Gene list
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COG category: Cell motility
Organism: Escherichia coli K12, K-12
Number of genes found: 125
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli K12, K-12 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | b2334 | orf, hypothetical protein | chromosome | CDS | 2448609 | 489 | - | 0.466258 |
NA | b2335 | putative fimbrial protein | chromosome | CDS | 2449094 | 513 | - | 0.491228 |
NA | b2337 | putative outer membrane protein | chromosome | CDS | 2450378 | 897 | - | 0.532887 |
NA | b1505 | putative outer membrane protein | chromosome | CDS | 1586877 | 1149 | - | 0.445605 |
NA | b2339 | putative fimbrial-like protein | chromosome | CDS | 2453105 | 564 | - | 0.460993 |
cheA | b1888 | sensory transducer kinase between chemo-signal receptors and CheB and CheY | chromosome | CDS | 1971384 | 1965 | - | 0.531298 |
cheB | b1883 | response regulator for chemotaxis (cheA sensor); protein methylesterase | chromosome | CDS | 1965476 | 1050 | - | 0.542857 |
cheR | b1884 | response regulator for chemotaxis; protein glutamate methyltransferase | chromosome | CDS | 1966528 | 861 | - | 0.542393 |
cheW | b1887 | positive regulator of CheA protein activity | chromosome | CDS | 1970860 | 504 | - | 0.519841 |
cheZ | b1881 | chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator | chromosome | CDS | 1964417 | 645 | - | 0.534884 |
cpxP | b4484 | periplasmic repressor of cpx regulon by interaction with CpxA | chromosome | CDS | 4103843 | 501 | + | 0.500998 |
ecpD | b0140 | probable pilin chaperone similar to PapD | chromosome | CDS | 155461 | 741 | - | 0.443995 |
fhiA | b0229 | flagellar biosynthesis | chromosome | CDS | 248358 | 1740 | - | 0.578736 |
fimA | b4314 | major type 1 subunit fimbrin (pilin) | chromosome | CDS | 4541138 | 549 | + | 0.517304 |
fimC | b4316 | periplasmic chaperone, required for type 1 fimbriae | chromosome | CDS | 4542327 | 726 | + | 0.444904 |
fimD | b4317 | outer membrane protein; export and assembly of type 1 fimbriae, interrupted | chromosome | CDS | 4543119 | 2637 | + | 0.486159 |
fimF | b4318 | fimbrial morphology | chromosome | CDS | 4545765 | 531 | + | 0.495292 |
fimG | b4319 | fimbrial morphology | chromosome | CDS | 4546308 | 504 | + | 0.52381 |
fimI | b4315 | fimbrial protein | chromosome | CDS | 4541643 | 648 | + | 0.49537 |
flgA | b1072 | flagellar biosynthesis; assembly of basal-body periplasmic P ring | chromosome | CDS | 1129427 | 660 | - | 0.522727 |
flgB | b1073 | flagellar biosynthesis, cell-proximal portion of basal-body rod | chromosome | CDS | 1130241 | 417 | + | 0.534772 |
flgC | b1074 | flagellar biosynthesis, cell-proximal portion of basal-body rod | chromosome | CDS | 1130661 | 405 | + | 0.528395 |
flgD | b1075 | flagellar biosynthesis, initiation of hook assembly | chromosome | CDS | 1131077 | 696 | + | 0.545977 |
flgE | b1076 | flagellar biosynthesis, hook protein | chromosome | CDS | 1131797 | 1209 | + | 0.515302 |
flgF | b1077 | flagellar biosynthesis, cell-proximal portion of basal-body rod | chromosome | CDS | 1133025 | 756 | + | 0.59127 |
flgG | b1078 | flagellar biosynthesis, cell-distal portion of basal-body rod | chromosome | CDS | 1133952 | 783 | + | 0.537676 |
flgH | b1079 | flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein | chromosome | CDS | 1134787 | 699 | + | 0.53505 |
flgI | b1080 | homolog of Salmonella P-ring of flagella basal body | chromosome | CDS | 1135497 | 1098 | + | 0.541894 |
flgJ | b1081 | flagellar biosynthesis | chromosome | CDS | 1136594 | 942 | + | 0.546709 |
