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2024-05-22 08:23:11

Gene list

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COG category: Cell motility
Organism: Agrobacterium tumefaciens str. C58, C58

Number of genes found: 132

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Agrobacterium tumefaciens str. C58, C58
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
AGR_C_1002 AGR_C_1002pSubName: Full=Flagellar motor protein, PAL/OmpA family; chromosome CDS553239 1302 + 0.615975
AGR_C_1012 AGR_C_1012pSubName: Full=Flagellar hook protein; chromosome CDS558737 1278 + 0.571205
AGR_C_1014 AGR_C_1014pSubName: Full=Flagellar hook associated protein; chromosome CDS560037 1479 + 0.570656
AGR_C_1016 AGR_C_1016pSubName: Full=Flagellar hook-associated protein; chromosome CDS561519 1104 + 0.561594
AGR_C_1021 AGR_C_1021pSubName: Full=Hook formation protein; chromosome CDS563438 474 + 0.603376
AGR_C_1023 AGR_C_1023pSubName: Full=Flagellar biosynthetic protein; chromosome CDS563957 267 + 0.58427
AGR_C_1027 AGR_C_1027p chromosome CDS564297 2172 + 0.590239
AGR_C_1028 AGR_C_1028p chromosome CDS566465 756 + 0.575397
AGR_C_1032 AGR_C_1032p chromosome CDS567768 558 + 0.555556
AGR_C_1147 AGR_C_1147p chromosome CDS634471 1902 - 0.621451
AGR_C_1336 AGR_C_1336p chromosome CDS736274 2148 + 0.641993
AGR_C_1595 AGR_C_1595pSubName: Full=Methyl-accepting chemotaxis protein; chromosome CDS867965 2358 + 0.637405
AGR_C_1888 AGR_C_1888pSubName: Full=Methyl-accepting chemotaxis protein; chromosome CDS1019261 1500 - 0.592667
AGR_C_2142 AGR_C_2142pSubName: Full=Uncharacterized protein; chromosome CDS1150217 1191 - 0.59026
AGR_C_2490 AGR_C_2490p chromosome CDS1337782 6468 - 0.635436
AGR_C_3234 AGR_C_3234p chromosome CDS1745527 426 + 0.591549
AGR_C_3503 AGR_C_3503p chromosome CDS1888105 1866 - 0.617363
AGR_C_371 AGR_C_371pSubName: Full=Components of type IV pilus; chromosome CDS220701 987 - 0.567376
AGR_C_3760 AGR_C_3760p chromosome CDS2034936 555 + 0.596396
AGR_C_3943 AGR_C_3943p chromosome CDS2144925 2154 + 0.601671
AGR_C_4040 AGR_C_4040p chromosome CDS2190937 2307 + 0.611617
AGR_C_4283 AGR_C_4283p chromosome CDS2333588 2013 - 0.605067
AGR_C_4744 AGR_C_4744p chromosome CDS2600153 594 + 0.558923
AGR_C_652 AGR_C_652p chromosome CDS366748 2352 + 0.608418
AGR_C_678 AGR_C_678p chromosome CDS378540 2079 + 0.616643
AGR_C_907 AGR_C_907p chromosome CDS503784 1752 + 0.627283
AGR_C_912 AGR_C_912p chromosome CDS506213 2274 + 0.613456
AGR_C_914 AGR_C_914pRecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; chromosome CDS508500 909 + 0.584158
AGR_C_916 AGR_C_916pRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon; EC=3.1.1.61; chromosome CDS509405 1056 + 0.642992
AGR_C_918 AGR_C_918pRecName: Full=Probable chemoreceptor glutamine deamidase CheD; EC=3.5.1.44; chromosome CDS510846 546 + 0.60989
AGR_C_922 AGR_C_922pRecName: Full=Flagellar M-ring protein; chromosome CDS511898 1701 + 0.60435
AGR_C_929 AGR_C_929p chromosome CDS515583 1869 + 0.602996
AGR_C_958 AGR_C_958pSubName: Full=Flagellin; chromosome CDS531735 942 - 0.56051
AGR_C_959 AGR_C_959p chromosome CDS532918 1014 - 0.602564
AGR_C_961 AGR_C_961pSubName: Full=Flagella associated protein; chromosome CDS534287 921 - 0.591748
AGR_C_963 AGR_C_963pRecName: Full=Flagellar biosynthetic protein FliP; chromosome CDS535579 738 - 0.571816
AGR_C_967 AGR_C_967pRecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor; chromosome CDS536840 720 - 0.609722
AGR_C_970 AGR_C_970pRecName: Full=Flagellar P-ring protein; AltName: Full=Basal body P-ring protein; Flags: Precursor; chromosome CDS538089 1122 - 0.639929
