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2024-05-17 03:18:37

Gene list

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COG category: Cell motility
Organism: Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720

Number of genes found: 125

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Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
STM0082 putative secreted proteinSubName: Full=Putative secreted protein; chromosome CDS94771 291 - 0.463918
STM0282 putative outer membrane protein, OmpA familySubName: Full=Putative outer membrane protein, OmpA family; chromosome CDS321111 1305 + 0.59387
STM0307 homology to Shigella VirG proteinSubName: Full=Homology to Shigella VirG protein; chromosome CDS350943 408 - 0.470588
STM0350 homology to outer membrane efflux proteinSubName: Full=Homology to outer membrane efflux protein; chromosome CDS392419 1512 - 0.587302
STM0916 putative Fels-1 prophage major tail proteinSubName: Full=Putative Fels-1 prophage major tail protein; chromosome CDS987126 744 + 0.568548
STM1019 Gifsy-2 prophage proteinSubName: Full=Gifsy-1 prophage protein; SubName: Full=Gifsy-2 prophage protein; chromosome CDS1109305 234 + 0.461538
STM1038 Gifsy-2 prophage probable major tail proteinSubName: Full=Gifsy-2 prophage probable major tail protein; chromosome CDS1124410 750 + 0.508
STM1657 putative methyl-accepting chemotaxis proteinSubName: Full=Putative methyl-accepting chemotaxis protein; chromosome CDS1751277 1155 - 0.489177
STM2314 putative chemotaxis signal transduction proteinSubName: Full=Putative chemotaxis signal transduction protein; EC=2.7.3.-; chromosome CDS2420643 1002 + 0.520958
STM2597 Gifsy-1 prophage proteinSubName: Full=Gifsy-1 prophage protein; chromosome CDS2747033 747 - 0.56091
STM2621 Gifsy-1 prophage proteinSubName: Full=Gifsy-1 prophage protein; SubName: Full=Gifsy-2 prophage protein; chromosome CDS2765549 234 - 0.461538
STM2714 Fels-2 prophage proteinSubName: Full=Fels-2 prophage protein; chromosome CDS2859028 429 - 0.608392
STM2721 Fels-2 prophage proteinSubName: Full=Fels-2 prophage protein; chromosome CDS2863059 834 - 0.582734
STM2742 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; chromosome CDS2880444 1194 + 0.416248
STM3138 putative methyl-accepting chemotaxis proteinSubName: Full=Putative methyl-accepting chemotaxis protein; chromosome CDS3300619 1059 - 0.430595
STM3152 putative methyl-accepting chemotaxis proteinSubName: Full=Putative methyl-accepting chemotaxis protein; chromosome CDS3314324 1644 - 0.571776
STM3216 putative methyl-accepting chemotaxis proteinSubName: Full=Putative methyl-accepting chemotaxis protein; chromosome CDS3380802 1566 - 0.505109
STM4595 putative fimbrial chaparone proteinSubName: Full=Putative fimbrial chaparone protein; chromosome CDS4852849 546 - 0.501832
bcfA fimbrial subunitSubName: Full=Fimbrial subunit; chromosome CDS24469 543 + 0.517495
bcfB fimbrial chaparoneSubName: Full=Fimbrial chaparone; chromosome CDS25112 687 + 0.509461
bcfC fimbrial usherSubName: Full=Fimbrial usher; chromosome CDS25803 2622 + 0.544622
bcfD fimbrial subunitSubName: Full=Fimbrial subunit; chromosome CDS28425 1008 + 0.500992
bcfE fimbrial subunitSubName: Full=Fimbrial subunit; chromosome CDS29433 546 + 0.494505
bcfF fimbrial subunitSubName: Full=Fimbrial subunit; chromosome CDS29994 519 + 0.55684
bcfG fimbrial chaparoneSubName: Full=Fimbrial chaparone; chromosome CDS30478 732 + 0.539617
