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2024-05-05 13:28:02

Gene list

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COG category: Cell motility
Organism: Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978

Number of genes found: 171

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Pseudomonas syringae pv. phaseolicola 1448A, 1448A; BAA-978
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSPPH_0656 conserved hypothetical proteinchromosome CDS774748 390 + 0.620513
NA PSPPH_5176 methyl-accepting chemotaxis proteinchromosome CDS5873461 2031 - 0.582964
NA PSPPH_2490 methyl-accepting chemotaxis proteinchromosome CDS2875536 1902 + 0.560463
NA PSPPH_4183 conserved hypothetical proteinchromosome CDS4770662 417 + 0.568345
NA PSPPH_A0063 fimbrial chaperone protein, periplasmiclarge plasmid CDS51922 738 + 0.498645
NA PSPPH_0891 methyl-accepting chemotaxis proteinchromosome CDS1062849 1677 - 0.599881
NA PSPPH_3025 methyl-accepting chemotaxis proteinchromosome CDS3511719 1626 - 0.590406
NA PSPPH_4743 methyl-accepting chemotaxis proteinchromosome CDS5384502 1626 + 0.573801
NA PSPPH_3876 protein-glutamate methylesterase WspFchromosome CDS4430453 1011 - 0.614243
NA PSPPH_2010 fimbrial proteinchromosome CDS2361084 1116 - 0.577957
NA PSPPH_0808 methyl-accepting chemotaxis proteinchromosome CDS952122 1215 - 0.606584
NA PSPPH_2274 methyl-accepting chemotaxis proteinchromosome CDS2639719 1929 + 0.580093
NA PSPPH_0940 methyl-accepting chemotaxis proteinchromosome CDS1114943 1923 - 0.578783
NA PSPPH_B0036 conjugal transfer proteinsmall plasmid CDS29425 1032 + 0.580426
NA PSPPH_0076 methyl-accepting chemotaxis proteinchromosome CDS79986 1977 - 0.609004
NA PSPPH_2966 methyl-accepting chemotaxis proteinchromosome CDS3442546 1941 + 0.599691
NA PSPPH_3548 conserved hypothetical proteinchromosome CDS4084264 480 + 0.591667
NA PSPPH_0730 type IV pilus-associated protein, putativechromosome CDS851710 3201 + 0.532334
NA PSPPH_3413 chemotaxis protein CheV, putativechromosome CDS3945912 927 - 0.544768
NA PSPPH_1655 LysM domain proteinchromosome CDS1915582 2832 + 0.605932
NA PSPPH_1200 pili assembly chaperonechromosome CDS1410072 762 + 0.536745
NA PSPPH_0555 motility protein, MotA familychromosome CDS653115 1026 + 0.580897
NA PSPPH_0726 type IV pilin, putativechromosome CDS849523 477 + 0.561845
NA PSPPH_2387 putative S-layer proteinchromosome CDS2768202 342 - 0.55848
NA PSPPH_3415 flagellin synthesis, negative regulator, FlgM, putativechromosome CDS3947837 315 + 0.51746
NA PSPPH_0299 flagellar protein FliL, putativechromosome CDS342706 408 + 0.566176
NA PSPPH_3877 sensor histidine kinase/response regulatorchromosome CDS4431460 2382 - 0.604114
NA PSPPH_3269 methyl-accepting chemotaxis proteinchromosome CDS3788292 1629 + 0.575813
NA PSPPH_0903 methyl-accepting chemotaxis proteinchromosome CDS1075828 1641 + 0.573431
NA PSPPH_0728 conserved hypothetical proteinchromosome CDS850501 708 + 0.526836
NA PSPPH_2950 methyl-accepting chemotaxis proteinchromosome CDS3423619 1986 - 0.602719
