Gene list
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COG category: Cell motility
Organism: Shigella flexneri 2a str. 301, 301
Number of genes found: 80
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella flexneri 2a str. 301, 301 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SF0943 | putative fimbrial-like protein | chromosome | CDS | 989956 | 543 | + | 0.471455 |
NA | SF0710 | putative tail component of prophage CP-933K | chromosome | CDS | 734622 | 747 | + | 0.555556 |
NA | SF1892 | putative tail component of prophage CP-933K | chromosome | CDS | 1932220 | 741 | - | 0.556005 |
NA | SF0944 | putative fimbrial-like protein | chromosome | CDS | 990458 | 564 | + | 0.473404 |
NA | SF3511 | orf, partial conserved hypothetical protein | chromosome | CDS | 3603586 | 1149 | - | 0.442994 |
NA | SF1205 | putative adhesion and penetration protein | chromosome | CDS | 1249891 | 2868 | - | 0.498954 |
NA | SF2413 | orf, conserved hypothetical protein | chromosome | CDS | 2460544 | 786 | - | 0.529262 |
NA | SF0463 | orf, partial conserved hypothetical protein | chromosome | CDS | 478218 | 501 | + | 0.431138 |
NA | SF3992 | orf, conserved hypothetical protein | chromosome | CDS | 4120936 | 369 | + | 0.479675 |
NA | SF2409 | similar to fimbrial protein | chromosome | CDS | 2458261 | 525 | - | 0.455238 |
cheA | SF1937 | chemotaxis protein CheA | chromosome | CDS | 1971989 | 1965 | - | 0.531807 |
cheB | SF1932 | response regulator for chemotaxis (cheA sensor); protein methylesterase | chromosome | CDS | 1966081 | 1050 | - | 0.537143 |
cheR | SF1933 | response regulator for chemotaxis; protein glutamate methyltransferase | chromosome | CDS | 1967133 | 861 | - | 0.538908 |
cheW | SF1936 | positive regulator of CheA protein activity | chromosome | CDS | 1971465 | 504 | - | 0.515873 |
cheZ | SF1930 | chemotaxis protein CheZ | chromosome | CDS | 1965022 | 645 | - | 0.533333 |
fhiA | SF0278 | flagellar biosynthetic protein FlhA | chromosome | CDS | 295763 | 1740 | - | 0.584483 |
fimA | SF4208 | major type 1 subunit fimbrin (pilin) | chromosome | CDS | 4381556 | 549 | - | 0.510018 |
fimC | SF4206 | periplasmic chaperone | chromosome | CDS | 4380190 | 726 | - | 0.442149 |
fimF | SF4202 | minor fimbrial subunit, precursor polypeptide | chromosome | CDS | 4376171 | 531 | - | 0.489642 |
fimG | SF4201 | minor fimbrial subunit, precursor polypeptide | chromosome | CDS | 4375655 | 504 | - | 0.527778 |
fimI | SF4207 | fimbrial protein | chromosome | CDS | 4380952 | 639 | - | 0.499218 |
flgA | SF1078 | flagellar basal body P-ring protein FlgA precursor | chromosome | CDS | 1117965 | 660 | - | 0.521212 |
flgB | SF1079 | flagellar basal-body rod protein FlgB (proximal rod protein) | chromosome | CDS | 1118779 | 417 | + | 0.539568 |
flgE | SF1080 | flagellar hook protein FlgE | chromosome | CDS | 1119614 | 1929 | + | 0.524624 |
flgG | SF1082 | flagellar basal body rod protein flgG | chromosome | CDS | 1122451 | 783 | + | 0.533844 |
flgH | SF1083 | flagellar basal body L-ring protein FlgH | chromosome | CDS | 1123286 | 699 | + | 0.53505 |
flgI | SF1084 | flagellar basal body P-ring protein FlgI | chromosome | CDS | 1123996 | 1098 | + | 0.533698 |
flgJ | SF1085 | flagellar basal body protein FlgJ | chromosome | CDS | 1125093 | 942 | + | 0.539278 |
flgM | SF1077 | flagellar protein FlgM | chromosome | CDS | 1117596 | 294 | - | 0.530612 |
flgN | SF1076 | flagella synthesis protein FlgN | chromosome | CDS | 1117175 | 417 | - | 0.479616 |
flhB | SF1924 | putative part of export apparatus for flagellar proteins | chromosome | CDS | 1959784 | 1194 | - | 0.551089 |
fliC | SF1966 | flagellin | chromosome | CDS | 1998100 | 1653 | - | 0.482154 |
fliD | SF1967 | flagellar protein FliD | chromosome | CDS | 2000018 | 1407 | + | 0.522388 |
fliE | SF1982 | flagellar hook-basal body 11K protein FliE | chromosome | CDS | 2012670 | 315 | - | 0.549206 |
fliG | SF1984 | flagellar motor switch protein FliG | chromosome | CDS | 2014850 | 996 | + | 0.562249 |
fliH | SF1985 | flagellar assembly protein FliH | chromosome | CDS | 2015838 | 687 | + | 0.572052 |
fliI | SF1986 | flagellum-specific ATP synthase | chromosome | CDS | 2016524 | 1374 | + | 0.580058 |
fliJ | SF1987 | flagellar fliJ protein | chromosome | CDS | 2017916 | 345 | + | 0.498551 |
