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2024-05-28 01:23:47

Gene list

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COG category: Cell motility
Organism: Yersinia pestis KIM, KIM

Number of genes found: 132

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Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA unknownSubName: Full=Uncharacterized protein; pMT1 CDS19030 747 - 0.535475
NA phage lambda host specific protein JSubName: Full=Phage lambda host specific protein J; pMT1 CDS6571 4479 - 0.52735
HAP1 putative flagellar hook-associated proteinSubName: Full=Putative flagellar hook-associated protein; chromosome CDS3832740 1362 - 0.451542
caf1A F1 capsule anchoring proteinRecName: Full=F1 capsule-anchoring protein; Flags: Precursor; pMT1 CDS67669 2502 - 0.396083
caf1M Caf1MRecName: Full=Chaperone protein caf1M; AltName: Full=Capsule protein fraction 1; Flags: Precursor; pMT1 CDS70195 777 - 0.405405
cheA sensory transducer kinaseSubName: Full=Chemotaxis protein CheA; EC=2.7.3.-; SubName: Full=Sensory transducer kinase; chromosome CDS2011055 2172 + 0.501842
cheB protein methylesteraseRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase; EC=3.1.1.61; chromosome CDS2030847 1053 + 0.530864
cheR protein glutamate methyltransferaseRecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; chromosome CDS2029963 888 + 0.502252
cheW positive regulator of CheA protein activitySubName: Full=Chemotaxis protein CheW; SubName: Full=Positive regulator of CheA protein activity; chromosome CDS2013389 498 + 0.473896
cheZ chemotactic response; CheY protein phophataseRecName: Full=Protein phosphatase CheZ; EC=3.1.3.-; AltName: Full=Chemotaxis protein CheZ; chromosome CDS2032399 645 + 0.489922
ecpD probable pilin chaperoneSubName: Full=Probable pilin chaperone; SubName: Full=Putative chaperone protein; chromosome CDS2064363 780 + 0.441026
ecpD probable pilin chaperoneSubName: Full=Probable pilin chaperone; SubName: Full=Putative pili chaperone protein; chromosome CDS1706449 780 + 0.411538
fimD outer membrane usher protein FIMD precursorSubName: Full=Outer membrane usher protein FIMD; SubName: Full=Putative outer membrane usher protein; chromosome CDS389158 2628 - 0.471081
flgA putative flagella basal body P-ring formation proteinSubName: Full=Flagella basal body P-ring formation protein FlgA; SubName: Full=Putative flagella basal body P-ring formation protein; chromosome CDS2772500 765 + 0.517647
flgB cell-proximal portion of basal-body rod proteinRecName: Full=Flagellar basal body rod protein FlgB; chromosome CDS2771914 414 - 0.502415
flgC flagellar biosynthesis protein, cell-proximal portion of basal-body rodSubName: Full=Flagellar basal-body rod protein FlgC; SubName: Full=Flagellar biosynthesis protein, cell-proximal portion of basal-body rod; SubName: Full=Putative flagellar basal-body rod protein; chromosome CDS3839945 426 - 0.528169
flgC cell-proximal portion of basal-body rod proteinSubName: Full=Cell-proximal portion of basal-body rod protein; SubName: Full=Flagellar basal-body rod protein FlgC; chromosome CDS2771504 405 - 0.540741
flgD basal-body rod modification proteinSubName: Full=Basal-body rod modification protein; SubName: Full=Basal-body rod modification protein FlgD; chromosome CDS2770812 678 - 0.529499
flgE putative flagellar hook proteinSubName: Full=Flagellar hook protein FlgE; SubName: Full=Putative flagellar hook protein; chromosome CDS3837990 1242 - 0.509662
flgE hook proteinSubName: Full=Flagellar hook protein FlgE; SubName: Full=Hook protein; chromosome CDS2769324 1287 - 0.508159