NA PSPPH_A0042 methyl-accepting chemotaxis proteinlarge plasmid CDS34374 2031 - 0.573117
NA PSPPH_2534 type III secretion component, putativechromosome CDS2918314 906 + 0.616998
NA PSPPH_0363 methyl-accepting chemotaxis proteinchromosome CDS418128 1917 - 0.595201
NA PSPPH_0571 methyl-accepting chemotaxis proteinchromosome CDS671120 1935 + 0.622739
NA PSPPH_1392 preprotein translocase, SecA subunitchromosome CDS1617991 87 - 0.574713
NA PSPPH_0731 type IV pilus biogenesis proteinchromosome CDS854922 405 + 0.572839
NA PSPPH_3272 methyl-accepting chemotaxis proteinchromosome CDS3791539 1641 - 0.580743
NA PSPPH_B0047 conserved hypothetical proteinsmall plasmid CDS40074 639 + 0.478873
NA PSPPH_4438 type II secretion system protein F domainchromosome CDS5070961 885 + 0.584181
NA PSPPH_3125 methyl-accepting chemotaxis proteinchromosome CDS3626335 1668 - 0.571942
NA PSPPH_1207 chemotaxis protein CheV, putativechromosome CDS1417026 897 - 0.585284
NA PSPPH_2813 conserved hypothetical proteinchromosome CDS3258679 1020 - 0.556863
NA PSPPH_1756 methyl-accepting chemotaxis proteinchromosome CDS2054447 1929 + 0.584759
NA PSPPH_0950 methyl-accepting chemotaxis proteinchromosome CDS1127559 2058 + 0.60447
NA PSPPH_0804 methyl-accepting chemotaxis proteinchromosome CDS947595 1656 - 0.607488
NA PSPPH_3475 methyl-accepting chemotaxis proteinchromosome CDS4015657 1890 + 0.564021
NA PSPPH_0362 methyl-accepting chemotaxis proteinchromosome CDS415982 1944 - 0.593107
NA PSPPH_2524 type III secretion component, putativechromosome CDS2911838 612 + 0.609477
NA PSPPH_5044 methyl-accepting chemotaxis proteinchromosome CDS5715119 1497 + 0.609886
NA PSPPH_4240 methyl-accepting chemotaxis proteinchromosome CDS4836637 1626 + 0.560886
NA PSPPH_1199 fimbrial proteinchromosome CDS1409424 585 + 0.557265
NA PSPPH_5175 methyl-accepting chemotaxis proteinchromosome CDS5871357 1923 - 0.596464
NA PSPPH_2030 methyl-accepting chemotaxis proteinchromosome CDS2383056 1476 - 0.610434
NA PSPPH_0554 motility protein, MotA familychromosome CDS652260 852 + 0.579812
NA PSPPH_A0064 outer-membrane fimbrial usher proteinlarge plasmid CDS52693 2496 + 0.546074
NA PSPPH_2011 outer membrane usher protein fimDchromosome CDS2362247 2517 - 0.603496
NA PSPPH_3414 flagellar basal-body P-ring formation protein FlgA, putativechromosome CDS3946917 759 + 0.577075
NA PSPPH_0237 type IV pilus biogenesis proteinchromosome CDS273184 1785 - 0.60112
NA PSPPH_2831 methyl-accepting chemotaxis proteinchromosome CDS3276947 1680 - 0.572024
NA PSPPH_0483 sensor histidine kinase/response regulatorchromosome CDS545475 5961 + 0.619359
NA PSPPH_2941 methyl-accepting chemotaxis proteinchromosome CDS3411731 1890 - 0.58836
NA PSPPH_0725 type IV pilus biogenesis proteinchromosome CDS848891 501 - 0.566866
NA PSPPH_0657 prophage PSPPH01, putative lipoproteinchromosome CDS775118 339 + 0.631268
NA PSPPH_3404 flagellar basal-body protein, putativechromosome CDS3937866 1761 - 0.590574
NA PSPPH_1727 methyl-accepting chemotaxis proteinchromosome CDS2000767 1632 - 0.588235