cheA sensory histitine protein kinaseRecName: Full=Chemotaxis protein CheA; EC=2.7.13.3; chromosome CDS2017178 2016 - 0.553075
cheB methyl esteraseRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase; EC=3.1.1.61; chromosome CDS2012690 1050 - 0.558095
cheM methyl accepting chemotaxis protein IIRecName: Full=Methyl-accepting chemotaxis protein II; Short=MCP-II; AltName: Full=Aspartate chemoreceptor protein; chromosome CDS2014756 1662 - 0.555355
cheR glutamate methyltransferaseRecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; chromosome CDS2013736 867 - 0.527105
cheW purine-binding chemotaxis proteinRecName: Full=Chemotaxis protein CheW; chromosome CDS2016654 504 - 0.531746
cheZ chemotactic response proteinRecName: Full=Protein phosphatase CheZ; EC=3.1.3.-; AltName: Full=Chemotaxis protein CheZ; chromosome CDS2011628 645 - 0.573643
cpxP periplasmic repressor of cpx regulon by interaction with CpxASubName: Full=Periplasmic repressor of cpx regulon by interaction with CpxA; chromosome CDS4270595 501 + 0.506986
csgA curlin major subunitRecName: Full=Major curlin subunit; AltName: Full=Fimbrin SEF17; Flags: Precursor; chromosome CDS1231630 456 + 0.515351
fimA major type 1 subunit fimbrin (pilin)RecName: Full=Type-1 fimbrial protein, A chain; AltName: Full=Type-1A pilin; Flags: Precursor; chromosome CDS604115 558 + 0.541219
fimC periplasmic chaperone, required for type 1 fimbriaeRecName: Full=Chaperone protein FimC; Flags: Precursor; chromosome CDS605325 693 + 0.503608
fimD outer membrane usher proteinRecName: Full=Outer membrane usher protein FimD; Flags: Precursor; chromosome CDS606048 2613 + 0.556831
fimF putative fimbrial proteinRecName: Full=Fimbrial-like protein FimF; Flags: Precursor; chromosome CDS609692 519 + 0.55106
fimH minor fimbrial subunitRecName: Full=Protein FimH; Flags: Precursor; chromosome CDS608675 1008 + 0.516865
fimI fimbrial protein internal segmentRecName: Full=Fimbrin-like protein FimI; Flags: Precursor; chromosome CDS604748 534 + 0.541198
flgA flagellar biosynthesis proteinRecName: Full=Flagella basal body P-ring formation protein FlgA; Flags: Precursor; chromosome CDS1257431 660 - 0.580303
flgB flagellar biosynthesis proteinRecName: Full=Flagellar basal body rod protein FlgB; AltName: Full=Putative proximal rod protein; chromosome CDS1258247 417 + 0.522782
flgC flagellar biosynthesis proteinRecName: Full=Flagellar basal-body rod protein FlgC; AltName: Full=Putative proximal rod protein; chromosome CDS1258667 405 + 0.548148
flgD flagellar biosynthesis proteinRecName: Full=Basal-body rod modification protein FlgD; chromosome CDS1259083 699 + 0.545064
flgE hook proteinRecName: Full=Flagellar hook protein FlgE; chromosome CDS1259808 1212 + 0.55363
flgF flagellar biosynthesis proteinRecName: Full=Flagellar basal-body rod protein FlgF; AltName: Full=Putative proximal rod protein; chromosome CDS1261040 756 + 0.607143
flgG flagellar biosynthesis proteinRecName: Full=Flagellar basal-body rod protein FlgG; AltName: Full=Distal rod protein; chromosome CDS1261809 783 + 0.564496
flgH flagellar biosynthesis proteinRecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor; chromosome CDS1262646 699 + 0.543634
flgI putative flagella basal body proteinRecName: Full=Flagellar P-ring protein; AltName: Full=Basal body P-ring protein; Flags: Precursor; chromosome CDS1263356 1098 + 0.576503
