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2024-05-08 23:50:57

Gene list

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COG category: Cell motility
Organism: Vibrio cholerae O1 biovar eltor str. N16961, N16961

Number of genes found: 130

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Vibrio cholerae O1 biovar eltor str. N16961, N16961
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VC0097 flagellar protein FliL, putativechromosome I CDS95062 411 + 0.457421
VC0216 methyl-accepting chemotaxis proteinchromosome I CDS223454 1695 + 0.504425
VC0282 methyl-accepting chemotaxis proteinchromosome I CDS289352 1671 - 0.513465
VC0377 conserved hypothetical proteinchromosome I CDS393036 462 - 0.474026
VC0400 MSHA biogenesis protein MshJchromosome I CDS426732 651 + 0.483871
VC0405 MSHA biogenesis protein MshEchromosome I CDS431374 1728 + 0.500579
VC0406 MSHA biogenesis protein MshGchromosome I CDS433110 1224 + 0.489379
VC0409 MSHA pilin protein MshAchromosome I CDS435449 537 + 0.430168
VC0449 methyl-accepting chemotaxis proteinchromosome I CDS479294 1626 - 0.50369
VC0462 twitching motility protein PilTchromosome I CDS491296 1038 + 0.487476
VC0463 twitching motility protein PilTchromosome I CDS492348 1107 + 0.507678
VC0514 methyl-accepting chemotaxis proteinchromosome I CDS545174 1881 + 0.352472
VC0825 toxin co-regulated pilus biosynthesis protein Ichromosome I CDS886543 1863 - 0.381106
VC0828 toxin co-regulated pilinchromosome I CDS890449 675 + 0.432593
VC0835 toxin co-regulated pilus biosynthesis protein Tchromosome I CDS896155 1512 + 0.361772
VC0836 toxin co-regulated pilus biosynthesis protein Echromosome I CDS897641 1023 + 0.355816
VC0839 leader peptidase TcpJchromosome I CDS900726 762 + 0.314961
VC0840 accessory colonization factor AcfBchromosome I CDS901494 1881 + 0.342903
VC0857 fimbrial assembly protein PilE, putativechromosome I CDS923726 444 - 0.439189
VC0858 type IV pilin, putativechromosome I CDS924224 555 + 0.427027
VC0861 type IV pilin, putativechromosome I CDS926571 414 + 0.451691
VC0892 chemotaxis protein PomAchromosome I CDS950906 765 + 0.494118
VC0893 chemotaxis protein PomBchromosome I CDS951682 957 + 0.502612
VC1083 hypothetical proteinchromosome I CDS1149395 585 + 0.442735
VC1248 methyl-accepting chemotaxis proteinchromosome I CDS1319246 1611 - 0.504035
VC1289 methyl-accepting chemotaxis proteinchromosome I CDS1366600 1896 + 0.488397
VC1298 methyl-accepting chemotaxis proteinchromosome I CDS1377542 1632 - 0.462623
VC1313 methyl-accepting chemotaxis proteinchromosome I CDS1395061 1632 - 0.48652
VC1394 methyl-accepting chemotaxis proteinchromosome I CDS1485193 1236 - 0.427184
VC1397 chemotaxis protein CheAchromosome I CDS1487058 2286 - 0.460192
VC1399 chemotaxis protein methyltransferase CheRchromosome I CDS1489689 867 - 0.407151
VC1401 protein-glutamate methylesterase CheBchromosome I CDS1491209 1077 - 0.487465
VC1402 purine-binding chemotaxis protein Chew, putativechromosome I CDS1492306 1563 - 0.444658
VC1403 methyl-accepting chemotaxis proteinchromosome I CDS1493881 1926 - 0.448079
VC1405 methyl-accepting chemotaxis proteinchromosome I CDS1496302 1788 + 0.447987
VC1413 methyl-accepting chemotaxis proteinchromosome I CDS1505902 1737 - 0.447323
VC1535 methyl-accepting chemotaxis proteinchromosome I CDS1647373 1593 - 0.487131
VC1602 chemotaxis protein CheVchromosome I CDS1715544 987 - 0.451874
VC1612 fimbrial biogenesis and twitching motility protein, putativechromosome I CDS1726820 714 + 0.459384
VC1643 methyl-accepting chemotaxis proteinchromosome I CDS1768345 1791 + 0.47292
