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2024-05-17 10:01:03

Gene list

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COG category: Cell motility
Organism: Escherichia coli O157:H7 EDL933, EDL933

Number of genes found: 135

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Escherichia coli O157:H7 EDL933, EDL933
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Z1538 putative pilin subunitSubName: Full=Putative major pilin protein; SubName: Full=Putative pilin subunit; chromosome CDS1431089 561 - 0.511586
NA Z3598 putative minor fimbrial subunitSubName: Full=Putative minor fimbrial subunit; chromosome CDS3247476 594 - 0.515152
NA Z4971 putative major fimbrial subunitRecName: Full=Probable major fimbrial subunit LpfA; Flags: Precursor; chromosome CDS4524740 537 - 0.463687
NA Z1289 partial fimbrial usher proteinRecName: Full=Probable outer membrane usher protein ElfC; Flags: Precursor; chromosome CDS1218549 1962 + 0.482161
NA Z1894 putative tail component of prophage CP-933XSubName: Full=Putative tail component of prophage CP-933X; chromosome CDS1722793 771 + 0.575875
NA Z2205 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS1978930 504 + 0.446429
NA Z1534 putative chaperoneSubName: Full=Putative chaperone; chromosome CDS1425691 690 - 0.462319
NA Z4967 putative fimbrial usherRecName: Full=Probable outer membrane usher protein LpfC; chromosome CDS4521387 1458 - 0.514403
NA Z0023 putative chaperone proteinSubName: Full=Putative chaperone protein; SubName: Full=Putative fimbrial chaperone; chromosome CDS21762 684 - 0.365497
NA Z5225 putative major fimbrial subuitSubName: Full=Putative major fimbrial subuit; SubName: Full=Putative type 1 fimbrial protein; chromosome CDS4772963 603 - 0.44942
NA Z5325 RecName: Full=Uncharacterized lipoprotein YifL; Flags: Precursor; chromosome CDS4856943 204 + 0.519608
NA Z2137 putative tail component of prophage CP-933OSubName: Full=Putative tail component of prophage CP-933O; chromosome CDS1915178 630 + 0.547619
NA Z4969 putative fimbrial chaperoneRecName: Full=Probable fimbrial chaperone LpfB; Flags: Precursor; chromosome CDS4523989 699 - 0.424893
NA Z4197 type III secretion apparatus proteinSubName: Full=Type III secretion apparatus protein; SubName: Full=Type III secretion protein EivG; chromosome CDS3799739 1704 - 0.387911
NA Z2358 putative tail component of prophage CP-933RSubName: Full=Putative tail component of prophage CP-933R; chromosome CDS2131009 663 - 0.547511
NA Z1292 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS1222086 564 + 0.475177
NA Z2200 putative major fimbrial subunitSubName: Full=Putative major fimbrial subunit; SubName: Full=Putative type 1 fimbrial protein; chromosome CDS1974046 564 + 0.466312
NA Z3596 putative minor fimbrial subunitSubName: Full=Putative minor fimbrial subunit; chromosome CDS3246491 522 - 0.44636
NA Z1491 unknown protein encoded by bacteriophage BP-933WSubName: Full=Uncharacterized protein; chromosome CDS1377180 657 + 0.531202
NA Z1291 SubName: Full=Uncharacterized protein; chromosome CDS1221650 477 + 0.48847
NA Z4504 partial putative fimbrial proteinSubName: Full=Partial putative fimbrial protein; chromosome CDS4101655 492 + 0.48374
NA Z1288 partial fimbrial usher proteinRecName: Full=Probable outer membrane usher protein ElfC; Flags: Precursor; chromosome CDS1217911 603 + 0.461028
NA Z3601 putative major fimbrial subunitSubName: Full=Putative fimbrial-like protein; SubName: Full=Putative major fimbrial subunit; chromosome CDS3251489 564 - 0.473404