NA PSPPH_1201 Outer membrane usher protein fimD precursorchromosome CDS1410952 2556 + 0.592723
NA PSPPH_4957 prophage PSPPH06, tail tape measure protein, TP901 familychromosome CDS5630156 2301 - 0.626249
NA PSPPH_0469 twitching motility proteinchromosome CDS532037 1035 + 0.598068
NA PSPPH_3060 general secretion pathway protein GspIchromosome CDS3554242 372 - 0.599462
NA PSPPH_2361 methyl-accepting chemotaxis proteinchromosome CDS2736947 1629 + 0.597299
NA PSPPH_1520 LysM domain proteinchromosome CDS1767168 2208 + 0.620471
NA PSPPH_2319 twitching motility proteinchromosome CDS2693533 1170 + 0.605983
NA PSPPH_3181 methyl-accepting chemotaxis proteinchromosome CDS3688662 1605 - 0.597508
NA PSPPH_2856 methyl-accepting chemotaxis proteinchromosome CDS3300408 1962 - 0.582569
NA PSPPH_1220 methyl-accepting chemotaxis proteinchromosome CDS1427868 1653 - 0.569873
NA PSPPH_2530 type III secretion component, putativechromosome CDS2915100 1329 + 0.62754
NA PSPPH_2012 chaperone protein PapDchromosome CDS2364800 699 - 0.563662
NA PSPPH_A0080 methyl-accepting chemotaxis proteinlarge plasmid CDS66931 1578 - 0.520279
NA PSPPH_3334 conserved hypothetical proteinchromosome CDS3862553 1593 + 0.577527
NA PSPPH_3217 chemotaxis protein CheV, putativechromosome CDS3729483 927 - 0.567422
NA PSPPH_0821 type IV pilinchromosome CDS982619 396 + 0.520202
NA PSPPH_2946 methyl-accepting chemotaxis proteinchromosome CDS3417815 1797 - 0.570952
NA PSPPH_2947 methyl-accepting chemotaxis proteinchromosome CDS3419777 1614 - 0.584263
NA PSPPH_3476 conserved hypothetical proteinchromosome CDS4017615 1032 - 0.560078
NA PSPPH_2529 type III secretion component, putativechromosome CDS2914511 597 + 0.639866
NA PSPPH_1745 methyl-accepting chemotaxis proteinchromosome CDS2024106 1641 - 0.581353
NA PSPPH_2970 CheW domain proteinchromosome CDS3447260 1455 - 0.616495
NA PSPPH_0729 PilX proteinchromosome CDS851205 522 + 0.54023
NA PSPPH_2986 methyl-accepting chemotaxis proteinchromosome CDS3466173 2193 + 0.597355
NA PSPPH_0484 CheW domain proteinchromosome CDS551428 471 + 0.636943
NA PSPPH_2526 hypothetical proteinchromosome CDS2912783 336 + 0.60119
cheA1 PSPPH_0805 chemotaxis sensor histidine kinase CheAchromosome CDS949281 2103 - 0.60485
cheA2 PSPPH_3360 chemotaxis sensor histidine kinase CheAchromosome CDS3887142 2277 - 0.590689
cheB1 PSPPH_0800 protein-glutamate methylesterase CheBchromosome CDS944617 1077 - 0.593315
cheB2 PSPPH_2603 protein-glutamate methylesterase CheBchromosome CDS3001268 615 + 0.55935
cheB3 PSPPH_3359 protein-glutamate methylesterase CheBchromosome CDS3885928 1164 - 0.609966
cheD PSPPH_0801 chemotaxis protein CheDchromosome CDS945656 534 - 0.574906
cheR1 PSPPH_0802 chemotaxis protein methyltransferase CheRchromosome CDS946186 810 - 0.554321
cheR2 PSPPH_2602 chemotaxis protein methyltransferase CheRchromosome CDS3000450 822 + 0.532847
cheR3 PSPPH_3412 chemotaxis protein methyltransferase CheRchromosome CDS3945033 828 - 0.556763
cheW1 PSPPH_0803 chemotaxis protein CheWchromosome CDS947005 540 - 0.62037