fliK | SF1988 | flagellar hook-length control protein | chromosome | CDS | 2018257 | 1128 | + | 0.544326 |
fliL | SF1989 | flagellar protein FliL | chromosome | CDS | 2019489 | 465 | + | 0.529032 |
fliM | SF1990 | flagellar motor switch protein FliM | chromosome | CDS | 2019958 | 1005 | + | 0.530348 |
fliN | SF1991 | flagellar motor switch protein FliN | chromosome | CDS | 2020959 | 414 | + | 0.557971 |
fliO | SF1992 | flagellar protein FliO | chromosome | CDS | 2021435 | 306 | + | 0.562092 |
fliP | SF1993 | flagellar biosynthesis | chromosome | CDS | 2021863 | 615 | + | 0.520325 |
fliQ | SF1994 | flagellar biosynthetic protein FliQ | chromosome | CDS | 2022487 | 270 | + | 0.511111 |
fliR | SF1995 | flagellar biosynthetic protein FliR | chromosome | CDS | 2022765 | 786 | + | 0.47201 |
fliS | SF1968 | flagellar protein FliS | chromosome | CDS | 2001449 | 411 | + | 0.481752 |
hofC | SF0103 | putative integral membrane protein | chromosome | CDS | 113024 | 1203 | - | 0.525353 |
hopD | SF3354 | putative leader peptidase | chromosome | CDS | 3438033 | 288 | + | 0.465278 |
lpfA | SF3807 | putative major fimbrial subunit | chromosome | CDS | 3916796 | 573 | - | 0.474695 |
lpfC | SF3723 | putative long polar fimbriae | chromosome | CDS | 3831823 | 2523 | + | 0.470075 |
mbhA | SF0277 | putative motility protein | chromosome | CDS | 297447 | 786 | + | 0.522901 |
motA | SF1939 | proton conductor component of motor | chromosome | CDS | 1974881 | 888 | - | 0.516892 |
motB | SF1938 | chemotaxis protein MotB | chromosome | CDS | 1973958 | 927 | - | 0.530744 |
mxiD | CP0145 | MxiD, outermembrane protein of the secretin family, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 123950 | 1701 | + | 0.33157 |
nfrB | SF0470 | bacteriophage N4 receptor, outer membrane protein | chromosome | CDS | 484845 | 2238 | - | 0.521448 |
ppdD | SF0105 | prelipin peptidase dependent protein | chromosome | CDS | 115373 | 441 | - | 0.530612 |
sfmA | SF0461 | putative fimbrial-like protein | chromosome | CDS | 476700 | 576 | + | 0.4375 |
sfmC | SF0462 | putative chaperone | chromosome | CDS | 477495 | 693 | + | 0.431457 |
spa33 | CP0152 | Spa33, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 131944 | 747 | + | 0.314592 |
spa40 | CP0156 | Spa40, component of the Mxi-Spa secretion machinery | pCP301 | CDS | 134397 | 1029 | + | 0.317784 |
spa47 | CP0149 | Spa47, component of the Mxi-Spa secretion machinery, putative ATPase | pCP301 | CDS | 129227 | 1293 | + | 0.392111 |
spy | SF1483 | periplasmic protein | chromosome | CDS | 1519826 | 486 | + | 0.50823 |
tap | SF1934 | methyl-accepting chemotaxis protein IV, peptide sensor receptor | chromosome | CDS | 1968012 | 1602 | - | 0.538702 |
tar | SF1935 | methyl-accepting chemotaxis protein II, aspartate sensor receptor | chromosome | CDS | 1969659 | 1662 | - | 0.527076 |
trg | SF1789 | methyl-accepting chemotaxis protein III, ribose sensor receptor | chromosome | CDS | 1825835 | 1641 | - | 0.508836 |
tsr | SF4386 | methyl-accepting chemotaxis protein I, serine sensor receptor | chromosome | CDS | 4557945 | 1665 | + | 0.53994 |
ybgD | SF0578 | putative fimbrial-like protein | chromosome | CDS | 604259 | 567 | + | 0.47619 |
ybgP | SF0580 | putative chaperone | chromosome | CDS | 607350 | 732 | + | 0.494536 |
ybgQ | SF0579 | putative outer membrane protein | chromosome | CDS | 604876 | 2460 | + | 0.493902 |
ycbF | SF0945 | putative chaperone | chromosome | CDS | 990987 | 738 | + | 0.509485 |
ycbS | SF0941 | putative outer membrane protein | chromosome | CDS | 986284 | 2601 | + | 0.478278 |
yehB | SF2171 | putative outer membrane protein | chromosome | CDS | 2193959 | 2481 | - | 0.455865 |
yehD | SF2175 | putative fimbrial-like protein | chromosome | CDS | 2197986 | 525 | - | 0.405714 |
yggR | SF2942 | putative transport protein | chromosome | CDS | 3032395 | 1026 | - | 0.540936 |
yifL | SF3886 | putative outer membrane lipoprotein | chromosome | CDS | 4006228 | 204 | + | 0.52451 |
yjaI | SF4074 | orf, conserved hypothetical protein | chromosome | CDS | 4220245 | 567 | - | 0.516755 |
yraI | SF3181 | putative chaperone | chromosome | CDS | 3278961 | 696 | + | 0.448276 |
yraK | SF3186 | putative fimbrial protein | chromosome | CDS | 3283548 | 1092 | + | 0.478938 |
yrfC | SF3412 | orf, conserved hypothetical protein | chromosome | CDS | 3490649 | 540 | - | 0.553704 |