NA Z5222 putative fimbrial usherSubName: Full=Putative fimbrial usher; SubName: Full=Putative outer membrane usher protein; chromosome CDS4769618 2535 - 0.485207
NA Z5224 putative fimbrial chaperoneSubName: Full=Putative fimbrial chaperone; chromosome CDS4772476 384 - 0.382812
NA Z2202 putative outer membrane proteinRecName: Full=Putative uncharacterized protein ydet; chromosome CDS1977225 1149 + 0.449086
NA Z0972 putative tail component of prophage CP-933KSubName: Full=Putative tail component of prophage CP-933K; chromosome CDS913399 750 + 0.557333
NA Z2204 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS1978387 531 + 0.455744
NA Z3087 putative tail fiber component V of prophage CP-933USubName: Full=Putative tail fiber component V of prophage CP-933U; SubName: Full=Uncharacterized protein; chromosome CDS2757898 753 - 0.552457
NA Z0024 putative type-1 fimbrial proteinSubName: Full=Putative fimbrial protein; SubName: Full=Putative type-1 fimbrial protein; chromosome CDS22495 534 - 0.391386
NA Z5138 SubName: Full=Uncharacterized protein; chromosome CDS4688209 324 - 0.314815
NA Z2201 putative fimbrial chaperone proteinSubName: Full=Putative fimbrial chaperone protein; chromosome CDS1974961 720 + 0.459722
NA Z2203 putative fimbrial usher proteinSubName: Full=Putative fimbrial usher protein; chromosome CDS1975722 2652 + 0.44457
NA Z4194 type III secretion apparatus proteinSubName: Full=Type III secretion apparatus protein; SubName: Full=Type III secretion protein ATP synthetase EivC; chromosome CDS3795212 1320 - 0.446212
NA Z5223 putative fimbrial chaperoneSubName: Full=Putative fimbrial chaperone; SubName: Full=Uncharacterized protein; chromosome CDS4772174 162 - 0.41358
NA Z4965 putative fimbrial subunitRecName: Full=Probable fimbrial subunit LpfE; Flags: Precursor; chromosome CDS4519782 531 - 0.512241
NA Z4968 putative fimbrial usherRecName: Full=Probable outer membrane usher protein LpfC; Flags: Precursor; chromosome CDS4522857 1104 - 0.514493
NA Z4185 putative integral membrane protein-component of type III secretion apparatusSubName: Full=Putative integral membrane protein-component of type III secretion apparatus; SubName: Full=Type III secretion protein EprS; chromosome CDS3790140 1122 - 0.33066
NA Z1536 putative usher proteinSubName: Full=Putative usher protein; chromosome CDS1427727 2523 - 0.512485
NA Z0022 putative usher proteinSubName: Full=Putative outer membrane usher protein; SubName: Full=Putative usher protein; chromosome CDS19299 2451 - 0.410037
NA Z3597 putative minor fimbrial subunitSubName: Full=Putative fimbrial protein; SubName: Full=Putative minor fimbrial subunit; chromosome CDS3247009 471 - 0.464968
NA Z1478 unknown protein encoded by bacteriophage BP-933WSubName: Full=Uncharacterized protein; chromosome CDS1364398 1008 + 0.531746
NA Z3600 putative fimbrial usher chromosome CDS3248768 2640 - 0.544318
NA Z5220 putative fimbrial proteinSubName: Full=Putative fimbrial protein; chromosome CDS4767426 1083 - 0.437673
NA Z1537 putative chaperoneSubName: Full=Putative chaperone; chromosome CDS1430302 723 - 0.457815
NA Z4190 typeIII secretion apparatus proteinSubName: Full=Type III secretion protein EpaO; SubName: Full=TypeIII secretion apparatus protein; chromosome CDS3792965 987 - 0.356636
cheA Z2942 sensory transducer kinase between chemo-signal receptors and CheB and CheYSubName: Full=Sensory transducer kinase CheA; SubName: Full=Sensory transducer kinase between chemo-signal receptors and CheB and CheY; chromosome CDS2650499 1965 - 0.53028