flgK | b1082 | flagellar biosynthesis, hook-filament junction protein 1 | chromosome | CDS | 1137601 | 1644 | + | 0.518248 |
flgL | b1083 | flagellar biosynthesis; hook-filament junction protein | chromosome | CDS | 1139256 | 954 | + | 0.507338 |
flgM | b1071 | anti-FliA (anti-sigma) factor; also known as RflB protein | chromosome | CDS | 1129058 | 294 | - | 0.527211 |
flgN | b1070 | protein of flagellar biosynthesis | chromosome | CDS | 1128637 | 417 | - | 0.482014 |
flhA | b1879 | flagellar biosynthesis; possible export of flagellar proteins | chromosome | CDS | 1960996 | 2079 | - | 0.548822 |
flhB | b1880 | putative part of export apparatus for flagellar proteins | chromosome | CDS | 1963067 | 1149 | - | 0.549173 |
fliC | b1923 | flagellar biosynthesis; flagellin, filament structural protein | chromosome | CDS | 2000134 | 1497 | - | 0.47495 |
fliD | b1924 | flagellar biosynthesis; filament capping protein; enables filament assembly | chromosome | CDS | 2001896 | 1407 | + | 0.522388 |
fliE | b1937 | flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junction | chromosome | CDS | 2010724 | 315 | - | 0.539683 |
fliF | b1938 | flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein | chromosome | CDS | 2011253 | 1659 | + | 0.546112 |
fliG | b1939 | flagellar biosynthesis, component of motor switching and energizing, enabling rotation and determining its direction | chromosome | CDS | 2012904 | 996 | + | 0.556225 |
fliH | b1940 | flagellar biosynthesis; export of flagellar proteins? | chromosome | CDS | 2013871 | 708 | + | 0.572034 |
fliI | b1941 | flagellum-specific ATP synthase | chromosome | CDS | 2014578 | 1374 | + | 0.585881 |
fliJ | b1942 | flagellar fliJ protein | chromosome | CDS | 2015970 | 444 | + | 0.515766 |
fliK | b1943 | flagellar hook-length control protein | chromosome | CDS | 2016410 | 1128 | + | 0.548759 |
fliL | b1944 | flagellar biosynthesis | chromosome | CDS | 2017642 | 465 | + | 0.533333 |
fliM | b1945 | flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction | chromosome | CDS | 2018111 | 1005 | + | 0.533333 |
fliN | b1946 | flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction | chromosome | CDS | 2019112 | 414 | + | 0.550725 |
fliO | b1947 | flagellar biosynthesis | chromosome | CDS | 2019588 | 306 | + | 0.542484 |
fliP | b1948 | flagellar biosynthesis | chromosome | CDS | 2019893 | 738 | + | 0.531165 |
fliQ | b1949 | flagellar biosynthesis | chromosome | CDS | 2020640 | 270 | + | 0.503704 |
fliR | b1950 | flagellar biosynthesis | chromosome | CDS | 2020917 | 786 | + | 0.474555 |
fliS | b1925 | flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) | chromosome | CDS | 2003327 | 411 | + | 0.498783 |
gspD | b3325 | putative export protein D for general secretion pathway (GSP) | chromosome | CDS | 3454387 | 1965 | + | 0.50229 |
gspE | b3326 | putative export protein E for general secretion pathway (GSP); Type II traffic warden ATPase | chromosome | CDS | 3456361 | 1482 | + | 0.524966 |
gspF | b3327 | putative export protein F for general secretion pathway (GSP) | chromosome | CDS | 3457839 | 1197 | + | 0.510443 |
gspG | b3328 | putative export protein G for general secretion pathway (GSP); pilin-like | chromosome | CDS | 3459045 | 438 | + | 0.486301 |
gspH | b3329 | putative export protein H for general secretion pathway (GSP) | chromosome | CDS | 3459490 | 510 | + | 0.560784 |
gspI | b3330 | putative export protein I for general secretion pathway (GSP) | chromosome | CDS | 3459957 | 417 | + | 0.494005 |