flgF cell-proximal portion of basal-body rod proteinSubName: Full=Cell-proximal portion of basal-body rod protein; SubName: Full=Flagellar basal-body rod protein FlgF; chromosome CDS2768673 630 - 0.579365
flgF putative flagellar rod proteinSubName: Full=Putative flagellar rod protein; chromosome CDS3837259 732 - 0.554645
flgG flagellar biosynthesis protein, cell-distal portion of basal-body rodSubName: Full=Flagellar basal-body rod protein FlgG; SubName: Full=Flagellar biosynthesis protein, cell-distal portion of basal-body rod; SubName: Full=Putative flagellar basal-body rod protein; chromosome CDS3836406 786 - 0.522901
flgG cell-distal portion of basal-body rodSubName: Full=Cell-distal portion of basal-body rod; SubName: Full=Flagellar basal-body rod protein FlgG; chromosome CDS2767994 699 - 0.516452
flgH putative flagellar l-ring proteinRecName: Full=Flagellar L-ring protein 1; AltName: Full=Basal body L-ring protein 1; Flags: Precursor; chromosome CDS3835706 666 - 0.53003
flgH basal-body outer-membrane L (lipopolysaccharide layer) ring proteinRecName: Full=Flagellar L-ring protein 2; AltName: Full=Basal body L-ring protein 2; Flags: Precursor; chromosome CDS2767161 732 - 0.52459
flgI putative flagella basal body proteinRecName: Full=Flagellar P-ring protein 1; AltName: Full=Basal body P-ring protein 1; Flags: Precursor; chromosome CDS3834517 1176 - 0.542517
flgI homolog of Salmonella P-ring of flagella basal bodyRecName: Full=Flagellar P-ring protein 2; AltName: Full=Basal body P-ring protein 2; Flags: Precursor; chromosome CDS2766037 1110 - 0.545946
flgJ flagellar biosynthesis proteinSubName: Full=Flagellar biosynthesis protein; SubName: Full=Flagellar protein FlgJ; chromosome CDS2765093 945 - 0.540741
flgK flagellar biosynthesis protein, hook-filament junction protein 1SubName: Full=Flagellar biosynthesis protein, hook-filament junction protein 1; SubName: Full=Flagellar hook-associated protein 1; chromosome CDS2762701 1665 - 0.500901
flgL flagellar biosynthesis protein, hook-filament junction proteinSubName: Full=Flagellar biosynthesis protein, hook-filament junction protein; SubName: Full=Flagellar hook-associated protein 3; chromosome CDS2761582 1014 - 0.476331
flgM anti-FliA factorSubName: Full=Anti-FliA factor; SubName: Full=Negative regulator of flagellin synthesis; chromosome CDS2773415 303 + 0.475248
flgN flagellar biosynthesis proteinSubName: Full=Flagella synthesis protein FlgN; SubName: Full=Flagellar biosynthesis protein; chromosome CDS2773733 444 + 0.488739
flhA flagellar biosynthesis proteinSubName: Full=Flagellar biosynthesis protein; SubName: Full=Flagellar biosynthesis protein FlhA; chromosome CDS2779066 2079 - 0.518037
flhB putative flagellar biosynthetic proteinSubName: Full=Flagellar biosynthetic protein FlhB; SubName: Full=Putative flagellar assembly protein; SubName: Full=Putative flagellar biosynthetic protein; chromosome CDS3853214 1134 + 0.446208
flhB flagellar biosynthesis proteinSubName: Full=Flagellar biosynthesis protein; SubName: Full=Flagellar biosynthetic protein FlhB; chromosome CDS2781144 1161 - 0.525409
fliD filament capping proteinSubName: Full=Filament capping protein; SubName: Full=Flagellar hook-associated protein 2; chromosome CDS2730463 1401 + 0.465382
fliE basal-body componentRecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS2739174 318 - 0.493711
fliF putative flagellar M ring proteinRecName: Full=Flagellar M-ring protein; chromosome CDS3846490 1641 - 0.502133
