESIPITGTKLMWKNLMFQVLDAAPNR
IRRVYIRKMHD
>CF0606 tlyC2, hemolysin
MTDSPFFWLGVNFLCIVLQGFYSMMEMACVSFNRVRLQYYLTKDHKKARY
INFLIRRPYRLFGTVMLGVNITLQVGSESSRNCYKALGFSPDYAPFTQIF
LVVIFAELLPLTISRKIPERLALWGAPILYYSHYLFYPLIQFIGSLTEGI
YYLLKIKKEKLNSTLSRDEFQKALETHHEEQDFNVIATNIFSLSATSAEQ
VCQPLDQVTMLPSTANVKDLRRKIKSTDMEFIPVYHKVRKNVIGIALPKD
FVNKSPEDSLIHNLHSPWFITAKSKLIRILKEFRDNRSSVAVVLNSSGEP
MGILSLSAIFNILFNTSNIAQLKPKTVSVIERTFPGNTPLKDLQKELGIE
LTRYGVETLAQLVLQLLDTPAEIGTSVITDNLLLEVKEVSLYGIKSVSIK
NLLS
>CF0772 tlyC3, hemolysin
MRFYQIKMLDFLLAISLLVLLFSTALTQKSVKTQEDDTLHRHPSQSNTPA
LLASVLLCLYGIIGVSIYSQYKFTTKGLTQCFWAAYVLAAPLAYGFLPYS
IKLHKGIVSALCCISSLLQAFFLPLQRSIHNEEKDPKPSSSEMENQMTEA
ISSFDKLIVREIMIPKVDIFAIQEDTPIRNAFPAIIEEGYSRIPLYKKNI
DNITGILLVKDLLANPQSANSSQPVSSVAKSPIYAPEIKKVSSLLQEFRQ
KHRHLAIVVNEYGVTEGIISMEDIIEEIFGEIADEYDVQEDIPYKKVGNS
WIVDGRMNISDAEEYFNLKIHHENSYDTLGGHVFHKVGAVPQKGMKIHHE
NFDIEIITCSERSVGKLKITPRKKKFSPS
>CF0038 tolB, tolB protein precursor
MSLNTVGAIGMLRRLFVSTFLIFGMVSLYAKDLEVSVRSENTLLPIHVEL
NIGPNDAKQTKYLRSLCSIFVKDLALGDRLQPLLVKSGEISAPFSIVISS
HYPELVFTLSRGTHNPRPFHSLVLTEDIAINRQKIHEVADKIHYALTRVP
GISSGKIVFSLSKNPHDGELKQGELWSVDYDGENLRALTQENSLSITPNW
LNIGSNNPYFYVSYKFGIPKIFLGSLENTSGKKVLNLQGNQFMPVFSPRK
KQLAFISDAYGNPDLFLQGFSPSQGAMGKPRRVLNESFGTQGNPSFSPDG
SKLVFVSNKDGRPRLYIIQVDPEIQTPRLLTKKYRNSSCPSWSPDGKKIA
FCSVIKGVRQICLYDLSTGKDYQLTTTPIDKEGPSWAIDSHHLVYSAGNS
GESELYLLSLITQKTNKIVIGLGEKRFPSWGGFPNNQ
>CF0041 tolQ, biopolymer transport proteins
MLQLSHNPIIQAYREADLFGKGIFFSLLILSLCTWTVLHQKLAIQKKFLK
SGKSLKDFLIKNRHAPLSLEIHPELNPFADLYFTIKRGALELLDKNRQQA
PDHGPVLSMEDIQSLETLLGAIMPKYRAIMHENNFIPATTISLAPFLGLL
GTVWGILVAFSHISTGHAGGTAMMEGLATALGTTIVGLFVAIPSLIGFNY
LKAHSSRLILEIEQTAYLLLNSIEVKYRQTNL
>CF0131 yajC, preprotein translocase
MFSRLFPCFLFLMSTSTLLADEDGSQVKSTFAQPAVMLGIAILFFYFILW
RPEQKRRKAMEKRKNELAKGDKVTAMGILGTIDEIREHTVVLNIASGKIE
ILKAAISEILKPDGTKA
>CF0791 ycaH, tetraacyldisaccharide 4'-kinase
