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# Helicobacter pylori 26695, 26695

>gid:23  HP0019  chemotaxis protein (cheV)
MADSLAGIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGN
LTIISHENNSLVEGLIIIRELTIPLIDMKKWFYYDSQNKNKDLRPYRIEK
EKGEDDIVMICEFSRWTIGVRIYEADRILSKKWTEMEQSAGLGGSAGNNK
LVSRTRYFDGRLVQVVDIEKMLIDVFPWIEDEKHNDLETLSKIHSNQCVL
LADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPTTDVSNIGLII
TDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADD
FISKSNPKDIQRVVKQFLELA
>gid:41  HP0037  NADH-ubiquinone oxidoreductase subunit
MKNDAYEIILSWFITPLTAILGRFAEFFLYTLHAQLVFNSVVALAFMLFA
YRSLKEQNFFSASALTEALLFVGFFALFNYALKNPMHFYEFFQNAIFIAP
NMIAQSLSQSLSNFSDHALSLDFIFNHGFYALSFISDLSHNEMSVWLFLS
VLQGLFLSVLFAIIILVYLEVHVWCSLGVLFLAFGFFKTWRSVVVICLKK
CFALGFYKPFLLLVGFLNVSVTKALIDAHMQEKQDLSLLLVVALFLCCVF
IIGVPFFINALFRVQNSLKETYKLATNLSANLSQNALNSLQYITTPPASS
SVSSSMSESVSKEKETHSPTFKVETTQLDVKIPNFKQKKVKKDTINTKNE
I
>gid:44  HP0040  H. pylori predicted coding region HP0040
MATLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVI
DNEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYSNAFLKPQKENMAENA
PKDAPTNNKPLKEEKEETKEKEEETITIGDNTNAMKIVKKDIQKGYKALK
SSQRKWYCLGICSKKSKLSLMPKEIFNDKQFTYFKFDKRLALSKFPVIYK
VVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKDYLCIRFVKKAKDE
>gid:45  HP0041  H. pylori predicted coding region HP0041
MNKWLKGAIVFVGGFATIITISLIYHQKPKAPLNNQPSLLNDDEVKYPLQ
DYTFTQNPQPTNTESSKDATIKALQEQLKAALKALNSKEMNHSKEETFKN
PPIDLKQTQTPLKKTFLQSNGIY
>gid:86  HP0082  methyl-accepting chemotaxis transducer (tlpC)
MKSTRIGSKIVMMVCAVVIVISAVMGVIISYKVESVLQSQATELLQKKAQ
LVSFKIQGIMKRIFMGANTLEKFLSDENSAINDTLKRRMLSEFLLANPHV
LLVSAIYTNNNERVITAMSMDSKIAYPNTTLNENMTNQIRSLKSITHSDP
YYKEVNGDKIYGMDITLPLMGKNQNAIGALNFFLNIDAFYTDVVGKKKSN
TFLMGKDGRLLINPNREIQDKILSAINPDRRVAKAVEYYNQNEAGTLSYH
SLSGNTETFLAIQPFDFFEEKGNNGNHWRWAIGKYVNKSLVFKEATNTKF
IIITTLILGVLVLAFLVFIIVSNLITKRISRVNNTLNDFFNLLNNPKNNH
AISLTPPSAYDEIGQMQASINENILKTQESIQADNKAIQNSIEVTNYVEN
GDFTQEIACVPKNKDLQALRNTINSIIQYFRNQIGANIESLNNALEHYKN
LDFTHHIQNPKANMEKALNTLGQEISSMLKASLGFANALNHESKDLKTCV
DNLTKTAHKQERSLKNTTQSLEEITNIITTIDSKSQEMISQGEDIKSVVD
MIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSE
IEANINILVQSIADNAESIKMQNKGVENIHNSINALQQDVQDNLTIANHS
LQVSTKIDGISQDILEDVSRKKF
>gid:104  HP0099  methyl-accepting chemotaxis protein (tlpA)
MSKGLSIGNKIILCVALIVIVCVSILGVSLNSRVKEILKESALHSMQDSL
HFKVNEVQGVLENTYTSMGIVKEMLPKDTKREIKIGLLKNFILANSHVAG
VSMFFKGREDLRLTLLRDNNTIKLVENPSLENSPLAQKAMKNKEISKSLG
YYRKMPNGAEVYGVDILLPLLNENAQEVVGALMIFISIDSFSNEITKNRS
DLFLIGTKGKVLLSANKSLQDKPIAEIYKSVPKATNEVMAILENGSKATL
EYLDPFSHKENFLAVETFKMLGKTESKDNLNWMIALIIEKDKVYEQVGSV
RFVVIIASAIMVLALIIAITLLMRAIVSSRLEAVSSTLSHFFKLLNNQAN
