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2024-05-05 17:35:54

Gene list

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COG category: Cell motility
Organism: Yersinia pseudotuberculosis IP 32953, IP 32953

Number of genes found: 136

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pseudotuberculosis IP 32953, IP 32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPTB3031 hypotheticalchromosome CDS3579414 570 - 0.461404
NA YPTB0158 putative outer membrane fimbrial usher porinchromosome CDS187253 2652 - 0.470965
NA pYV0067 putative Yops secretion ATP synthasepYV CDS45443 1320 + 0.508333
NA YPTB3055 Prepilin peptidasechromosome CDS3606313 843 - 0.357058
NA YPTB1812 putative phage portal proteinchromosome CDS2158554 2121 + 0.502122
NA YPTB3212 putative outer membrane protein secreting MTB familychromosome CDS3777406 1125 - 0.477333
NA YPTB3377 Putative exported proteinchromosome CDS4010851 834 + 0.300959
NA YPTB2669 putative pili chaperone proteinchromosome CDS3152757 762 - 0.412073
NA YPTB1919 putative outer membrane fimbrial usher porinchromosome CDS2251952 2592 - 0.494985
NA YPTB2371 putative fimbrial proteinchromosome CDS2793979 1164 - 0.462199
NA YPTB0655 putative OmpA-family membrane proteinchromosome CDS777702 1611 + 0.515208
NA pYV0088 yscL; putative type III secretion proteinpYV CDS61087 633 + 0.450237
NA YPTB0236 putative exported proteinchromosome CDS277845 2334 - 0.477721
NA YPTB3362 fimbrial chaperone proteinchromosome CDS3993946 720 - 0.490278
NA YPTB0360 putative fimbrial chaperonechromosome CDS426662 744 + 0.43414
NA YPTB0359 putative outer membrane fimbrial usher proteinchromosome CDS424212 2379 + 0.46322
NA YPTB3896 fimbrial proteinchromosome CDS4651190 558 - 0.460573
NA YPTB1920 probable pili assembly chaperonechromosome CDS2254592 732 - 0.423497
NA YPTB0312 possible type III secretion protein EscC/SpiA, outer membrane porechromosome CDS380872 1572 + 0.43257
NA YPTB3894 putative fimbrial chaperonechromosome CDS4647756 768 - 0.427083
NA YPTB2385 probable outer membrane usher proteinchromosome CDS2811932 2448 + 0.461193
NA YPTB0323 putative type III secretion system ATPase, EscN/SsaN/YscNchromosome CDS389720 1338 + 0.574738
NA YPTB0159 putative fimbrial chaperonechromosome CDS189932 732 - 0.422131
NA pYV0070 yscQ; putative type III secretion proteinpYV CDS48588 924 + 0.481602
NA YPTB3755 conserved hypothetical proteinchromosome CDS4454443 897 - 0.521739
NA YPTB3061 general secretion pathway protein Hchromosome CDS3610749 543 - 0.346225
NA YPTB2667 fimbrial proteinchromosome CDS3149364 609 - 0.433498
NA YPTB0156 putative chaperone proteinchromosome CDS185085 747 - 0.481928
NA YPTB2670 frimbrial proteinchromosome CDS3153675 546 - 0.446886
NA YPTB3322 Putative flagellar hook-length control proteinchromosome CDS3956375 1098 - 0.518215
NA YPTB0160 putative fimbrial proteinchromosome CDS190727 531 - 0.431262
NA YPTB2843 putative fimbrial biogenesis proteinchromosome CDS3358797 750 - 0.489333
NA YPTB3363 outer membrane fimbrial usher porinchromosome CDS3994683 2481 - 0.503829
NA YPTB0326 type III secretion system apparatus protein, SsaQchromosome CDS391854 921 + 0.546145
NA pYV0079 yscC; putative type III secretion proteinpYV CDS55007 1824 + 0.453947
NA YPTB1917 probable pili assembly chaperonechromosome CDS2249850 741 - 0.441296
NA YPTB0763 hypothetical proteinchromosome CDS919414 201 - 0.432836
NA YPTB1819 hypothetical phage proteinchromosome CDS2165504 2136 + 0.492041
NA YPTB2370 putative chaperone proteinchromosome CDS2793179 804 - 0.482587
NA YPTB2668 putative outer membrane fimbrial usher porinchromosome CDS3149957 2712 - 0.456121
NA YPTB2661 possible OmpA/MotB family proteinchromosome CDS3142851 1377 - 0.48366
NA pYV0054 yopD; putative Yop negative regulation/targeting componentpYV CDS36551 921 - 0.431053
NA YPTB2374 putative fimbrial proteinchromosome CDS2798850 543 - 0.425414
NA YPTB1921 fimbrial proteinchromosome CDS2255416 531 - 0.485876
cheA YPTB2405 chemotaxis protein CheAchromosome CDS2839808 2172 - 0.50046
cheB YPTB2398 protein-glutamate methylesterasechromosome CDS2829091 1050 - 0.531429
