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2024-05-02 23:53:00

Gene list

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COG category: Cell motility
Organism: Escherichia coli O157:H7 EDL933, EDL933

Number of genes found: 135

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli O157:H7 EDL933, EDL933
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Z4504 partial putative fimbrial proteinchromosome CDS4101655 492 + 0.48374
NA Z2203 putative fimbrial usher proteinchromosome CDS1975722 2652 + 0.44457
NA Z1292 putative fimbrial-like proteinchromosome CDS1222086 564 + 0.475177
NA Z5220 putative fimbrial proteinchromosome CDS4767426 1083 - 0.437673
NA Z3601 putative major fimbrial subunitchromosome CDS3251489 564 - 0.473404
NA Z0024 putative type-1 fimbrial proteinchromosome CDS22495 534 - 0.391386
NA Z3597 putative minor fimbrial subunitchromosome CDS3247009 471 - 0.464968
NA Z4968 putative fimbrial usherchromosome CDS4522857 1104 - 0.514493
NA Z0023 putative chaperone proteinchromosome CDS21762 684 - 0.365497
NA Z3598 putative minor fimbrial subunitchromosome CDS3247476 594 - 0.515152
NA Z0022 putative usher proteinchromosome CDS19299 2451 - 0.410037
NA Z4965 putative fimbrial subunitchromosome CDS4519782 531 - 0.512241
NA Z5224 putative fimbrial chaperonechromosome CDS4772476 384 - 0.382812
NA Z3600 putative fimbrial usherchromosome CDS3248768 2640 - 0.544318
NA Z4190 typeIII secretion apparatus proteinchromosome CDS3792965 987 - 0.356636
NA Z2137 putative tail component of prophage CP-933Ochromosome CDS1915178 630 + 0.547619
NA Z1538 putative pilin subunitchromosome CDS1431089 561 - 0.511586
NA Z1478 unknown protein encoded by bacteriophage BP-933Wchromosome CDS1364398 1008 + 0.531746
NA Z3087 putative tail fiber component V of prophage CP-933Uchromosome CDS2757898 753 - 0.552457
NA Z1491 unknown protein encoded by bacteriophage BP-933Wchromosome CDS1377180 657 + 0.531202
NA Z2358 putative tail component of prophage CP-933Rchromosome CDS2131009 663 - 0.547511
NA Z2204 putative fimbrial-like proteinchromosome CDS1978387 531 + 0.455744
NA Z5223 putative fimbrial chaperonechromosome CDS4772174 162 - 0.41358
NA Z1288 partial fimbrial usher proteinchromosome CDS1217911 603 + 0.461028
NA Z0972 putative tail component of prophage CP-933Kchromosome CDS913399 750 + 0.557333
NA Z4194 type III secretion apparatus proteinchromosome CDS3795212 1320 - 0.446212
NA Z4967 putative fimbrial usherchromosome CDS4521387 1458 - 0.514403
NA Z2200 putative major fimbrial subunitchromosome CDS1974046 564 + 0.466312
NA Z4197 type III secretion apparatus proteinchromosome CDS3799739 1704 - 0.387911
NA Z1291 chromosome CDS1221650 477 + 0.48847
NA Z5325 chromosome CDS4856943 204 + 0.519608
NA Z2205 putative fimbrial-like proteinchromosome CDS1978930 504 + 0.446429
NA Z2202 putative outer membrane proteinchromosome CDS1977225 1149 + 0.449086
NA Z5138 chromosome CDS4688209 324 - 0.314815
NA Z1534 putative chaperonechromosome CDS1425691 690 - 0.462319
NA Z1536 putative usher proteinchromosome CDS1427727 2523 - 0.512485
NA Z4971 putative major fimbrial subunitchromosome CDS4524740 537 - 0.463687
NA Z1537 putative chaperonechromosome CDS1430302 723 - 0.457815
NA Z5225 putative major fimbrial subuitchromosome CDS4772963 603 - 0.44942
NA Z4969 putative fimbrial chaperonechromosome CDS4523989 699 - 0.424893
NA Z1289 partial fimbrial usher proteinchromosome CDS1218549 1962 + 0.482161
NA Z4185 putative integral membrane protein-component of type III secretion apparatuschromosome CDS3790140 1122 - 0.33066
NA Z3596 putative minor fimbrial subunitchromosome CDS3246491 522 - 0.44636
NA Z2201 putative fimbrial chaperone proteinchromosome CDS1974961 720 + 0.459722
NA Z1894 putative tail component of prophage CP-933Xchromosome CDS1722793 771 + 0.575875
NA Z5222 putative fimbrial usherchromosome CDS4769618 2535 - 0.485207
cheA Z2942 sensory transducer kinase between chemo-signal receptors and CheB and CheYchromosome CDS2650499 1965 - 0.53028