AGR_C_971 AGR_C_971p chromosome CDS539207 441 - 0.598639
AGR_C_972 AGR_C_972pRecName: Full=Flagellar basal-body rod protein FlgG; AltName: Full=Distal rod protein; chromosome CDS539716 789 - 0.604563
AGR_C_974 AGR_C_974pRecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS540523 339 - 0.584071
AGR_C_975 AGR_C_975pRecName: Full=Flagellar basal-body rod protein FlgC; chromosome CDS540858 420 - 0.609524
AGR_C_976 AGR_C_976p chromosome CDS541281 405 - 0.572839
AGR_C_980 AGR_C_980pRecName: Full=Flagellum-specific ATP synthase; EC=3.6.3.14; chromosome CDS542412 1422 - 0.630098
AGR_C_982 AGR_C_982pSubName: Full=Flagellar basal body rod protein; chromosome CDS543845 735 - 0.606803
AGR_C_985 AGR_C_985pRecName: Full=Motility protein A; AltName: Full=Chemotaxis protein MotA; chromosome CDS545547 873 + 0.573883
AGR_C_987 AGR_C_987p chromosome CDS546416 966 + 0.581781
AGR_C_988 AGR_C_988p chromosome CDS547397 588 + 0.568027
AGR_C_989 AGR_C_989pRecName: Full=Flagellar motor switch protein FliG; chromosome CDS548012 1044 + 0.598659
AGR_C_991 AGR_C_991pSubName: Full=Flagellar biosynthetic protein; chromosome CDS549181 1083 + 0.55771
AGR_C_996 AGR_C_996p chromosome CDS550996 1311 + 0.584287
AGR_L_1060 AGR_L_1060p chromosome CDS609012 1521 + 0.623274
AGR_L_1989 AGR_L_1989pSubName: Full=Uncharacterized protein; chromosome CDS1134868 681 + 0.612335
AGR_L_2005 AGR_L_2005pSubName: Full=Uncharacterized protein; chromosome CDS1144880 1542 - 0.477302
AGR_L_2177 AGR_L_2177p chromosome CDS1243920 1032 + 0.618217
AGR_L_2218 AGR_L_2218p chromosome CDS1267593 2367 - 0.61259
AGR_L_297 AGR_L_297pSubName: Full=Fimbrial chaperone; chromosome CDS175743 717 + 0.617852
AGR_L_2981 AGR_L_2981p chromosome CDS1708377 1752 - 0.586187
AGR_L_299 AGR_L_299pSubName: Full=Fimbrial usher protein; chromosome CDS176431 2439 + 0.605986
AGR_L_949GM AGR_L_949GMp chromosome CDS169719 1878 - 0.616613
AGR_pAT_216 AGR_pAT_216p AT CDS159052 510 - 0.539216
AGR_pAT_224 AGR_pAT_224pSubName: Full=Type IV secretion protein AvhB5; AT CDS164515 699 + 0.583691
AGR_pAT_647 AGR_pAT_647pSubName: Full=Methyl-accepting chemotaxis protein; AT CDS434891 1941 + 0.574446
AGR_pAT_bx65 AGR_pAT_bx65pSubName: Full=Type IV secretion protein AvhB11; AT CDS169407 1011 + 0.53907
Atu0373 methyl-accepting chemotaxis protein chromosome CDS366918 2382 + 0.607473
Atu0514 methyl-accepting chemotaxis protein chromosome CDS504028 1707 + 0.629174
Atu0583 hypothetical protein chromosome CDS567435 420 + 0.547619
Atu0584 conserved hypothetical protein chromosome CDS567997 528 + 0.558712
Atu0604 hypothetical protein chromosome CDS591616 348 - 0.58908
Atu1157 conserved hypothetical protein chromosome CDS1150327 1191 - 0.59026
Atu1348 conserved hypothetical protein chromosome CDS1337895 6468 - 0.635436
Atu3725 methyl-accepting chemotaxis protein chromosome CDS804818 2346 + 0.612958
Atu3832 hypothetical protein chromosome CDS928335 1542 + 0.477302
Atu3845 hypothetical protein chromosome CDS939208 681 - 0.612335
Atu4731 fimbrial usher protein chromosome CDS1895888 2439 - 0.605986
Atu4732 fimbrial chaperone chromosome CDS1898298 717 - 0.617852
Atu4736 methyl-accepting chemotaxis protein chromosome CDS1903083 1956 + 0.608384
Atu5030 hypothetical protein AT CDS30855 543 + 0.491713
Atu5442 methyl-accepting chemotaxis protein AT CDS434495 1941 + 0.574446
CheR chemotaxis methyltransferase chromosome CDS508699 909 + 0.584158
atsE conserved hypothetical protein AT CDS158655 405 - 0.533333
avhB11 agrobacterium virulence homologue virB11 AT CDS169010 1011 + 0.53907