flgJ flagellar biosynthesis proteinRecName: Full=Peptidoglycan hydrolase FlgJ; EC=3.2.1.-; AltName: Full=Muramidase FlgJ; chromosome CDS1264453 951 + 0.562566
flgK hook-filament junction protein 1RecName: Full=Flagellar hook-associated protein 1; Short=HAP1; chromosome CDS1265468 1662 + 0.518051
flgL hook-filament junction proteinRecName: Full=Flagellar hook-associated protein 3; Short=HAP3; AltName: Full=Hook-filament junction protein; chromosome CDS1267144 954 + 0.536688
flgM anti-FliA factorRecName: Full=Negative regulator of flagellin synthesis; AltName: Full=Anti-sigma-28 factor; chromosome CDS1257046 294 - 0.517007
flgN flagellar biosynthesis proteinRecName: Full=Flagella synthesis protein FlgN; chromosome CDS1256619 423 - 0.536643
flhA flagellar biosynthesis proteinRecName: Full=Flagellar biosynthesis protein FlhA; chromosome CDS2008212 2079 - 0.559885
flhB putative part of export apparatus for flagellar proteinsRecName: Full=Flagellar biosynthetic protein FlhB; chromosome CDS2010283 1152 - 0.559028
fliC flagellar biosynthesis; flagellinRecName: Full=Flagellin; AltName: Full=Phase 1-I flagellin; chromosome CDS2047658 1488 - 0.491935
fliD filament capping proteinRecName: Full=Flagellar hook-associated protein 2; Short=HAP2; AltName: Full=Filament cap protein; AltName: Full=Flagellar cap protein; chromosome CDS2049402 1404 + 0.49359
fliE putative flagellar hook-basal body proteinRecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS2056008 315 - 0.568254
fliF basal-body MS (membrane and supramembrane)-ring and collar proteinRecName: Full=Flagellar M-ring protein; chromosome CDS2056539 1683 + 0.571598
fliG flagellar biosynthesis proteinRecName: Full=Flagellar motor switch protein FliG; chromosome CDS2058214 996 + 0.553213
fliH flagellar biosynthesis proteinRecName: Full=Flagellar assembly protein FliH; chromosome CDS2059202 708 + 0.60452
fliI flagellum-specific ATP synthaseRecName: Full=Flagellum-specific ATP synthase; EC=3.6.3.14; chromosome CDS2059909 1371 + 0.60248
fliJ flagellar FliJ proteinRecName: Full=Flagellar FliJ protein; chromosome CDS2061301 444 + 0.513514
fliK flagellar hook-length control proteinRecName: Full=Flagellar hook-length control protein; chromosome CDS2061741 1218 + 0.614943
fliL flagellar biosynthesisRecName: Full=Flagellar protein FliL; chromosome CDS2063063 468 + 0.547009
fliM flagellar biosynthesis proteinRecName: Full=Flagellar motor switch protein FliM; chromosome CDS2063535 1005 + 0.534328
fliN flagellar biosynthesis proteinRecName: Full=Flagellar motor switch protein FliN; chromosome CDS2064536 414 + 0.548309
fliO flagellar biosynthesis proteinRecName: Full=Flagellar protein FliO; chromosome CDS2064949 378 + 0.60582
fliP flagellar biosynthesis proteinRecName: Full=Flagellar biosynthetic protein FliP; Flags: Precursor; chromosome CDS2065326 738 + 0.536585
fliQ flagellar biosynthesis proteinRecName: Full=Flagellar biosynthetic protein FliQ; chromosome CDS2066073 270 + 0.518519
fliR putative flagellar biosynthetic proteinRecName: Full=Flagellar biosynthetic protein FliR; chromosome CDS2066351 795 + 0.515723
fliS repressor of class 3a and 3b operons (RflA activity)RecName: Full=Flagellar protein FliS; chromosome CDS2050820 408 + 0.5
fljB filament structural proteinRecName: Full=Phase 2 flagellin; chromosome CDS2913230 1521 - 0.506903