VC1763 chemotaxis protein MotB-related proteinchromosome I CDS1902898 735 - 0.401361
VC1764 hypothetical proteinchromosome I CDS1903625 2121 - 0.413013
VC1859 methyl-accepting chemotaxis proteinchromosome I CDS1997948 2121 - 0.477133
VC1868 methyl-accepting chemotaxis proteinchromosome I CDS2010412 1881 - 0.472621
VC1898 methyl-accepting chemotaxis proteinchromosome I CDS2044494 2019 + 0.485389
VC1967 methyl-accepting chemotaxis proteinchromosome I CDS2117923 2055 + 0.438443
VC2006 chemotaxis protein CheVchromosome I CDS2158278 945 - 0.431746
VC2059 purine-binding chemotaxis protein CheWchromosome I CDS2214137 525 - 0.459048
VC2062 protein-glutamate methylesterase CheBchromosome I CDS2216465 1134 - 0.4903
VC2063 chemotaxis protein CheAchromosome I CDS2217625 2358 - 0.48855
VC2064 chemotaxis protein CheZchromosome I CDS2219992 720 - 0.452778
VC2068 flagellar biosynthetic protein FlhF, putativechromosome I CDS2222809 1488 - 0.502688
VC2069 flagellar biosynthetic protein FlhAchromosome I CDS2224331 2094 - 0.499522
VC2120 flagellar biosynthetic protein FlhBchromosome I CDS2275104 1131 - 0.504863
VC2121 flagellar biosynthetic protein FliRchromosome I CDS2276244 783 - 0.498084
VC2122 flagellar biosynthetic protein FliQchromosome I CDS2277035 270 - 0.451852
VC2123 flagellar biosynthetic protein FliPchromosome I CDS2277317 900 - 0.478889
VC2124 flagellar protein FliOchromosome I CDS2278194 390 - 0.505128
VC2125 flagellar motor switch protein FliNchromosome I CDS2278587 417 - 0.505995
VC2126 flagellar motor switch protein FliMchromosome I CDS2279068 1050 - 0.490476
VC2127 flagellar protein FliL, putativechromosome I CDS2280125 504 - 0.513889
VC2128 flagellar hook-length control protein FliK, putativechromosome I CDS2280663 2025 - 0.53037
VC2129 flagellar protein FliJ, putativechromosome I CDS2282851 495 - 0.460606
VC2130 flagellum-specific ATP synthase FliIchromosome I CDS2283309 1320 - 0.52803
VC2131 flagellar assembly protein FliH, putativechromosome I CDS2284632 813 - 0.522755
VC2132 flagellar motor switch protein FliGchromosome I CDS2285525 1047 - 0.490926
VC2133 flagellar M-ring protein FliFchromosome I CDS2286564 1743 - 0.503729
VC2134 flagellar hook-basal body complex protein FliEchromosome I CDS2288322 330 - 0.454545
VC2138 flagellar protein FliSchromosome I CDS2293010 411 - 0.462287
VC2140 flagellar hook-associated protein FliDchromosome I CDS2293738 2001 - 0.515242
VC2142 flagellin FlaBchromosome I CDS2296295 1131 - 0.503979
VC2143 flagellin FlaDchromosome I CDS2297661 1134 - 0.486772
VC2144 flagellin FlaEchromosome I CDS2299084 1137 - 0.495163
VC2161 methyl-accepting chemotaxis proteinchromosome I CDS2308741 1872 - 0.482372
VC2187 flagellin FlaCchromosome I CDS2332968 1134 - 0.483245
VC2188 flagellin core protein Achromosome I CDS2334656 1140 - 0.487719
VC2190 flagellar hook-associated protein FlgLchromosome I CDS2336203 1194 - 0.474037
VC2191 flagellar hook-associated protein FlgMchromosome I CDS2337409 1875 - 0.479467
VC2192 flagellar protein FlgJchromosome I CDS2339463 939 - 0.487753
VC2193 flagellar P-ring protein FlgIchromosome I CDS2340412 1086 - 0.504604
VC2194 flagellar L-ring protein FlgHchromosome I CDS2341588 786 - 0.491094
VC2195 flagellar basal-body rod protein FlgGchromosome I CDS2342388 789 - 0.489227
VC2196 flagellar basal-body rod protein FlgFchromosome I CDS2343196 750 - 0.516
VC2197 flagellar hook protein FlgEchromosome I CDS2344128 1305 - 0.47433
VC2198 basal-body rod modification protein FlgDchromosome I CDS2345461 708 - 0.481638
VC2199 flagellar basal-body rod protein FlgCchromosome I CDS2346186 417 - 0.46283