avhB5 agrobacterium virulence homologue VirB5 AT CDS164118 699 + 0.583691
cheA cheA homolog chromosome CDS506412 2274 + 0.613456
cheB protein-glutamate methylesterase chromosome CDS509604 1056 + 0.642992
cheD chemotaxis protein chromosome CDS511045 546 + 0.60989
cheW chemotaxis protein chromosome CDS2035136 468 + 0.600427
cheW chemotaxis protein chromosome CDS2600368 492 + 0.556911
ctpI components of type IV pilus chromosome CDS220901 987 - 0.567376
filN flagellar motor switch protein FliN chromosome CDS547644 540 + 0.574074
fla flagellin chromosome CDS531934 942 - 0.56051
flaA flagella associated protein chromosome CDS534486 921 - 0.591748
flaB flaB chromosome CDS533117 963 - 0.609553
flaD flagellin protein FlaD chromosome CDS551213 1293 + 0.583913
flgA flagellar protein FLGA precursor chromosome CDS539406 489 - 0.595092
flgB flagellar basal-body rod protein FlgB chromosome CDS541480 393 - 0.577608
flgC flagellar basal-body rod protein chromosome CDS541057 420 - 0.609524
flgD hook formation protein chromosome CDS563637 474 + 0.603376
flgE flagellar hook protein chromosome CDS558936 1278 + 0.571205
flgF flagellar basal body rod protein chromosome CDS544044 735 - 0.606803
flgG flagellar basal-body rod protein chromosome CDS539915 789 - 0.604563
flgH flagellar L-ring protein precursor chromosome CDS537039 720 - 0.609722
flgI flagellar P-ring protein precursor chromosome CDS538288 1122 - 0.639929
flgK hook associated protein I homolog chromosome CDS560236 1479 + 0.570656
flgL flagellar hook-associated protein chromosome CDS561718 1104 + 0.561594
flhA flagellar biosynthesis protein chromosome CDS564580 2088 + 0.591954
flhB flagellar biosynthetic protein chromosome CDS549380 1083 + 0.55771
fliE flagellar hook-basal body complex protein chromosome CDS540722 339 - 0.584071
fliF flagellar M-ring protein chromosome CDS512115 1683 + 0.604872
fliG flagellar motor switch protein FliG chromosome CDS548211 1044 + 0.598659
fliI flagellum-specific ATP synthase chromosome CDS542611 1422 - 0.630098
fliM flagellar motor switch protein chromosome CDS546621 960 + 0.583333
fliP flagellar biosynthetic protein chromosome CDS535778 738 - 0.571816
fliQ flagellar biosynthetic protein chromosome CDS564156 267 + 0.58427
fliR flagellar biosynthetic protein FLIR chromosome CDS566664 756 + 0.575397
mclA methyl-accepting chemotaxis protein chromosome CDS364562 1818 + 0.578658
mclA methyl-accepting chemotaxis protein chromosome CDS1888219 1815 - 0.619284
mclA methyl-accepting chemotaxis protein chromosome CDS515803 1848 + 0.604437
mcpA methyl-accepting chemotaxis protein chromosome CDS2333702 1950 - 0.606154
mcpA methyl-accepting chemotaxis protein A chromosome CDS634670 1824 - 0.620614
mcpA methyl-accepting chemotaxis protein chromosome CDS2145062 2130 + 0.604225
mcpA methyl-accepting chemotaxis protein chromosome CDS2191092 2265 + 0.612804
mcpA methyl-accepting chemotaxis protein chromosome CDS378809 2010 + 0.620896
mcpC methyl-accepting chemotaxis protein chromosome CDS868613 1911 + 0.648875
mcpG chemotaxis methyl-accepting protein chromosome CDS736599 2022 + 0.642433
mcpV methyl-accepting chemotaxis protein chromosome CDS1019371 1500 - 0.592667
motA chemotaxis transmembrane protein chromosome CDS545746 873 + 0.573883
motB flagellar motor protein, PAL/OmpA family chromosome CDS553438 1302 + 0.615975
motB flagellar motor protein chromosome CDS829805 822 - 0.625304
ompA porin chromosome CDS1464224 1506 - 0.622842
trbD conjugal transfer protein Ti CDS49583 300 - 0.65
virB11 component of type IV secretion system Ti CDS192293 1035 + 0.551691