hofB putative integral membrane proteinSubName: Full=Putative integral membrane protein; chromosome CDS166319 1386 - 0.554834
hofC putative component in type IV pilin biogenesisSubName: Full=Putative component in type IV pilin biogenesis; chromosome CDS165127 1203 - 0.544472
hopD leader peptidase HopDRecName: Full=Leader peptidase HopD; chromosome CDS3596910 468 + 0.529915
invC surface presentation of antigensRecName: Full=Probable ATP synthase SpaL; EC=3.6.3.14; AltName: Full=Invasion protein InvC; chromosome CDS3036677 1296 - 0.542438
invG outer membrane invasion proteinRecName: Full=Protein InvG; Flags: Precursor; chromosome CDS3041597 1689 - 0.46418
lpfA long polar fimbriaRecName: Full=Long polar fimbria protein A; Flags: Precursor; chromosome CDS3827449 537 - 0.463687
lpfB long polar fimbrial chaperoneRecName: Full=Chaperone protein LpfB; Flags: Precursor; chromosome CDS3826666 699 - 0.447783
lpfC long polar fimbrial outer membrane usher proteinRecName: Full=Outer membrane usher protein LpfC; Flags: Precursor; chromosome CDS3824115 2529 - 0.553578
lpfE long polar fimbrial minor proteinRecName: Full=Protein LpfE; Flags: Precursor; chromosome CDS3822485 528 - 0.511364
motA proton conductor component of motorRecName: Full=Motility protein A; AltName: Full=Chemotaxis protein MotA; chromosome CDS2020124 888 - 0.512387
motB enables flagellar motor rotationRecName: Full=Motility protein B; AltName: Full=Chemotaxis protein MotB; chromosome CDS2019198 930 - 0.545161
orgA putative flagellar biosynthesis/type III secretory pathway proteinRecName: Full=Oxygen-regulated invasion protein OrgB; chromosome CDS3013788 681 - 0.450808
ppdA prepilin peptidase dependent protein ASubName: Full=Prepilin peptidase dependent protein A; chromosome CDS3157362 471 - 0.56051
ppdD prelipin peptidase dependent proteinSubName: Full=Prelipin peptidase dependent protein; chromosome CDS167714 438 - 0.53653
safB putative fimbriae assembly chaparoneSubName: Full=Putative fimbriae assembly chaparone; chromosome CDS342829 714 + 0.488796
safC putative fimbriae usherSubName: Full=Putative fimbriae usher; chromosome CDS343566 2511 + 0.546794
sipB cell invasion proteinRecName: Full=Cell invasion protein SipB; AltName: Full=Effector protein SipB; chromosome CDS3029114 1782 - 0.523008
spaO surface presentation of antigensRecName: Full=Surface presentation of antigens protein SpaO; chromosome CDS3034335 912 - 0.527412
spaS surface presentation of antigensRecName: Full=Surface presentation of antigens protein SpaS; chromosome CDS3031533 1071 - 0.43324
spy periplasmic protein related to spheroblast formationSubName: Full=Periplasmic protein related to spheroblast formation; chromosome CDS1388557 486 + 0.5
ssaC secretion system apparatus proteinSubName: Full=Secretion system apparatus protein; chromosome CDS1480402 1494 + 0.423025
ssaN secretion system apparatus proteinRecName: Full=Probable secretion system apparatus ATP synthase SsaN; EC=3.6.3.14; chromosome CDS1495691 1302 + 0.512289
ssaQ secretion system apparatus proteinRecName: Full=Secretion system apparatus protein SsaQ; chromosome CDS1497708 969 + 0.46646
sseB secretion system effectorRecName: Full=Secreted effector protein SseB; AltName: Full=Secretion system effector B; chromosome CDS1483934 591 + 0.433164
stbA putative fimbriae; major subunitSubName: Full=Putative fimbriae major subunit; chromosome CDS384403 537 - 0.471136