fliF basal-body MS (membrane and supramembrane)-ring and collar proteinRecName: Full=Flagellar M-ring protein; chromosome CDS2739838 1713 + 0.532983
fliG flagellar motor switch proteinRecName: Full=Flagellar motor switch protein FliG; chromosome CDS2741547 993 + 0.521652
fliH flagellar assembly proteinSubName: Full=Flagellar assembly protein; SubName: Full=Flagellar assembly protein FliH; chromosome CDS2742511 738 + 0.550135
fliI flagellum-specific ATP synthaseSubName: Full=Flagellum-specific ATP synthase; SubName: Full=Putative type III secretion system ATP synthase; EC=3.6.3.14; chromosome CDS594314 1338 + 0.575486
fliI flagellum-specific ATP synthaseSubName: Full=Flagellum-specific ATP synthase; chromosome CDS2743187 1479 + 0.54902
fliI flagellum-specific ATP synthaseSubName: Full=Flagellum-specific ATP synthase; SubName: Full=Putative flagellum-specific ATP synthase; EC=3.6.3.14; chromosome CDS3843421 1341 - 0.580164
fliJ flagellar fliJ proteinSubName: Full=Flagellar fliJ protein; SubName: Full=Flagellar protein FliJ; chromosome CDS2744765 447 + 0.478747
fliK flagellar hook-length control proteinSubName: Full=Flagellar hook-length control protein; SubName: Full=Flagellar hook-length control protein FliK; chromosome CDS2745208 1353 + 0.552846
fliL flagellar biosynthesisSubName: Full=Flagellar biosynthesis; chromosome CDS2746728 570 + 0.484211
fliM flagellar motor switch proteinRecName: Full=Flagellar motor switch protein FliM; chromosome CDS2747303 1002 + 0.50499
fliN flagellar motor switch proteinSubName: Full=Flagellar motor switch protein; SubName: Full=Flagellar motor switch protein FliN; chromosome CDS2748301 417 + 0.494005
fliO flagellar biosynthesis proteinSubName: Full=Flagellar biosynthesis protein; chromosome CDS2748717 537 + 0.577281
fliP flagellar biosynthesis proteinSubName: Full=Flagellar biosynthesis protein; chromosome CDS2749250 825 + 0.513939
fliP flagellar biosynthesis proteinSubName: Full=Flagellar biosynthesis protein; SubName: Full=Flagellar biosynthetic protein FliP; SubName: Full=Putative flagellar assembly protein; chromosome CDS3851390 771 + 0.514916
fliQ flagellar biosynthesis proteinSubName: Full=Flagellar biosynthesis protein; SubName: Full=Flagellar biosynthetic protein FliQ; chromosome CDS2750180 270 + 0.522222
fliR putative flagellar biosynthetic proteinSubName: Full=Putative flagellar biosynthetic protein; chromosome CDS3852435 780 + 0.475641
fliR flagellar biosynthesis proteinRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS2750452 783 + 0.496807
fliS repressor of class 3a and 3b operons (RflA activity)SubName: Full=Flagellar protein FliS; SubName: Full=Repressor of class 3a and 3b operons (RflA activity); chromosome CDS2731874 399 + 0.466165
hofB putative integral membrane proteinSubName: Full=Putative integral membrane protein; chromosome CDS847025 1557 - 0.460501
hofC putative integral membrane proteinSubName: Full=Putative integral membrane protein; SubName: Full=Putative type II secretion system protein; chromosome CDS845829 1200 - 0.455
hofF putative general protein secretion proteinSubName: Full=Putative general protein secretion protein; chromosome CDS3521012 1047 - 0.344795
hofG putative general protein secretion proteinSubName: Full=General secretion pathway protein G; SubName: Full=Putative general protein secretion protein; chromosome CDS3520555 438 - 0.394977
lfgA putative flagellar proteinSubName: Full=Putative flagellar protein; chromosome CDS3840808 918 + 0.486928
lfgB putative flagellar rod proteinRecName: Full=Flagellar basal body rod protein FlgB; chromosome CDS3840373 447 - 0.463087