cheB Z2937 response regulator for chemotaxis (cheA sensor); protein methylesterasechromosome CDS2644593 1050 - 0.539048
cheR Z2938 response regulator for chemotaxis; protein glutamate methyltransferasechromosome CDS2645645 861 - 0.54007
cheW Z2941 positive regulator of CheA protein activitychromosome CDS2649975 504 - 0.511905
cheZ Z2935 chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulatorchromosome CDS2643534 645 - 0.534884
ecpD Z0151 putative fimbrial chaperone proteinchromosome CDS159884 732 - 0.483607
escC Z5126 escCchromosome CDS4680359 1539 + 0.373619
escN Z5119 escNchromosome CDS4674677 1341 - 0.443699
espB Z5105 secreted protein EspBchromosome CDS4660026 939 - 0.474973
fhiA Z0290 flagellar biosynthesischromosome CDS286245 1740 - 0.585057
fimA Z5912 major type 1 subunit fimbrin (pilin)chromosome CDS5428009 549 + 0.517304
fimC Z5914 periplasmic chaperone, required for type 1 fimbriaechromosome CDS5429198 726 + 0.444904
fimD Z5915 outer membrane protein; export and assembly of type 1 fimbriae, interruptedchromosome CDS5429990 2637 + 0.483125
fimF Z5916 fimbrial morphologychromosome CDS5432636 531 + 0.493409
fimG Z5917 fimbrial morphologychromosome CDS5433179 504 + 0.525794
fimI Z5913 fimbrial proteinchromosome CDS5428514 648 + 0.496914
flgA Z1710 flagellar biosynthesis; assembly of basal-body periplasmic P ringchromosome CDS1574434 660 - 0.522727
flgB Z1711 flagellar biosynthesis, cell-proximal portion of basal-body rodchromosome CDS1575248 417 + 0.532374
flgC Z1712 flagellar biosynthesis, cell-proximal portion of basal-body rodchromosome CDS1575668 405 + 0.528395
flgD Z1713 flagellar biosynthesis, initiation of hook assemblychromosome CDS1576084 696 + 0.54454
flgE Z1714 flagellar biosynthesis, hook proteinchromosome CDS1576804 1206 + 0.517413
flgF Z1715 flagellar biosynthesis, cell-proximal portion of basal-body rodchromosome CDS1578029 756 + 0.593915
flgG Z1716 flagellar biosynthesis, cell-distal portion of basal-body rodchromosome CDS1578922 783 + 0.538953
flgH Z1717 flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring proteinchromosome CDS1579757 699 + 0.530758
flgI Z1718 homolog of Salmonella P-ring of flagella basal bodychromosome CDS1580467 1098 + 0.541894
flgJ Z1719 flagellar biosynthesischromosome CDS1581564 942 + 0.547771
flgK Z1720 flagellar biosynthesis, hook-filament junction protein 1chromosome CDS1582571 1644 + 0.517032
flgL Z1721 flagellar biosynthesis; hook-filament junction proteinchromosome CDS1584226 954 + 0.509434
flgM Z1709 anti-FliA (anti-sigma) factor; also known as RflB proteinchromosome CDS1574065 294 - 0.517007
flgN Z1708 protein of flagellar biosynthesischromosome CDS1573644 417 - 0.479616
flhA Z2932 flagellar biosynthesis; possible export of flagellar proteinschromosome CDS2640113 2079 - 0.545455
flhB Z2934 putative part of export apparatus for flagellar proteinschromosome CDS2642184 1149 - 0.547433
fliC Z3013 flagellar biosynthesis; flagellin, filament structural proteinchromosome CDS2699591 1758 - 0.485779
fliD Z3014 flagellar biosynthesis; filament capping protein; enables filament assemblychromosome CDS2701614 1398 + 0.52432
fliE Z3027 flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junctionchromosome CDS2712396 315 - 0.536508
fliF Z3028 flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar proteinchromosome CDS2712925 1659 + 0.545509
fliG Z3029 flagellar biosynthesis, component of motor switching and energizing, enabling rotation and determining its directionchromosome CDS2714576 996 + 0.558233
fliH Z3030 flagellar biosynthesis; export of flagellar proteins?chromosome CDS2715543 708 + 0.572034
fliI Z3031 flagellum-specific ATP synthasechromosome CDS2716195 1491 + 0.585513
fliJ Z3032 flagellar fliJ proteinchromosome CDS2717704 444 + 0.529279
fliK Z3033 flagellar hook-length control proteinchromosome CDS2718144 1128 + 0.545213
fliL Z3034 flagellar biosynthesischromosome CDS2719377 465 + 0.533333