cheW2 PSPPH_3354 chemotaxis protein CheWchromosome CDS3881964 480 - 0.529167
cheZ PSPPH_3361 chemotaxis protein CheZchromosome CDS3889452 768 - 0.550781
fimA PSPPH_2013 type I fimbrial protein FimAchromosome CDS2365654 558 - 0.589606
flaG PSPPH_3391 flagellin FlaGchromosome CDS3919395 399 - 0.52381
flgB PSPPH_3408 flagellar basal-body rod protein FlgBchromosome CDS3942314 408 - 0.561275
flgC PSPPH_3407 flagellar basal-body rod protein FlgCchromosome CDS3941870 441 - 0.566893
flgD PSPPH_3406 flagellar basal-body rod modification protein FlgDchromosome CDS3941168 687 - 0.563319
flgE PSPPH_3405 flagellar hook protein FlgEchromosome CDS3939817 1326 - 0.574661
flgF PSPPH_3402 flagellar basal-body rod protein FlgFchromosome CDS3936650 741 - 0.589744
flgG PSPPH_3401 flagellar basal-body rod protein FlgGchromosome CDS3935815 789 - 0.589354
flgH PSPPH_3400 flagellar L-ring protein FlgHchromosome CDS3935017 714 - 0.585434
flgI PSPPH_3399 flagellar P-ring protein FlgIchromosome CDS3933894 1110 - 0.6
flgJ PSPPH_3398 peptidoglycan hydrolase FlgJchromosome CDS3932639 1245 - 0.607229
flgK PSPPH_3397 flagellar hook-associated protein FlgKchromosome CDS3930567 2061 - 0.591946
flgL PSPPH_3396 flagellar hook-associated protein FlgLchromosome CDS3928961 1593 - 0.583804
flhA PSPPH_3366 flagellar biosynthesis protein FlhAchromosome CDS3893910 2130 - 0.573239
flhB PSPPH_3367 flagellar biosynthetic protein FlhBchromosome CDS3896612 1137 - 0.588391
flhF PSPPH_3365 flagellar biosynthesis protein FlhFchromosome CDS3892570 1329 - 0.613995
fliC PSPPH_3392 flagellin FliCchromosome CDS3919860 849 - 0.56066
fliD PSPPH_3390 flagellar hook-associated protein FliDchromosome CDS3917834 1479 - 0.566599
fliE PSPPH_3384 flagellar hook-basal body complex protein FliEchromosome CDS3912009 330 - 0.557576
fliF PSPPH_3383 flagellar M-ring protein FliFchromosome CDS3910209 1785 - 0.605042
fliG PSPPH_3382 flagellar motor switch protein FliGchromosome CDS3909200 1002 - 0.581836
fliH PSPPH_3381 flagellar assembly protein Flihchromosome CDS3908360 825 - 0.586667
fliI PSPPH_3380 flagellum-specific ATP synthase FliIchromosome CDS3907012 1359 - 0.633554
fliJ PSPPH_3379 flagellar protein FliJchromosome CDS3906556 450 - 0.588889
fliK PSPPH_3375 flagellar hook-length control protein FliKchromosome CDS3902517 1425 - 0.613333
fliL PSPPH_3374 flagellar protein FliLchromosome CDS3901528 501 - 0.570858
fliM PSPPH_3373 flagellar motor switch protein FliMchromosome CDS3900550 969 - 0.594427
fliN PSPPH_3372 flagellar motor switch protein FliNchromosome CDS3900030 459 - 0.581699
fliO PSPPH_3371 flagellar protein FliOchromosome CDS3899589 441 - 0.619048
fliP PSPPH_3370 flagellar biosynthetic protein FliPchromosome CDS3898837 753 - 0.565737
fliQ PSPPH_3369 flagellar biosynthetic protein FliQchromosome CDS3898542 270 - 0.577778
fliR PSPPH_3368 flagellar biosynthetic protein FliRchromosome CDS3897750 777 - 0.566281
fliS PSPPH_3389 flagellar protein FliSchromosome CDS3917310 399 - 0.576441