gspL | b3333 | putative export protein L for general secretion pathway (GSP) | chromosome | CDS | 3461941 | 1167 | + | 0.486718 |
gspO | b3335 | bifunctional prepilin peptidase: leader peptidase; N-methyltransferase; part of general secretion pathway (GSP) | chromosome | CDS | 3463565 | 678 | + | 0.504425 |
hofB | b0107 | putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake | chromosome | CDS | 115714 | 1386 | - | 0.534632 |
hofC | b0106 | putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake | chromosome | CDS | 114522 | 1203 | - | 0.519534 |
htrE | b0139 | probable outer membrane porin protein involved in fimbrial assembly | chromosome | CDS | 152829 | 2598 | - | 0.43341 |
mbhA | b0230 | putative motility protein | chromosome | CDS | 250042 | 786 | + | 0.522901 |
motA | b1890 | proton conductor component of motor; no effect on switching | chromosome | CDS | 1974276 | 888 | - | 0.513514 |
motB | b1889 | enables flagellar motor rotation, linking torque machinery to cell wall | chromosome | CDS | 1973353 | 927 | - | 0.531823 |
nfrB | b0569 | bacteriophage N4 receptor, subunit, inner membrane protein | chromosome | CDS | 590164 | 2238 | - | 0.525022 |
ppdA | b2826 | prepilin peptidase dependent protein A | chromosome | CDS | 2961729 | 471 | - | 0.541401 |
ppdC | b2823 | prepilin peptidase dependent protein C | chromosome | CDS | 2960463 | 324 | - | 0.549383 |
ppdD | b0108 | prelipin peptidase dependent protein | chromosome | CDS | 117109 | 441 | - | 0.530612 |
pppA | b2972 | bifunctional prepilin peptidase | chromosome | CDS | 3111565 | 933 | - | 0.519828 |
sfmA | b0530 | putative fimbrial-like protein | chromosome | CDS | 557402 | 576 | + | 0.439236 |
sfmC | b0531 | putative chaperone | chromosome | CDS | 558197 | 693 | + | 0.425685 |
sfmD | b0532 | putative outer membrane protein, export function | chromosome | CDS | 558920 | 2604 | + | 0.478111 |
sfmF | b0534 | putative fimbrial-like protein | chromosome | CDS | 562553 | 516 | + | 0.5 |
sfmH | b0533 | involved in fimbrial asembly | chromosome | CDS | 561565 | 978 | + | 0.453988 |
spy | b1743 | periplasmic protein related to spheroblast formation | chromosome | CDS | 1823164 | 486 | - | 0.50823 |
tap | b1885 | methyl-accepting chemotaxis protein IV, peptide sensor receptor | chromosome | CDS | 1967407 | 1602 | - | 0.535581 |
tar | b1886 | methyl-accepting chemotaxis protein II, aspartate sensor receptor | chromosome | CDS | 1969054 | 1662 | - | 0.527677 |
trg | b1421 | methyl-accepting chemotaxis protein III, ribose sensor receptor | chromosome | CDS | 1490494 | 1641 | + | 0.512492 |
tsr | b4355 | methyl-accepting chemotaxis protein I, serine sensor receptor | chromosome | CDS | 4589680 | 1656 | + | 0.546498 |
ugpC | b3450 | ATP-binding component of sn-glycerol 3-phosphate transport system | chromosome | CDS | 3586133 | 1110 | - | 0.576577 |
wzc | b2060 | tyrosine-protein kinase | chromosome | CDS | 2131514 | 2199 | - | 0.527058 |
yadC | b0135 | putative fimbrial-like protein | chromosome | CDS | 149715 | 1239 | - | 0.403551 |
yadM | b0138 | putative fimbrial-like protein | chromosome | CDS | 152243 | 612 | - | 0.428105 |
yadN | b0141 | putative fimbrial-like protein | chromosome | CDS | 156299 | 585 | - | 0.447863 |
yagX | b0291 | putative enzyme | chromosome | CDS | 306031 | 2526 | - | 0.552652 |
ybaQ | b0483 | orf, hypothetical protein | chromosome | CDS | 507388 | 396 | + | 0.436869 |
ybgD | b0719 | putative fimbrial-like protein | chromosome | CDS | 751452 | 567 | - | 0.467372 |