stbB putative fimbriae; chaparoneSubName: Full=Putative fimbriae chaparone; chromosome CDS383580 762 - 0.454068
stbC putative fimbriae; usherSubName: Full=Putative fimbriae usher; chromosome CDS381035 2562 - 0.539422
stbE putative fimbriae; chaparoneSubName: Full=Putative fimbriae chaparone; chromosome CDS378981 759 - 0.476943
stcB putative periplasmic chaperone proteinSubName: Full=Putative periplasmic chaperone protein; chromosome CDS2246358 684 - 0.402047
stcC putative outer membrane proteinSubName: Full=Putative outer membrane protein; chromosome CDS2243855 2490 - 0.457831
stdA putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS3191120 711 - 0.489451
stdB putative outer membrane usher proteinSubName: Full=Putative outer membrane usher protein; chromosome CDS3188511 2490 - 0.607229
stdC putative fimbrial chaparone proteinSubName: Full=Putative fimbrial chaparone protein; chromosome CDS3187727 744 - 0.58871
stfA putative fimbrial subunitSubName: Full=Putative fimbrial subunit; chromosome CDS230657 561 + 0.520499
stfC putative fimbrial outer membrane usherSubName: Full=Putative fimbrial outer membrane usher; chromosome CDS231303 2658 + 0.549661
stfD putative periplasmic fimbrial chaperoneSubName: Full=Putative periplasmic fimbrial chaperone; chromosome CDS233978 753 + 0.541833
sthA putative fimbrial chaparone proteinSubName: Full=Putative fimbrial chaparone protein; chromosome CDS4852095 684 - 0.461988
sthB putative fimbrial usher proteinSubName: Full=Putative fimbrial usher protein; chromosome CDS4849512 2538 - 0.472025
sthD putative fimbrial subunitSubName: Full=Putative fimbrial subunit; chromosome CDS4848937 558 - 0.505376
sthE putative major fimbrial subunitSubName: Full=Putative major fimbrial subunit; chromosome CDS4847811 1086 - 0.524862
stiA putative fimbrial subunitSubName: Full=Putative fimbrial subunit; chromosome CDS208383 540 - 0.524074
stiB putative fimbrial chaparoneSubName: Full=Putative fimbrial chaparone; chromosome CDS207652 684 - 0.530702
stiC putativie fimbrial usherSubName: Full=Putative fimbrial usher; chromosome CDS205079 2547 - 0.553592
stjB putative fimbrial usher proteinSubName: Full=Putative fimbrial usher protein; chromosome CDS4826467 2409 - 0.493566
stjC putative fimbrial chaparone proteinSubName: Full=Putative fimbrial chaparone protein; chromosome CDS4828889 708 - 0.456215
tcp methyl-accepting transmembrane citrate/phenol chemoreceptorRecName: Full=Methyl-accepting chemotaxis citrate transducer; AltName: Full=Citrate chemoreceptor protein; chromosome CDS3744842 1644 + 0.556569
trg methyl-accepting chemotaxis protein IIISubName: Full=Methyl-accepting chemotaxis protein III; chromosome CDS1715879 1626 - 0.541205
tsr methyl-accepting chemotaxis protein ISubName: Full=Methyl-accepting chemotaxis protein I; chromosome CDS4790082 1662 + 0.551745
yaiU flagellar protein; similar to 3rd module of ATP-binding components of transportersRecName: Full=Uncharacterized protein YaiT; Flags: Precursor; chromosome CDS425165 2937 + 0.462377
yggR putative protein transportSubName: Full=Uncharacterized protein; chromosome CDS3259946 981 - 0.572885
yifL putative outer membrane lipoproteinRecName: Full=Uncharacterized lipoprotein YifL; Flags: Precursor; chromosome CDS4152022 204 + 0.534314
yrfC putative inner membrane proteinSubName: Full=Putative inner membrane protein; chromosome CDS3645214 540 - 0.592593