lfgD putative flagellar assembly proteinSubName: Full=Basal-body rod modification protein FlgD; SubName: Full=Putative basal-body rod modification protein; SubName: Full=Putative flagellar assembly protein; chromosome CDS3839286 657 - 0.512938
motA proton conductor component of motorSubName: Full=Chemotaxis MotA protein; SubName: Full=Proton conductor component of motor; chromosome CDS2008877 888 + 0.48536
motB lateral flagellar motor proteinSubName: Full=Chemotaxis MotB protein; SubName: Full=Lateral flagellar motor protein; chromosome CDS2009761 1284 + 0.490654
papC putative outer membrane usher proteinSubName: Full=Outer membrane usher protein; SubName: Full=Putative outer membrane usher protein; chromosome CDS3862332 2481 - 0.503023
ppdD prelipin peptidase dependent proteinSubName: Full=Prelipin peptidase dependent protein; SubName: Full=Putative prepilin peptidase dependent protein D; chromosome CDS848556 465 - 0.447312
psaB pH 6 Antigen chaperone proteinRecName: Full=Chaperone protein PsaB; Flags: Precursor; chromosome CDS3183531 822 - 0.377129
psaC outer membrane usher proteinRecName: Full=Outer membrane usher protein PsaC; Flags: Precursor; chromosome CDS3180976 2514 - 0.492045
smfA fimbrial A protein precursorSubName: Full=Fimbrial A protein; SubName: Full=Putative mannose-resistant/Proteus-like fimbrial protein; SubName: Full=Putative mannose-resistant/Proteus-like fimbrialprotein; chromosome CDS1761515 531 + 0.463277
tap methyl-accepting chemotaxis protein IV, peptide sensor receptorSubName: Full=Methyl-accepting chemotaxis protein IV, peptide sensor receptor; chromosome CDS2028195 1611 + 0.509001
tsr methyl-accepting chemotaxis protein I, serine sensor receptorSubName: Full=Methyl-accepting chemotaxis protein; SubName: Full=Methyl-accepting chemotaxis protein I, serine sensor receptor; chromosome CDS2026338 1674 + 0.480287
tsr methyl-accepting chemotaxis protein IISubName: Full=Methyl-accepting chemotaxis protein II; chromosome CDS4527920 1950 + 0.492308
y0066 putative solute-binding periplasmic protein of ABC transpoterSubName: Full=Putative exported protein; SubName: Full=Putative solute-binding periplasmic protein of ABC transpoter; chromosome CDS76410 489 - 0.466258
y0348 putative pilus chaperone, PapD familySubName: Full=Putative pilus chaperone, PapD family; chromosome CDS386990 819 - 0.482295
y0351 chaperoneSubName: Full=Chaperone; chromosome CDS391813 756 - 0.42328
y0352 fimbrial protein (precursor)SubName: Full=Fimbrial protein (Precursor); SubName: Full=Putative fimbrial protein; chromosome CDS392608 531 - 0.436911
y0432 hypotheticalSubName: Full=Putative exported protein; SubName: Full=Uncharacterized protein; chromosome CDS479296 2349 - 0.479353
y0514 putative secretinSubName: Full=Possible type III secretion protein; SubName: Full=Putative secretin; chromosome CDS585508 1572 + 0.43257
y0529 putative type III secretion system componentSubName: Full=Putative type III secretion system component; SubName: Full=Type III secretion system apparatus protein; chromosome CDS596406 963 + 0.54621
y0562 hypotheticalSubName: Full=Putative outer membrane fimbrial usher protein; SubName: Full=Uncharacterized protein; chromosome CDS628795 2379 + 0.461959
y0563 hypotheticalSubName: Full=Putative fimbrial chaperone; SubName: Full=Uncharacterized protein; chromosome CDS631245 744 + 0.435484
y1351 putative fimbrial biogenesis proteinSubName: Full=Putative fimbrial biogenesis protein; chromosome CDS1502195 750 + 0.492
y1539 putative fimbrial proteinSubName: Full=Putative fimbrial protein; chromosome CDS1705756 555 + 0.443243
