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2024-05-06 22:19:26

Gene list

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COG category: Cell motility
Organism: Yersinia pestis KIM, KIM

Number of genes found: 132

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA phage lambda host specific protein JpMT1 CDS6571 4479 - 0.52735
NA unknownpMT1 CDS19030 747 - 0.535475
HAP1 putative flagellar hook-associated proteinchromosome CDS3832740 1362 - 0.451542
caf1A F1 capsule anchoring proteinpMT1 CDS67669 2502 - 0.396083
caf1M Caf1MpMT1 CDS70195 777 - 0.405405
cheA sensory transducer kinasechromosome CDS2011055 2172 + 0.501842
cheB protein methylesterasechromosome CDS2030847 1053 + 0.530864
cheR protein glutamate methyltransferasechromosome CDS2029963 888 + 0.502252
cheW positive regulator of CheA protein activitychromosome CDS2013389 498 + 0.473896
cheZ chemotactic response; CheY protein phophatasechromosome CDS2032399 645 + 0.489922
ecpD probable pilin chaperonechromosome CDS1706449 780 + 0.411538
ecpD probable pilin chaperonechromosome CDS2064363 780 + 0.441026
fimD outer membrane usher protein FIMD precursorchromosome CDS389158 2628 - 0.471081
flgA putative flagella basal body P-ring formation proteinchromosome CDS2772500 765 + 0.517647
flgB cell-proximal portion of basal-body rod proteinchromosome CDS2771914 414 - 0.502415
flgC cell-proximal portion of basal-body rod proteinchromosome CDS2771504 405 - 0.540741
flgC flagellar biosynthesis protein, cell-proximal portion of basal-body rodchromosome CDS3839945 426 - 0.528169
flgD basal-body rod modification proteinchromosome CDS2770812 678 - 0.529499
flgE hook proteinchromosome CDS2769324 1287 - 0.508159
flgE putative flagellar hook proteinchromosome CDS3837990 1242 - 0.509662
flgF putative flagellar rod proteinchromosome CDS3837259 732 - 0.554645
flgF cell-proximal portion of basal-body rod proteinchromosome CDS2768673 630 - 0.579365
flgG cell-distal portion of basal-body rodchromosome CDS2767994 699 - 0.516452
flgG flagellar biosynthesis protein, cell-distal portion of basal-body rodchromosome CDS3836406 786 - 0.522901
flgH putative flagellar l-ring proteinchromosome CDS3835706 666 - 0.53003
flgH basal-body outer-membrane L (lipopolysaccharide layer) ring proteinchromosome CDS2767161 732 - 0.52459
flgI homolog of Salmonella P-ring of flagella basal bodychromosome CDS2766037 1110 - 0.545946
flgI putative flagella basal body proteinchromosome CDS3834517 1176 - 0.542517
flgJ flagellar biosynthesis proteinchromosome CDS2765093 945 - 0.540741
flgK flagellar biosynthesis protein, hook-filament junction protein 1chromosome CDS2762701 1665 - 0.500901
flgL flagellar biosynthesis protein, hook-filament junction proteinchromosome CDS2761582 1014 - 0.476331
flgM anti-FliA factorchromosome CDS2773415 303 + 0.475248
flgN flagellar biosynthesis proteinchromosome CDS2773733 444 + 0.488739
flhA flagellar biosynthesis proteinchromosome CDS2779066 2079 - 0.518037
flhB flagellar biosynthesis proteinchromosome CDS2781144 1161 - 0.525409
flhB putative flagellar biosynthetic proteinchromosome CDS3853214 1134 + 0.446208
fliD filament capping proteinchromosome CDS2730463 1401 + 0.465382
fliE basal-body componentchromosome CDS2739174 318 - 0.493711