cheD YPTB3051 Putative methyl-accepting chemotaxis protein.chromosome CDS3602717 1644 - 0.456204
cheD YPTB2401 methyl-accepting chemotaxis proteinchromosome CDS2832980 1674 - 0.479689
cheR YPTB2399 chemotaxis protein methyltransferasechromosome CDS2830140 873 - 0.504009
cheW YPTB2404 chemotaxis protein CheWchromosome CDS2839148 498 - 0.471888
cheZ YPTB2396 chemotaxis protein CheZchromosome CDS2827947 645 - 0.488372
cpxP YPTB0071 putative exported proteinchromosome CDS82113 489 + 0.464213
ecpD YPTB2373 putative chaperone proteinchromosome CDS2797833 780 - 0.441026
flaA YPTB3326 Putative flagellinchromosome CDS3959701 1203 - 0.507066
flgA YPTB3341 Putative flagella basal body P-ring formation proteinchromosome CDS3973294 819 + 0.498168
flgA YPTB1671 flagella basal body P-ring formation protein FlgAchromosome CDS2024781 699 - 0.522175
flgB YPTB3340 putative flagellar basal-body rod proteinchromosome CDS3972760 447 - 0.463087
flgB YPTB1672 flagellar basal-body rod protein FlgBchromosome CDS2025718 414 + 0.5
flgC YPTB1673 flagellar basal-body rod protein FlgCchromosome CDS2026137 405 + 0.540741
flgC YPTB3339 Putative flagellar basal-body rod protein.chromosome CDS3972332 426 - 0.530516
flgD YPTB1674 basal-body rod modification protein FlgDchromosome CDS2026556 687 + 0.526929
flgD YPTB3338 Possible FlgD-like basal-body rod modification protein.chromosome CDS3971673 657 - 0.517504
flgE YPTB1675 flagellar hook protein FlgEchromosome CDS2027444 1287 + 0.51049
flgE YPTB3337 Putative FlgE-like flagellar hook protein.chromosome CDS3970374 1245 - 0.505221
flgF YPTB3336 putative flagellar basal-body rod protein FlgFchromosome CDS3969643 732 - 0.554645
flgF YPTB1676 flagellar basal-body rod protein FlgFchromosome CDS2028752 756 + 0.564815
flgG YPTB1677 flagellar basal-body rod protein FlgG (distal rod protein)chromosome CDS2029533 783 + 0.515964
flgG YPTB3335 putative flagellar basal-body rod proteinchromosome CDS3968790 786 - 0.524173
flgH YPTB1678 flagellar L-ring protein precursorchromosome CDS2030459 690 + 0.521739
flgH YPTB3334 putative flagellar L-ring proteinchromosome CDS3968090 666 - 0.527027
flgI YPTB1679 flagellar P-ring protein precursorchromosome CDS2031163 1110 + 0.545946
flgI YPTB3333 Putative flagellar P-ring proteinchromosome CDS3966901 1176 - 0.543367
flgJ YPTB3332 Putative flagellar proteinchromosome CDS3966598 294 - 0.496599
flgJ YPTB1680 flagellar protein FlgJchromosome CDS2032272 945 + 0.540741
flgK YPTB3331 putative flagellar hook-associated proteinchromosome CDS3965124 1362 - 0.457416
flgK YPTB1681 flagellar hook-associated protein 1chromosome CDS2033944 1665 + 0.5003
flgL YPTB1682 flagellar hook-associated protein 3chromosome CDS2035747 981 + 0.479103
flgL YPTB3330 putative flagellar hook-associated proteinchromosome CDS3964172 924 - 0.404762
flgM YPTB1670 negative regulator of flagellin synthesischromosome CDS2024328 303 - 0.475248
flgN YPTB1669 flagella synthesis protein FlgNchromosome CDS2023869 441 - 0.485261
flhA YPTB3357 Putative flagellar biosynthesis/export membrane protein flhA, fhiA.chromosome CDS3986716 2097 + 0.450167
flhA YPTB1666 flagellar biosynthesis/export protein FlhAchromosome CDS2017622 2079 + 0.519
flhB YPTB3356 Putative flagellar assembly/export protein, flhB.chromosome CDS3985596 1134 + 0.447972
flhB YPTB1665 flagellar biosynthetic/export protein FlhBchromosome CDS2016462 1161 + 0.521102
fliC YPTB1714 thermoregulated motility proteinchromosome CDS2068249 1110 + 0.465766
fliD YPTB1713 flagellar hook-associated protein 2chromosome CDS2066552 1401 - 0.463954
fliD YPTB3325 putative flagellar hook-associated proteinchromosome CDS3958195 1287 - 0.439782
fliE YPTB1704 flagellar hook-basal body complex protein FliEchromosome CDS2058868 312 + 0.49359
fliE YPTB3349 possible flagellar hook-basal body complex proteinchromosome CDS3980522 381 - 0.51706
fliF YPTB3348 putative flagellar M-ring proteinchromosome CDS3978872 1641 - 0.502742
fliF YPTB1703 flagellar M-ring proteinchromosome CDS2056803 1713 - 0.534151