MISELQRKLMKTRLPSPFFILYRRLTVAISFGKILGWGYLGRVLSWIFAR
TASFRRKLLFSAPYRSSSTVISVGNIVLGGAGKTPTVLWLAEALKARGYS
CAVLSRGYKGKCSRQGKLTIVNPETHDAAYVGDEPLLMAKKLSKGSVFVH
KDRRVAAKEASRNFDILILDDGFQNQKLHKDMEIVVVNGQDPLGGEAFFP
RGRLRDFPQRLGEADAVIVNGSCSVENQKRLNTWCTSPKIFVEPRISQIL
WAPSGEQLSLDSLSGLAAGVFCGLGFPQGFLDMLKRAGVKILGTYLLPDH
AGITKKELHYFCSKIAMRQGQGILCTEKDSMNLGNLIHEPGMLPIGMVQM
HFDFIDLEGSTASLLDRIDQIHNGKR
>CF0965 yscC, type III secretion general secretion pathway protein D
MKIVTSNIGRKILQVINKKKGKIGILSVLFFLDLVLLGVNSQKPPNNELR
PRNKNSQADENNQIAACPKNIINKTSAKKSDPQTIAKSLPQNQPRHFKKS
SQIFSPGFSEGSPFAKPEVKQRPQERYAQAAAKRTPRFLPKQEEKTEVAE
EKSEEAQIWEDKRAYAKRAVNAINFSVKKLVEESEKKSSQEEGFKIDNGA
SSSQSLKIKSPEKQPSIEKIAIHPETKKEDEQAPSLLKGKQITCEDLKDN
GYTVNFEDISVLELLQFVSKISGTNFVFDSNDLNFNVTIVSHDPTSVDDL
STILLQVLKMHDLKVVEQGNNVLIYRNPRLSKLSTVVTDGSAKDNCEAVV
VTRVFRLYSVHPTSAVNIIQPLLSHDAIVSASEATRHVIVSDIAGNVEKV
GELLAALDSPGTSVDMSEYEVRYANPASLVSYCQDVLGAMSEDEAFQIFI
QPGTNKIFVVSSPRLTNKAVQLLKSLDVPEMAHTLDDVTSPAAALGSSGA
ANPKSLRFFMYKLKYQNGAAIAQAIQDIGYNLYVTTAMDEDFINTLNSIQ
WLDVNNSIVVIGNQANVDKVVSLLNGLDLPPKQVYIEVLILETSLEKSWD
FGVQWVALGDEQGKVAYASGLLSNTGISNPTKSTIPPAKPSPGDIPLPTP
GQLAGISDMMYASSAFGLGIIGNVLSHKGKSFLTLGGLLSALDQDGDTVI
VLNPRIMAQDTQQASFFVGQTIPFQTTSTIIQETGTVTQNIEYEDIGVNL
VVASTIAPNNVVTLQIEQTISELHSAQGTLTPVTDKTYAATRLQVPDGCF
LVMSGHIRDKTTKIVTGVPLLNSIPLIRGLFSRTIDQRQKRNIMMFIKPK
VISSFEEGTTLTNKEGYRYNWEADEGSMQVEPRHAPECQHTPAVQAESDF
KMLEIEAR
>CF0547 yscU, type III secretory flagellar biosynthesis Yop translocation protein U
MGEKTEKATPKRLRDARKKGQVAKSQDFPSAITFIVSMFTTFYLSSFFAK
HLGSFLVSIFKEAPINHDPRVTLYYLQNCLTLILTTSLPLLGAVGFVGII
VGFLVVGPTFSTEVFKPDLKKFNPIENLKQKFKMKTLIELLKSVLKIFGA
ALILYVTLKNRVPLIIETAGVSPLVIAAIFKQILYKAVTSIGIFFLVVAV
LDLVYQRKNFAKELKMEKFEVKQEFKDTEGNPEIKGRRRQIAQEIAYEDT
SSQIKHASAVVSNPKDIAVAIGYMPEKYKAPWIIAMGINLRAKRIITEAE
KYGIPIMRNVPLAHQLWDEGKELKFIPESTYEAIGEILLYITSLNAQNPN
NKNINQHDNL