gspD1 PSPPH_3054 general secretion pathway protein GspDchromosome CDS3548348 2280 - 0.610526
gspD2 PSPPH_2181 general secretion pathway protein GspDchromosome CDS2532946 2337 + 0.604621
gspE1 PSPPH_3064 general secretion pathway protein GspEchromosome CDS3556712 1758 - 0.62116
gspE2 PSPPH_2182 general secretion pathway protein GspEchromosome CDS2535279 1419 + 0.616631
gspF1 PSPPH_3063 general secretion pathway protein GspFchromosome CDS3555513 1203 - 0.620116
gspF2 PSPPH_2183 general secretion pathway protein GspFchromosome CDS2536697 1212 + 0.612211
gspG1 PSPPH_3062 general secretion pathway protein GspGchromosome CDS3555056 432 - 0.606481
gspG2 PSPPH_2177 general secretion pathway protein GspGchromosome CDS2529792 450 + 0.6
gspH1 PSPPH_3061 general secretion pathway protein GspHchromosome CDS3554613 435 - 0.609195
gspH2 PSPPH_2174 general secretion pathway protein GspHchromosome CDS2528224 423 - 0.600473
gspI2 PSPPH_2176 general secretion pathway protein GspIchromosome CDS2529231 393 - 0.590331
hrcC PSPPH_1280 type III outer membrane protein HrcCchromosome CDS1492115 2100 + 0.58
hrcN PSPPH_1290 type III secretion component protein HrcNchromosome CDS1499874 1350 - 0.638519
hrcQb PSPPH_1286 type III secretion component protein HrcQbchromosome CDS1497757 387 - 0.622739
hrpA1 PSPPH_1272 type III helper protein HrpA1chromosome CDS1487609 327 + 0.559633
hrpB PSPPH_1274 type III secretion component protein HrpBchromosome CDS1489054 375 + 0.573333
motA PSPPH_3358 chemotaxis protein MotAchromosome CDS3885188 741 - 0.574899
motB PSPPH_3357 chemotaxis protein MotBchromosome CDS3884294 888 - 0.576577
nfrB PSPPH_1081 bacteriophage N4 adsorption protein Bchromosome CDS1271024 2121 - 0.583687
pilB PSPPH_0820 type IV pilus biogenesis protein PilBchromosome CDS980700 1695 - 0.523894
pilC PSPPH_0819 type IV pilus biogenesis protein PilCchromosome CDS979480 1218 - 0.493432
pilD PSPPH_0818 type IV pilus prepilin peptidase PilDchromosome CDS978606 873 - 0.601375
pilF PSPPH_1318 type IV pilus biogenesis protein PilFchromosome CDS1527006 759 + 0.550725
pilI PSPPH_0481 type IV pilus biogenesis protein PilIchromosome CDS542797 540 + 0.587037
pilJ PSPPH_0482 type IV pilus biogenesis protein PilJchromosome CDS543385 2043 + 0.589819
pilM PSPPH_0390 type IV pilus biogenesis protein PilMchromosome CDS446940 1065 + 0.6
pilN PSPPH_0391 type IV pilus biogenesis protein PilNchromosome CDS448004 600 + 0.575
pilO PSPPH_0392 type IV pilus biogenesis protein PilOchromosome CDS448600 624 + 0.560897
pilP PSPPH_0393 type IV pilus biogenesis protein PilPchromosome CDS449220 528 + 0.592803
pilZ PSPPH_1648 type IV pilus biogenesis protein PilZchromosome CDS1910083 357 + 0.551821
wspA PSPPH_3881 methyl-accepting chemotaxis protein WspAchromosome CDS4436355 1623 - 0.594578
wspB PSPPH_3880 CheW domain protein WspBchromosome CDS4435810 537 - 0.612663
wspC PSPPH_3879 chemotaxis protein methyltransferase WspCchromosome CDS4434527 1287 - 0.613831
wspD PSPPH_3878 CheW domain protein WspDchromosome CDS4433838 690 - 0.613043