fliG YPTB3347 puative flagellar motor switch proteinchromosome CDS3977857 1044 - 0.505747
fliG YPTB1702 flagellar motor switch protein FliGchromosome CDS2055814 993 - 0.520644
fliH YPTB3346 Putative flagellar assembly/export proteinchromosome CDS3977136 717 - 0.542538
fliH YPTB1701 flagellar assembly protein FliHchromosome CDS2055105 717 - 0.546722
fliI YPTB1700 flagellum-specific ATP synthasechromosome CDS2053705 1401 - 0.552463
fliI YPTB3345 Putative flagellum export-specific ATPasechromosome CDS3975803 1341 - 0.57569
fliJ YPTB1699 flagellar protein FliJchromosome CDS2053183 447 - 0.478747
fliK YPTB1698 flagellar hook-length control protein FliKchromosome CDS2051834 1353 - 0.553585
fliL YPTB1697 flagellar protein FliLchromosome CDS2051078 471 - 0.47983
fliM YPTB1696 flagellar motor switch protein FliMchromosome CDS2050071 1002 - 0.503992
fliN YPTB1695 flagellar motor switch protein FliNchromosome CDS2049658 417 - 0.496403
fliN YPTB3352 Flagellar switch proteinchromosome CDS3983362 414 + 0.444444
fliO YPTB1694 possible flagellar protein FliOchromosome CDS2049062 369 - 0.563686
fliP YPTB1693 flagellar biosynthetic protein FliPchromosome CDS2048241 825 - 0.513939
fliP YPTB3353 Putative flagellar assembly/export protein, fliPchromosome CDS3983772 771 + 0.516213
fliQ YPTB1692 flagellar biosynthetic protein FliQchromosome CDS2047866 270 - 0.518519
fliQ YPTB3354 Putative flagellar assembly/export protein, fliQchromosome CDS3984544 273 + 0.450549
fliR YPTB1691 flagellar biosynthetic protein FliRchromosome CDS2047081 783 - 0.496807
fliR YPTB3355 Putative flagellar assembly/export protein, fliRchromosome CDS3984823 774 + 0.47416
fliS YPTB1712 flagellar protein FliSchromosome CDS2066143 399 - 0.471178
fliS YPTB3324 Putative flagellar proteinchromosome CDS3957802 384 - 0.388021
gspD YPTB3065 general secretion pathway protein Dchromosome CDS3614450 1923 - 0.334373
gspE YPTB3064 general secretion pathway protein Echromosome CDS3612942 1512 - 0.39418
gspF YPTB3063 Putative general secretion pathway protein F.chromosome CDS3611753 1203 - 0.339152
gspG YPTB3062 general secretion pathway protein Gchromosome CDS3611296 438 - 0.394977
gspI YPTB3060 General secretion pathway protein Ichromosome CDS3610367 345 - 0.330435
hofB YPTB0706 putative outer membrane protein export (MTB) sytem, hofB subunitchromosome CDS845082 1539 - 0.461339
hofC YPTB0705 putative outer membrane protein export (MTB) sytem, hofC subunitchromosome CDS843886 1200 - 0.456667
htrE YPTB2372 putative outer membrane fimbrial usher porinchromosome CDS2795139 2613 - 0.493685
motA YPTB2407 chemotaxis MotA proteinchromosome CDS2843306 888 - 0.488739
motA YPTB3319 putative flagellar motor transmembrane channel proteinchromosome CDS3954296 867 - 0.468281
motB YPTB2406 chemotaxis MotB proteinchromosome CDS2841990 1320 - 0.491667
motB YPTB3318 Putative chemotaxis membrane proteinchromosome CDS3953385 795 - 0.451572
ppdD YPTB0707 putative major component of type IV pilin, prelipin peptidase dependent proteinchromosome CDS846613 465 - 0.447312
psaB YPTB1335 chaperone protein PsaB precursorchromosome CDS1589475 822 + 0.377129
psaC YPTB1336 outer membrane usher protein PsaC precursorchromosome CDS1590380 2472 + 0.497168
smfA YPTB3364 Putative mannose-resistant Proteus-like fimbrial proteinchromosome CDS3997470 531 - 0.474576
smfA YPTB2624 putative mannose-resistant/Proteus-like fimbrial proteinchromosome CDS3100626 531 - 0.46516
tap YPTB2400 methyl-accepting chemotaxis protein IV (MCP-IV) (dipeptide ch...chromosome CDS2831185 1611 - 0.506518
tar YPTB3924 methyl-accepting chemotaxis protein IIchromosome CDS4683710 1950 - 0.490256
trg YPTB2412 methyl-accepting chemotaxis protein III (MCP-III) (ribose and...chromosome CDS2851452 1740 + 0.482184
triJ pYptb0015 TriJ proteinpYptb32953 CDS12262 1014 + 0.475345
tsr2 YPTB1265 putative methyl-accepting chemotaxis proteinchromosome CDS1515468 1788 - 0.503915
yapA YPTB2848 putative pertactin family virulence factor/autotransporterchromosome CDS3365050 4350 + 0.50092
yqiG YPTB3895 outer membrane fimbrial usher porinchromosome CDS4648616 2499 - 0.458183