cheB Z2937 response regulator for chemotaxis (cheA sensor); protein methylesteraseRecName: Full=Chemotaxis response regulator protein-glutamate methylesterase; EC=3.1.1.61; chromosome CDS2644593 1050 - 0.539048
cheR Z2938 response regulator for chemotaxis; protein glutamate methyltransferaseRecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; chromosome CDS2645645 861 - 0.54007
cheW Z2941 positive regulator of CheA protein activityRecName: Full=Chemotaxis protein CheW; chromosome CDS2649975 504 - 0.511905
cheZ Z2935 chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulatorRecName: Full=Protein phosphatase CheZ; EC=3.1.3.-; AltName: Full=Chemotaxis protein CheZ; chromosome CDS2643534 645 - 0.534884
ecpD Z0151 putative fimbrial chaperone proteinSubName: Full=Putative fimbrial chaperone protein; chromosome CDS159884 732 - 0.483607
escC Z5126 escCSubName: Full=EscC; SubName: Full=Type III secretion system EscC protein; SubName: Full=Type III secretion system protein EscC; chromosome CDS4680359 1539 + 0.373619
escN Z5119 escNSubName: Full=EscN; SubName: Full=Type III secretion system protein EscN; chromosome CDS4674677 1341 - 0.443699
espB Z5105 secreted protein EspBSubName: Full=EspB; SubName: Full=EspB protein; SubName: Full=Secreted protein EspB; chromosome CDS4660026 939 - 0.474973
fhiA Z0290 flagellar biosynthesisSubName: Full=Flagellar biosynthesis; chromosome CDS286245 1740 - 0.585057
fimA Z5912 major type 1 subunit fimbrin (pilin)SubName: Full=Major type 1 subunit fimbrin (Pilin); chromosome CDS5428009 549 + 0.517304
fimC Z5914 periplasmic chaperone, required for type 1 fimbriaeSubName: Full=Periplasmic chaperone required for type 1 fimbriae; SubName: Full=Periplasmic chaperone, required for type 1 fimbriae; chromosome CDS5429198 726 + 0.444904
fimD Z5915 outer membrane protein; export and assembly of type 1 fimbriae, interruptedSubName: Full=Outer membrane protein export and assembly of type 1 fimbriae, interrupted; chromosome CDS5429990 2637 + 0.483125
fimF Z5916 fimbrial morphologySubName: Full=Fimbrial morphology; chromosome CDS5432636 531 + 0.493409
fimG Z5917 fimbrial morphologySubName: Full=Fimbrial morphology; chromosome CDS5433179 504 + 0.525794
fimI Z5913 fimbrial proteinSubName: Full=Fimbrial protein; chromosome CDS5428514 648 + 0.496914
flgA Z1710 flagellar biosynthesis; assembly of basal-body periplasmic P ringSubName: Full=Flagella basal body P-ring formation protein FlgA; SubName: Full=Flagellar biosynthesis assembly of basal-body periplasmic P ring; chromosome CDS1574434 660 - 0.522727
flgB Z1711 flagellar biosynthesis, cell-proximal portion of basal-body rodRecName: Full=Flagellar basal body rod protein FlgB; chromosome CDS1575248 417 + 0.532374
flgC Z1712 flagellar biosynthesis, cell-proximal portion of basal-body rodRecName: Full=Flagellar basal-body rod protein FlgC; AltName: Full=Putative proximal rod protein; chromosome CDS1575668 405 + 0.528395
flgD Z1713 flagellar biosynthesis, initiation of hook assemblySubName: Full=Flagellar biosynthesis, initiation of hook assembly; chromosome CDS1576084 696 + 0.54454
flgE Z1714 flagellar biosynthesis, hook proteinSubName: Full=Flagellar biosynthesis, hook protein; SubName: Full=Flagellar hook protein FlgE; chromosome CDS1576804 1206 + 0.517413
flgF Z1715 flagellar biosynthesis, cell-proximal portion of basal-body rodSubName: Full=Flagellar biosynthesis, cell-proximal portion of basal-body rod; SubName: Full=Flagellar rod protein flgF; chromosome CDS1578029 756 + 0.593915
flgG Z1716 flagellar biosynthesis, cell-distal portion of basal-body rodRecName: Full=Flagellar basal-body rod protein FlgG; AltName: Full=Distal rod protein; chromosome CDS1578922 783 + 0.538953