fliF putative flagellar M ring proteinchromosome CDS3846490 1641 - 0.502133
fliF basal-body MS (membrane and supramembrane)-ring and collar proteinchromosome CDS2739838 1713 + 0.532983
fliG flagellar motor switch proteinchromosome CDS2741547 993 + 0.521652
fliH flagellar assembly proteinchromosome CDS2742511 738 + 0.550135
fliI flagellum-specific ATP synthasechromosome CDS2743187 1479 + 0.54902
fliI flagellum-specific ATP synthasechromosome CDS594314 1338 + 0.575486
fliI flagellum-specific ATP synthasechromosome CDS3843421 1341 - 0.580164
fliJ flagellar fliJ proteinchromosome CDS2744765 447 + 0.478747
fliK flagellar hook-length control proteinchromosome CDS2745208 1353 + 0.552846
fliL flagellar biosynthesischromosome CDS2746728 570 + 0.484211
fliM flagellar motor switch proteinchromosome CDS2747303 1002 + 0.50499
fliN flagellar motor switch proteinchromosome CDS2748301 417 + 0.494005
fliO flagellar biosynthesis proteinchromosome CDS2748717 537 + 0.577281
fliP flagellar biosynthesis proteinchromosome CDS3851390 771 + 0.514916
fliP flagellar biosynthesis proteinchromosome CDS2749250 825 + 0.513939
fliQ flagellar biosynthesis proteinchromosome CDS2750180 270 + 0.522222
fliR flagellar biosynthesis proteinchromosome CDS2750452 783 + 0.496807
fliR putative flagellar biosynthetic proteinchromosome CDS3852435 780 + 0.475641
fliS repressor of class 3a and 3b operons (RflA activity)chromosome CDS2731874 399 + 0.466165
hofB putative integral membrane proteinchromosome CDS847025 1557 - 0.460501
hofC putative integral membrane proteinchromosome CDS845829 1200 - 0.455
hofF putative general protein secretion proteinchromosome CDS3521012 1047 - 0.344795
hofG putative general protein secretion proteinchromosome CDS3520555 438 - 0.394977
lfgA putative flagellar proteinchromosome CDS3840808 918 + 0.486928
lfgB putative flagellar rod proteinchromosome CDS3840373 447 - 0.463087
lfgD putative flagellar assembly proteinchromosome CDS3839286 657 - 0.512938
motA proton conductor component of motorchromosome CDS2008877 888 + 0.48536
motB lateral flagellar motor proteinchromosome CDS2009761 1284 + 0.490654
papC putative outer membrane usher proteinchromosome CDS3862332 2481 - 0.503023
ppdD prelipin peptidase dependent proteinchromosome CDS848556 465 - 0.447312
psaB pH 6 Antigen chaperone proteinchromosome CDS3183531 822 - 0.377129
psaC outer membrane usher proteinchromosome CDS3180976 2514 - 0.492045
smfA fimbrial A protein precursorchromosome CDS1761515 531 + 0.463277
tap methyl-accepting chemotaxis protein IV, peptide sensor receptorchromosome CDS2028195 1611 + 0.509001
tsr methyl-accepting chemotaxis protein IIchromosome CDS4527920 1950 + 0.492308
tsr methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS2026338 1674 + 0.480287
y0066 putative solute-binding periplasmic protein of ABC transpoterchromosome CDS76410 489 - 0.466258
y0348 putative pilus chaperone, PapD familychromosome CDS386990 819 - 0.482295
y0351 chaperonechromosome CDS391813 756 - 0.42328
y0352 fimbrial protein (precursor)chromosome CDS392608 531 - 0.436911
y0432 hypotheticalchromosome CDS479296 2349 - 0.479353
y0514 putative secretinchromosome CDS585508 1572 + 0.43257
y0529 putative type III secretion system componentchromosome CDS596406 963 + 0.54621
y0562 hypotheticalchromosome CDS628795 2379 + 0.461959