fliM Z3035 flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its directionchromosome CDS2719846 1005 + 0.529353
fliN Z3036 flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its directionchromosome CDS2720847 414 + 0.550725
fliO Z3037 flagelar biosynthesischromosome CDS2721323 306 + 0.552288
fliP Z3038 flagellar biosynthesischromosome CDS2721628 738 + 0.533875
fliQ Z3039 flagellar biosynthesischromosome CDS2722375 270 + 0.503704
fliR Z3040 flagellar biosynthesischromosome CDS2722652 786 + 0.477099
fliS Z3015 flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity)chromosome CDS2703036 411 + 0.491484
hofB Z0117 putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptakechromosome CDS120204 1386 - 0.540404
hofC Z0116 putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptakechromosome CDS119012 1203 - 0.522028
hopD Z4693 putative leader peptidasechromosome CDS4255883 468 + 0.478632
htrE Z0150 putative fimbrial usher proteinchromosome CDS157242 2499 - 0.488595
mbhA Z0291 putative motility proteinchromosome CDS287929 786 + 0.52799
motA Z2944 proton conductor component of motor; no effect on switchingchromosome CDS2653391 888 - 0.512387
motB Z2943 enables flagellar motor rotation, linking torque machinery to cell wallchromosome CDS2652468 927 - 0.530744
nfrB Z0699 bacteriophage N4 receptor, outer membrane proteinchromosome CDS661792 2238 - 0.524129
ppdA Z4143 prepilin peptidase dependent protein Achromosome CDS3753405 471 - 0.535032
ppdD Z0118 prelipin peptidase dependent proteinchromosome CDS121599 441 - 0.53288
sfmA Z0686 putative fimbrial-like proteinchromosome CDS650325 576 + 0.439236
sfmC Z0688 putative chaperonechromosome CDS651120 693 + 0.421356
sfmD Z0689 putative outer membrane protein, export functionchromosome CDS651843 2610 + 0.477012
sfmF Z0691 putative fimbrial proteinchromosome CDS655483 516 + 0.496124
spy Z2775 periplasmic protein related to spheroblast formationchromosome CDS2499855 486 - 0.506173
tap Z2939 methyl-accepting chemotaxis protein IV, peptide sensor receptorchromosome CDS2646524 1602 - 0.536829
tar Z2940 methyl-accepting chemotaxis protein II, aspartate sensor receptorchromosome CDS2648171 1662 - 0.523466
trg Z2300 methyl-accepting chemotaxis protein III, ribose sensor receptorchromosome CDS2076859 1641 - 0.511274
tsr Z5955 methyl-accepting chemotaxis protein I, serine sensor receptorchromosome CDS5480000 1665 + 0.539339
yadN Z0152 putative fimbrial proteinchromosome CDS160696 606 - 0.458746
yagX Z0358 putative enzymechromosome CDS339216 2526 - 0.550277
ybgD Z0872 putative fimbriae structural proteinchromosome CDS830531 567 - 0.45679
ybgP Z0869 putative chaperonechromosome CDS827276 732 - 0.525956
ybgQ Z0871 putative outer membrane usher proteinchromosome CDS828310 2163 - 0.507166
ycbF Z1293 putative chaperonechromosome CDS1222615 570 + 0.515789
ycbQ Z1286 putative fimbrial-like proteinchromosome CDS1216554 549 + 0.420765
ycbR Z1287 putative chaperonechromosome CDS1217185 702 + 0.457265
yehB Z3277 putative outer membrane proteinchromosome CDS2934385 2481 - 0.448206
yehC Z3278 putative chaperone proteinchromosome CDS2936881 723 - 0.394191
yehD Z3279 putative fimbrial-like proteinchromosome CDS2937643 543 - 0.38674
yfaL Z3487 putative ATP-binding component of a transport systemchromosome CDS3137469 3753 - 0.513189
yfcS Z3599 putative fimbrial chaperonechromosome CDS3247987 759 - 0.527009
yfjD Z3906 putative transport proteinchromosome CDS3539235 684 + 0.513158
yggR Z4295 putative protein transportchromosome CDS3902918 1026 - 0.546784
yiiO Z5458 chromosome CDS4974541 504 + 0.498016
yjaI Z5578 orf, hypothetical proteinchromosome CDS5078834 567 - 0.516755
yraH Z4498 putative fimbrial-like proteinchromosome CDS4096182 585 + 0.459829
yraI Z4499 putative chaperonechromosome CDS4096846 696 + 0.441092
yraJ Z4500 putative outer membrane proteinchromosome CDS4097570 2517 + 0.474374
yrfC Z4748 orf, hypothetical proteinchromosome CDS4300851 540 - 0.546296