flgH Z1717 flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring proteinRecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor; chromosome CDS1579757 699 + 0.530758
flgI Z1718 homolog of Salmonella P-ring of flagella basal bodyRecName: Full=Flagellar P-ring protein; AltName: Full=Basal body P-ring protein; Flags: Precursor; chromosome CDS1580467 1098 + 0.541894
flgJ Z1719 flagellar biosynthesisRecName: Full=Peptidoglycan hydrolase FlgJ; EC=3.2.1.-; AltName: Full=Muramidase FlgJ; chromosome CDS1581564 942 + 0.547771
flgK Z1720 flagellar biosynthesis, hook-filament junction protein 1SubName: Full=Flagellar biosynthesis, hook-filament junction protein 1; SubName: Full=Flagellar hook-filament junction protein 1 FlgK; chromosome CDS1582571 1644 + 0.517032
flgL Z1721 flagellar biosynthesis; hook-filament junction proteinSubName: Full=Flagellar biosynthesis hook-filament junction protein; SubName: Full=Flagellar hook-filament junction protein 3 FlgL; chromosome CDS1584226 954 + 0.509434
flgM Z1709 anti-FliA (anti-sigma) factor; also known as RflB proteinSubName: Full=Anti-FliA (Anti-sigma) factor also known as RflB protein; SubName: Full=Flagellin synthesis regulatory protein sigma-28 inhibitor flgM; chromosome CDS1574065 294 - 0.517007
flgN Z1708 protein of flagellar biosynthesisSubName: Full=Protein of flagellar biosynthesis; chromosome CDS1573644 417 - 0.479616
flhA Z2932 flagellar biosynthesis; possible export of flagellar proteinsSubName: Full=Flagellar biosynthesis possible export of flagellar proteins; SubName: Full=Flagellar biosynthesis protein FlhA; chromosome CDS2640113 2079 - 0.545455
flhB Z2934 putative part of export apparatus for flagellar proteinsSubName: Full=Putative part of export apparatus for flagellar proteins; chromosome CDS2642184 1149 - 0.547433
fliC Z3013 flagellar biosynthesis; flagellin, filament structural proteinSubName: Full=Flagellar biosynthesis flagellin, filament structural protein; chromosome CDS2699591 1758 - 0.485779
fliD Z3014 flagellar biosynthesis; filament capping protein; enables filament assemblyRecName: Full=Flagellar hook-associated protein 2; Short=HAP2; AltName: Full=Filament cap protein; AltName: Full=Flagellar cap protein; chromosome CDS2701614 1398 + 0.52432
fliE Z3027 flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junctionRecName: Full=Flagellar hook-basal body complex protein FliE; chromosome CDS2712396 315 - 0.536508
fliF Z3028 flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar proteinRecName: Full=Flagellar M-ring protein; chromosome CDS2712925 1659 + 0.545509
fliG Z3029 flagellar biosynthesis, component of motor switching and energizing, enabling rotation and determining its directionRecName: Full=Flagellar motor switch protein FliG; chromosome CDS2714576 996 + 0.558233
fliH Z3030 flagellar biosynthesis; export of flagellar proteins?SubName: Full=Flagellar assembly protein FliH; SubName: Full=Flagellar biosynthesis export of flagellar proteins; chromosome CDS2715543 708 + 0.572034
fliI Z3031 flagellum-specific ATP synthaseSubName: Full=Flagellum-specific ATP synthase; chromosome CDS2716195 1491 + 0.585513
fliJ Z3032 flagellar fliJ proteinSubName: Full=Flagellar fliJ protein; chromosome CDS2717704 444 + 0.529279
fliK Z3033 flagellar hook-length control proteinSubName: Full=Flagellar hook-length control protein; chromosome CDS2718144 1128 + 0.545213
fliL Z3034 flagellar biosynthesisRecName: Full=Flagellar protein FliL; chromosome CDS2719377 465 + 0.533333