y0563 hypotheticalchromosome CDS631245 744 + 0.435484
y1351 putative fimbrial biogenesis proteinchromosome CDS1502195 750 + 0.492
y1539 putative fimbrial proteinchromosome CDS1705756 555 + 0.443243
y1544 putative fimbrial proteinchromosome CDS1711336 609 + 0.425287
y1858 hypotheticalchromosome CDS2048629 2448 - 0.461193
y1859 putative pilus assembly chaperonechromosome CDS2051247 753 - 0.446215
y1869 putative fimbrial proteinchromosome CDS2063668 543 + 0.425414
y1871 putative usher proteinchromosome CDS2065224 2613 + 0.493685
y1872 putative fimbrial componenetchromosome CDS2067827 1170 + 0.460684
y1873 putative pilin chaperonechromosome CDS2068993 804 + 0.482587
y2103 hypotheticalchromosome CDS2317722 600 + 0.373333
y2205 hypotheticalchromosome CDS2436953 1206 - 0.494196
y2388 putative fimbrial precursorchromosome CDS2639085 570 + 0.473684
y2389 putative pilin chaperonechromosome CDS2639747 645 + 0.424806
y2390 putative outer membrane usher proteinchromosome CDS2640440 2592 + 0.494985
y2392 putative pilin chaperonechromosome CDS2644393 741 + 0.442645
y2465 putative flagellinchromosome CDS2729057 1110 - 0.468468
y2471 hypotheticalchromosome CDS2734175 1914 + 0.429467
y2489 hypotheticalchromosome CDS2751255 369 + 0.425474
y2958 putative methyl-accepting chemotaxis transmembrane proteinchromosome CDS3256754 1815 + 0.501377
y3170 hypotheticalchromosome CDS3488692 570 - 0.461404
y3190 putative methyl-accepting chemotaxis proteinchromosome CDS3511963 1701 - 0.449735
y3195 putative type IV prepilin peptidasechromosome CDS3515572 915 - 0.357377
y3200 hypotheticalchromosome CDS3520008 591 - 0.338409
y3203 putative general secretion proteinchromosome CDS3522200 1512 - 0.39418
y3204 putative general secretion proteinchromosome CDS3523708 1923 - 0.333333
y3326 putative protein transportchromosome CDS3659626 1131 - 0.476569
y3441 lateral flagellinchromosome CDS3827295 1206 - 0.497512
y3445 hypotheticalchromosome CDS3831788 927 - 0.402373
y3447 hypotheticalchromosome CDS3834214 294 - 0.503401
y3462 hypotheticalchromosome CDS3844754 744 - 0.537634
y3463 hypotheticalchromosome CDS3845475 1044 - 0.503831
y3465 hypotheticalchromosome CDS3848140 381 - 0.514436
y3467 hypotheticalchromosome CDS3850088 900 + 0.375556
y3468 hypotheticalchromosome CDS3850980 414 + 0.444444
y3470 hypotheticalchromosome CDS3852162 273 + 0.450549
y3479 putative chaperonechromosome CDS3861595 720 - 0.488889
y3489 hypotheticalchromosome CDS3872070 834 + 0.302158
y3659 hypotheticalchromosome CDS4065790 1638 - 0.517094
y3925 hypotheticalchromosome CDS4384144 942 + 0.514862
y4060 putative chaperonechromosome CDS4504671 828 - 0.426329
y4061 putative outer membrane usher proteinchromosome CDS4505531 636 - 0.490566
y4062 putative membrane proteinchromosome CDS4506192 1830 - 0.448087
y4063 putative fimbrial-like proteinchromosome CDS4508097 645 - 0.427907
yapA putative autotransporterchromosome CDS1492316 4377 - 0.492803
yopD YopD homologpCD1 CDS28012 921 + 0.431053
yscC Yop proteins translocation protein C homologpCD1 CDS8654 1824 - 0.454496
yscL Yop proteins translocation protein L homologpCD1 CDS3765 666 - 0.448949
yscN Yops secretion ATPase YscN homologpCD1 CDS18721 1320 - 0.508333
yscQ Yop proteins translocation protein QpCD1 CDS15973 924 - 0.481602