VC2200 flagellar basal-body rod protein FlgBchromosome I CDS2346607 396 - 0.489899
VC2201 chemotaxis protein methyltransferase CheRchromosome I CDS2347222 828 - 0.463768
VC2202 chemotaxis protein CheVchromosome I CDS2348060 927 - 0.440129
VC2203 flagellar protein, putativechromosome I CDS2349043 768 + 0.457031
VC2204 negative regulator of flagellin synthesis FlgM, putativechromosome I CDS2349941 324 + 0.490741
VC2205 hypothetical proteinchromosome I CDS2350362 432 + 0.449074
VC2423 fimbrial proteinchromosome I CDS2597151 504 + 0.39881
VC2424 type IV pilus assembly protein PilBchromosome I CDS2597654 1689 + 0.528123
VC2425 type IV pilin biogenesis protein PilCchromosome I CDS2599385 1227 + 0.490628
VC2426 leader peptidase PilDchromosome I CDS2600669 876 + 0.515982
VC2439 methyl-accepting chemotaxis proteinchromosome I CDS2616435 1302 - 0.500768
VC2631 fimbrial assembly protein PilP, putativechromosome I CDS2802910 519 - 0.491329
VC2632 fimbrial assembly protein PilO, putativechromosome I CDS2803418 600 - 0.495
VC2633 fimbrial assembly protein PilN, putativechromosome I CDS2804001 591 - 0.472081
VC2634 fimbrial assembly protein PilM, putativechromosome I CDS2804575 1017 - 0.471976
VC2691 periplasmic protein cpxP, putativechromosome I CDS2859114 504 - 0.513889
VC2728 general secretion pathway protein Ichromosome I CDS2901006 354 - 0.522599
VC2729 general secretion pathway protein Hchromosome I CDS2901349 585 - 0.511111
VC2730 general secretion pathway protein Gchromosome I CDS2901967 441 - 0.478458
VC2731 general secretion pathway protein Fchromosome I CDS2902448 1221 - 0.532351
VC2732 general secretion pathway protein Echromosome I CDS2903668 1512 - 0.525794
VCA0008 methyl-accepting chemotaxis proteinchromosome II CDS6624 1662 - 0.483755
VCA0031 methyl-accepting chemotaxis proteinchromosome II CDS37648 1566 - 0.4553
VCA0068 methyl-accepting chemotaxis proteinchromosome II CDS77459 1644 - 0.484793
VCA0176 methyl-accepting chemotaxis proteinchromosome II CDS192834 1935 + 0.486305
VCA0220 hemolysin secretion protein HylBchromosome II CDS240114 1647 + 0.485732
VCA0268 methyl-accepting chemotaxis proteinchromosome II CDS285034 1932 + 0.47412
VCA0663 methyl-accepting chemotaxis proteinchromosome II CDS598557 1764 + 0.461451
VCA0773 methyl-accepting chemotaxis proteinchromosome II CDS715286 1422 + 0.506329
VCA0906 methyl-accepting chemotaxis proteinchromosome II CDS860947 1737 - 0.464594
VCA0923 methyl-accepting chemotaxis proteinchromosome II CDS874442 1959 + 0.475242
VCA0954 chemotaxis protein CheV, putativechromosome II CDS903131 921 + 0.465798
VCA0974 methyl-accepting chemotaxis proteinchromosome II CDS919898 1686 - 0.488138
VCA0979 methyl-accepting chemotaxis proteinchromosome II CDS927422 885 - 0.474576
VCA1034 methyl-accepting chemotaxis proteinchromosome II CDS984002 2001 - 0.501249
VCA1056 methyl-accepting chemotaxis proteinchromosome II CDS1005434 2313 - 0.479032
VCA1069 methyl-accepting chemotaxis proteinchromosome II CDS1018626 1920 - 0.510417
VCA1088 methyl-accepting chemotaxis proteinchromosome II CDS1043516 1155 - 0.45368
VCA1090 chemotaxis protein CheD, putativechromosome II CDS1045749 702 - 0.452991
VCA1091 chemotaxis protein methyltransferase CheRchromosome II CDS1046389 831 - 0.441637
VCA1092 methyl-accepting chemotaxis proteinchromosome II CDS1047234 2037 - 0.487972
VCA1093 purine-binding chemotaxis protein CheWchromosome II CDS1049284 462 - 0.495671
VCA1094 purine-binding chemotaxis protein CheWchromosome II CDS1049742 528 - 0.486742
VCA1095 chemotaxis protein CheAchromosome II CDS1050278 2163 - 0.490522