y1544 putative fimbrial proteinSubName: Full=Putative fimbrial protein; chromosome CDS1711336 609 + 0.425287
y1858 hypotheticalSubName: Full=Probable outer membrane usher protein; SubName: Full=Uncharacterized protein; chromosome CDS2048629 2448 - 0.461193
y1859 putative pilus assembly chaperoneSubName: Full=Putative chaperone protein; SubName: Full=Putative pilus assembly chaperone; chromosome CDS2051247 753 - 0.446215
y1869 putative fimbrial proteinSubName: Full=Putative fimbrial protein; chromosome CDS2063668 543 + 0.425414
y1871 putative usher proteinSubName: Full=Putative outer membrane usher protein; SubName: Full=Putative usher protein; chromosome CDS2065224 2613 + 0.493685
y1872 putative fimbrial componenetSubName: Full=Putative fimbrial componenet; chromosome CDS2067827 1170 + 0.460684
y1873 putative pilin chaperoneSubName: Full=Putative chaperone protein; SubName: Full=Putative pilin chaperone; chromosome CDS2068993 804 + 0.482587
y2103 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS2317722 600 + 0.373333
y2205 hypotheticalSubName: Full=Putative phage protein; SubName: Full=Uncharacterized protein; chromosome CDS2436953 1206 - 0.494196
y2388 putative fimbrial precursorSubName: Full=Putative fimbrial; chromosome CDS2639085 570 + 0.473684
y2389 putative pilin chaperoneSubName: Full=Probable pili assembly chaperone; SubName: Full=Putative pilin chaperone; SubName: Full=Similar to yehC; chromosome CDS2639747 645 + 0.424806
y2390 putative outer membrane usher proteinSubName: Full=Probable fimbrial usher protein; SubName: Full=Putative outer membrane usher protein; SubName: Full=Similar to outer membrane usher protein FocD; chromosome CDS2640440 2592 + 0.494985
y2392 putative pilin chaperoneSubName: Full=Probable pili assembly chaperone; SubName: Full=Putative pilin chaperone; SubName: Full=Similar to AF022140_2 E. coli; chromosome CDS2644393 741 + 0.442645
y2465 putative flagellinSubName: Full=Putative flagellin; SubName: Full=Thermoregulated motility protein; chromosome CDS2729057 1110 - 0.468468
y2471 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS2734175 1914 + 0.429467
y2489 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS2751255 369 + 0.425474
y2958 putative methyl-accepting chemotaxis transmembrane proteinSubName: Full=Putative methyl-accepting chemotaxis transmembrane protein; chromosome CDS3256754 1815 + 0.501377
y3170 hypotheticalSubName: Full=Putative prepilin peptidase dependent protein; SubName: Full=Uncharacterized protein; chromosome CDS3488692 570 - 0.461404
y3190 putative methyl-accepting chemotaxis proteinSubName: Full=Putative methyl-accepting chemotaxis protein; chromosome CDS3511963 1701 - 0.449735
y3195 putative type IV prepilin peptidaseRecName: Full=Type 4 prepilin-like proteins leader peptide-processing enzyme; EC=2.1.1.-; EC=3.4.23.43; chromosome CDS3515572 915 - 0.357377
y3200 hypotheticalSubName: Full=General secretory pathway proteins G and H and related periplasmic/secreted proteins; SubName: Full=Uncharacterized protein; chromosome CDS3520008 591 - 0.338409
y3203 putative general secretion proteinSubName: Full=General secretion pathway protein E; SubName: Full=Putative general secretion protein; chromosome CDS3522200 1512 - 0.39418
y3204 putative general secretion proteinSubName: Full=Putative general secretion protein; chromosome CDS3523708 1923 - 0.333333
y3326 putative protein transportSubName: Full=Predicted ATPases involved in pili biogenesis, PilT homologs; SubName: Full=Uncharacterized protein; chromosome CDS3659626 1131 - 0.476569