fliM Z3035 flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its directionRecName: Full=Flagellar motor switch protein FliM; chromosome CDS2719846 1005 + 0.529353
fliN Z3036 flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its directionSubName: Full=Flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction; SubName: Full=Flagellar motor switch protein FliN; chromosome CDS2720847 414 + 0.550725
fliO Z3037 flagelar biosynthesisSubName: Full=Flagelar biosynthesis; SubName: Full=Flagellar protein FliO; chromosome CDS2721323 306 + 0.552288
fliP Z3038 flagellar biosynthesisRecName: Full=Flagellar biosynthetic protein FliP; Flags: Precursor; chromosome CDS2721628 738 + 0.533875
fliQ Z3039 flagellar biosynthesisRecName: Full=Flagellar biosynthetic protein FliQ; chromosome CDS2722375 270 + 0.503704
fliR Z3040 flagellar biosynthesisRecName: Full=Flagellar biosynthetic protein fliR; chromosome CDS2722652 786 + 0.477099
fliS Z3015 flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity)SubName: Full=Flagellar biosynthesis repressor of class 3a and 3b operons (RflA activity); chromosome CDS2703036 411 + 0.491484
hofB Z0117 putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptakeSubName: Full=Putative integral membrane protein HofB; SubName: Full=Putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake; chromosome CDS120204 1386 - 0.540404
hofC Z0116 putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptakeSubName: Full=Putative integral membrane protein HofC; SubName: Full=Putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake; chromosome CDS119012 1203 - 0.522028
hopD Z4693 putative leader peptidaseSubName: Full=Leader peptidase HopD; SubName: Full=Putative leader peptidase; chromosome CDS4255883 468 + 0.478632
htrE Z0150 putative fimbrial usher proteinSubName: Full=Putative fimbrial usher protein; chromosome CDS157242 2499 - 0.488595
mbhA Z0291 putative motility proteinSubName: Full=Putative motility protein; chromosome CDS287929 786 + 0.52799
motA Z2944 proton conductor component of motor; no effect on switchingSubName: Full=Proton conductor component of motor; SubName: Full=Proton conductor component of motor no effect on switching; chromosome CDS2653391 888 - 0.512387
motB Z2943 enables flagellar motor rotation, linking torque machinery to cell wallRecName: Full=Motility protein B; AltName: Full=Chemotaxis protein MotB; chromosome CDS2652468 927 - 0.530744
nfrB Z0699 bacteriophage N4 receptor, outer membrane proteinRecName: Full=Bacteriophage N4 adsorption protein B; chromosome CDS661792 2238 - 0.524129
ppdA Z4143 prepilin peptidase dependent protein ASubName: Full=Prepilin peptidase dependent protein A; chromosome CDS3753405 471 - 0.535032
ppdD Z0118 prelipin peptidase dependent proteinSubName: Full=Prelipin peptidase dependent protein; chromosome CDS121599 441 - 0.53288
sfmA Z0686 putative fimbrial-like proteinRecName: Full=Uncharacterized fimbrial-like protein SfmA; AltName: Full=Type-1A pilin; Flags: Precursor; chromosome CDS650325 576 + 0.439236
sfmC Z0688 putative chaperoneSubName: Full=Putative chaperone; chromosome CDS651120 693 + 0.421356
sfmD Z0689 putative outer membrane protein, export functionSubName: Full=Putative outer membrane protein, export function; chromosome CDS651843 2610 + 0.477012
sfmF Z0691 putative fimbrial proteinSubName: Full=Putative fimbrial protein; SubName: Full=Putative fimbrial-like protein; chromosome CDS655483 516 + 0.496124
spy Z2775 periplasmic protein related to spheroblast formationSubName: Full=Periplasmic protein related to spheroblast formation; SubName: Full=Spheroplast protein Y; chromosome CDS2499855 486 - 0.506173