ybgP | b0717 | putative chaperone | chromosome | CDS | 748202 | 729 | - | 0.477366 |
ybgQ | b0718 | putative outer membrane protein | chromosome | CDS | 748945 | 2457 | - | 0.499797 |
ycbF | b0944 | putative fimbrial chaperone | chromosome | CDS | 1003143 | 738 | + | 0.514905 |
ycbQ | b0938 | putative fimbrial-like protein | chromosome | CDS | 997082 | 549 | + | 0.422587 |
ycbR | b0939 | putative fimbrial chaperone | chromosome | CDS | 997713 | 702 | + | 0.450142 |
ycbS | b0940 | putative outer membrane usher protein | chromosome | CDS | 998439 | 2601 | + | 0.478662 |
ycbU | b0942 | putative fimbrial-like protein | chromosome | CDS | 1002112 | 543 | + | 0.471455 |
ycbV | b0943 | putative fimbrial-like protein | chromosome | CDS | 1002614 | 564 | + | 0.473404 |
ycjV | b1318 | putative ATP-binding component of a transport system | chromosome | CDS | 1378845 | 969 | + | 0.505676 |
ydeR | b1503 | putative fimbrial-like protein | chromosome | CDS | 1585817 | 504 | - | 0.448413 |
ydeS | b1504 | putative fimbrial-like protein | chromosome | CDS | 1586333 | 531 | - | 0.448211 |
yegH | b2063 | putative transport protein | chromosome | CDS | 2135860 | 1650 | + | 0.524848 |
yehB | b2109 | putative outer membrane protein | chromosome | CDS | 2186452 | 2481 | - | 0.455058 |
yehC | b2110 | putative chaperone | chromosome | CDS | 2188948 | 720 | - | 0.393056 |
yehD | b2111 | putative fimbrial-like protein | chromosome | CDS | 2189702 | 543 | - | 0.405157 |
yfcP | b2333 | putative fimbrial-like protein | chromosome | CDS | 2448073 | 540 | - | 0.487037 |
yfcS | b2336 | putative chaperone | chromosome | CDS | 2449606 | 753 | - | 0.50996 |
yfcU | b2338 | putative outer membrane protein | chromosome | CDS | 2451287 | 1737 | - | 0.510075 |
yfjI | b2625 | orf, hypothetical protein | chromosome | CDS | 2757007 | 1410 | + | 0.379433 |
yggR | b2950 | putative protein transport | chromosome | CDS | 3092122 | 1026 | - | 0.549708 |
yghE | b2969 | putative general secretion pathway for protein export (GSP) | chromosome | CDS | 3109150 | 861 | - | 0.57259 |
ygiL | b3043 | putative fimbrial-like protein | chromosome | CDS | 3183436 | 552 | + | 0.436594 |
yhcA | b3215 | putative chaperone | chromosome | CDS | 3360134 | 675 | + | 0.416296 |
yhcD | b3216 | putative outer membrane protein | chromosome | CDS | 3360829 | 2382 | + | 0.45508 |
ymfL | b1147 | hypothetical protein in lambdoid prophage e14 region | chromosome | CDS | 1202479 | 570 | + | 0.494737 |
ynaA | b1368 | putative alpha helix protein | chromosome | CDS | 1424478 | 1029 | + | 0.468416 |
yohG | b2138 | putative channel/filament proteins | chromosome | CDS | 2225345 | 1197 | - | 0.558062 |
yqiG | b3046 | putative membrane protein | chromosome | CDS | 3185422 | 2466 | + | 0.422141 |
yqiH | b3047 | putative membrane protein | chromosome | CDS | 3187894 | 759 | + | 0.384717 |
yraH | b3142 | putative fimbrial-like protein | chromosome | CDS | 3285448 | 585 | + | 0.451282 |
yraI | b3143 | putative chaperone | chromosome | CDS | 3286112 | 696 | + | 0.442529 |
yraJ | b3144 | putative outer membrane protein | chromosome | CDS | 3286836 | 2517 | + | 0.475963 |
yraK | b3145 | putative fimbrial protein | chromosome | CDS | 3289363 | 1092 | + | 0.478938 |
yrfB | b3393 | orf, hypothetical protein | chromosome | CDS | 3519031 | 441 | - | 0.546485 |
yrfC | b3394 | orf, hypothetical protein | chromosome | CDS | 3519455 | 540 | - | 0.553704 |
zraP | b4002 | Zn-binding periplasmic protein | chromosome | CDS | 4199286 | 567 | - | 0.516755 |