y3441 lateral flagellinSubName: Full=Lateral flagellin; chromosome CDS3827295 1206 - 0.497512
y3445 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS3831788 927 - 0.402373
y3447 hypotheticalSubName: Full=Flagellar protein FlgJ; SubName: Full=Putative flagellar protein; SubName: Full=Uncharacterized protein; chromosome CDS3834214 294 - 0.503401
y3462 hypotheticalSubName: Full=Flagellar assembly protein FliH; SubName: Full=Uncharacterized protein; chromosome CDS3844754 744 - 0.537634
y3463 hypotheticalSubName: Full=Flagellar motor switch protein; SubName: Full=Uncharacterized protein; chromosome CDS3845475 1044 - 0.503831
y3465 hypotheticalRecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS3848140 381 - 0.514436
y3467 hypotheticalSubName: Full=Flagellar motor switch protein; SubName: Full=Uncharacterized protein; chromosome CDS3850088 900 + 0.375556
y3468 hypotheticalSubName: Full=Flagellar switch protein; SubName: Full=Uncharacterized protein; chromosome CDS3850980 414 + 0.444444
y3470 hypotheticalSubName: Full=Flagellar biosynthesis/type III secretory pathway protein; SubName: Full=Uncharacterized protein; chromosome CDS3852162 273 + 0.450549
y3479 putative chaperoneSubName: Full=Fimbrial chaperone protein; SubName: Full=Putative chaperone; chromosome CDS3861595 720 - 0.488889
y3489 hypotheticalSubName: Full=Putative exported protein; SubName: Full=Uncharacterized protein; chromosome CDS3872070 834 + 0.302158
y3659 hypotheticalSubName: Full=Uncharacterized protein; chromosome CDS4065790 1638 - 0.517094
y3925 hypotheticalSubName: Full=Predicted ATPases of the HSP70 class involved in cell division; SubName: Full=Uncharacterized protein; chromosome CDS4384144 942 + 0.514862
y4060 putative chaperoneSubName: Full=Putative chaperone; SubName: Full=Putative fimbrial chaperone; chromosome CDS4504671 828 - 0.426329
y4061 putative outer membrane usher proteinSubName: Full=Putative outer membrane usher protein; chromosome CDS4505531 636 - 0.490566
y4062 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS4506192 1830 - 0.448087
y4063 putative fimbrial-like proteinSubName: Full=Fimbrial protein; SubName: Full=Putative fimbrial-like protein; chromosome CDS4508097 645 - 0.427907
yapA putative autotransporterSubName: Full=Putative autotransporter; chromosome CDS1492316 4377 - 0.492803
yopD YopD homologSubName: Full=Putative Yop negative regulation/targeting component; SubName: Full=Putative Yop negative regulation/targeting component YopD; SubName: Full=Type III secretion host injection and negative regulator protein; SubName: Full=Yop targeting negative regulator; SubName: Full=YopD homolog; pCD1 CDS28012 921 + 0.431053
yscC Yop proteins translocation protein C homologSubName: Full=KIM5; SubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscC; SubName: Full=Type III secretion outermembrane pore forming protein; SubName: Full=Type III secretion protein; SubName: Full=Yop proteins translocation protein C homolog; pCD1 CDS8654 1824 - 0.454496
yscL Yop proteins translocation protein L homologRecName: Full=Yop proteins translocation protein L; AltName: Full=Low calcium response locus protein KC; pCD1 CDS3765 666 - 0.448949
yscN Yops secretion ATPase YscN homologSubName: Full=Putative Yops secretion ATP synthase; SubName: Full=Putative Yops secretion ATP synthase YscN; SubName: Full=Yops secretion ATPase YscN homolog; SubName: Full=Yops secretion protein; pCD1 CDS18721 1320 - 0.508333
yscQ Yop proteins translocation protein QRecName: Full=Yop proteins translocation protein Q; pCD1 CDS15973 924 - 0.481602