tap Z2939 methyl-accepting chemotaxis protein IV, peptide sensor receptorSubName: Full=Methyl-accepting chemotaxis protein IV; SubName: Full=Methyl-accepting chemotaxis protein IV, peptide sensor receptor; chromosome CDS2646524 1602 - 0.536829
tar Z2940 methyl-accepting chemotaxis protein II, aspartate sensor receptorSubName: Full=Methyl-accepting chemotaxis protein II, aspartate sensor receptor; chromosome CDS2648171 1662 - 0.523466
trg Z2300 methyl-accepting chemotaxis protein III, ribose sensor receptorSubName: Full=Methyl-accepting chemotaxis protein III; SubName: Full=Methyl-accepting chemotaxis protein III, ribose sensor receptor; chromosome CDS2076859 1641 - 0.511274
tsr Z5955 methyl-accepting chemotaxis protein I, serine sensor receptorSubName: Full=Methyl-accepting chemotaxis protein I, serine sensor receptor; chromosome CDS5480000 1665 + 0.539339
yadN Z0152 putative fimbrial proteinSubName: Full=Putative fimbrial protein; chromosome CDS160696 606 - 0.458746
yagX Z0358 putative enzymeRecName: Full=Probable outer membrane usher protein EcpC; Flags: Precursor; chromosome CDS339216 2526 - 0.550277
ybgD Z0872 putative fimbriae structural proteinSubName: Full=Putative fimbriae structural protein; chromosome CDS830531 567 - 0.45679
ybgP Z0869 putative chaperoneSubName: Full=Putative chaperone; chromosome CDS827276 732 - 0.525956
ybgQ Z0871 putative outer membrane usher proteinSubName: Full=Putative outer membrane usher protein; chromosome CDS828310 2163 - 0.507166
ycbF Z1293 putative chaperoneSubName: Full=Putative chaperone; SubName: Full=Uncharacterized protein; chromosome CDS1222615 570 + 0.515789
ycbQ Z1286 putative fimbrial-like proteinRecName: Full=Laminin-binding fimbrial subunit ElfA; AltName: Full=ELF; Flags: Precursor; chromosome CDS1216554 549 + 0.420765
ycbR Z1287 putative chaperoneRecName: Full=Probable fimbrial chaperone protein ElfD; Flags: Precursor; chromosome CDS1217185 702 + 0.457265
yehB Z3277 putative outer membrane proteinSubName: Full=Putative outer membrane protein; chromosome CDS2934385 2481 - 0.448206
yehC Z3278 putative chaperone proteinSubName: Full=Putative chaperone protein; chromosome CDS2936881 723 - 0.394191
yehD Z3279 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS2937643 543 - 0.38674
yfaL Z3487 putative ATP-binding component of a transport systemSubName: Full=Putative ATP-binding component of a transport system; chromosome CDS3137469 3753 - 0.513189
yfcS Z3599 putative fimbrial chaperoneSubName: Full=Putative chaperone; SubName: Full=Putative fimbrial chaperone; chromosome CDS3247987 759 - 0.527009
yfjD Z3906 putative transport proteinSubName: Full=Putative transport protein; chromosome CDS3539235 684 + 0.513158
yggR Z4295 putative protein transportSubName: Full=Uncharacterized protein; chromosome CDS3902918 1026 - 0.546784
yiiO Z5458 SubName: Full=Uncharacterized protein; chromosome CDS4974541 504 + 0.498016
yjaI Z5578 orf, hypothetical proteinRecName: Full=Zinc resistance-associated protein; Flags: Precursor; chromosome CDS5078834 567 - 0.516755
yraH Z4498 putative fimbrial-like proteinSubName: Full=Putative fimbrial-like protein; chromosome CDS4096182 585 + 0.459829
yraI Z4499 putative chaperoneSubName: Full=Putative chaperone; chromosome CDS4096846 696 + 0.441092
yraJ Z4500 putative outer membrane proteinSubName: Full=Putative outer membrane protein; chromosome CDS4097570 2517 + 0.474374
yrfC Z4748 orf, hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4300851 540 - 0.546296