SSGIKLIEAKSNDELGRMQTAINKNILQTQKIMQEDRQAVQDTIKVVSDV
KAGNFAVRITAEPASPDLKELRDALNGIMDYLQESVGTHMPSIFKIFESY
SGLDFRGRIQNASGRVELVTNALGQEIQKMLETSSNFAKDLANDSANLKE
CVQNLEKASNSQHKSLMETSKTIENITTSIQGVSSQSEAMIEQGQDIKSI
VEIIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSL
SEIEANINILVQSISDTSESIKNQVKEVEEINASIEALRSVTEGNLKIAS
DSLEISQEIDKVSNDILEDVNKKQF
>gid:108  HP0103  methyl-accepting chemotaxis protein (tlpB)
MMFSSMFASLGTRIMLVVLAALLGLGGLFIGFVKVMQKDVLAQLMEHLET
GQYKKREKTLAYMTKIIEQGIHEYYKNFDNATARKMALDYFKRINDDKGM
IYMVVVDKNGVVLFDPVNPKTVGQSGLDAQSVDGVYYVRGYLEAAKKGGG
YTYYKMPKYDGGVPEKKFAYSHYDEVSQMVIATTSYYTDINTENKAIKEG
VNKVFDENTTKLFLWILTATIALVVLTLIYAKLRIVKRIDELVLKINAFS
RGDKDLRAKIDVGDRNDEISQVGRGINLFVENARLIMEEIKGISTLNKTS
MDKLVQITQETQKSMKDSSTTLNSVKNKATDIASMMNASIEQSQGLRKRL
IETQGLVKESKDAIGDLFSQITESAHTEEELSSKVEQLSRNADDVKSILD
IINDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRNLAGRTQKSLAE
INSTIMVIVQEINAVSSQMNLNSQKMERLSDMSKSVQETYEKMSSNLSSV
VSDSNQSMDDYAKSGHQIEVMVSDFAEVEKVASKTLADSSDILNIATHVS
GTTMNLDKQVNLFKT
>gid:120  HP0115  flagellin B (flaB)
MSFRINTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAI
ADSLRSQSANLGQAIRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAA
QDGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQMLSGSFSNKEFQIG
AYSNATVKASIGSTSSDKIGHVRMETSSFSGAGMLASAAAQNLTEVGLNF
KQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASYNVMATG
GTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEAS
LDIQGRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTL
TRTDARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGA
NANGAQAETNSQGIGAGVTSLKGAMIVMDMADSARTQLDKIRSDMGSVQM
ELVTTINNISVTQVNVKAAESQIRDVDFAEESANFSKYNILAQSGSFAMA
QANAVQQNVLRLLQ
>gid:162  HP0158  H. pylori predicted coding region HP0158
MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNKQIRKMHAE
IKMAKNFFVLDAKGMLILKPSQLKEQGHKEGILEHDLTEGIELESHASFS
DKYYFYQAVSEKRCILTDPYPSKKGNHLVVSASYPVYDQNNDLAFVVCLQ
IPLRVAIEISSPSKYFRTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFW
TAIVNFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVLGKNSGDNHHA
IHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAVGVAVLLI
SLAIYVKFAYSVLPKRER
>gid:174  HP0170  H. pylori predicted coding region HP0170
MTQEELDALMNGGDLENLEALETKEETKEEAKEEAKEEAKEEAKEKEEIK
EESSSQKMTVKKEDAEKYGKISPNEWPPPPPTEEHKVVHQLDDVTRDSEV
KATQIFDQLDLIGASAEKIAKMVKKIQEPLQKHQEIFDNLHGHFPHVESF
KTALNEQQEILNALKSIEEEAANCSDSSMQAMDIMQFQDIHRQKIERVVN
VMRALSQYMNSLFEGKIDDSKRVSSATFITGDDDKDLASADDIEALIASF
GAK
>gid:177  HP0173  flagellar biosynthetic protein (fliR)
MLDFIQELSTPHVRDFFLLFLRVSGVLSFFPFFENHLVPLSVRGALSLYV
SAIFYPTLEFSNAAYTPEGFIIACLCELFLGVCASVFLQIVFASLVFATD
SISFSMGLTMASAYDPISGSQKPIVGQALLLLAILILLDLSFHHQIILFV
DHSLKAVPLGQFVFEPALAKNIVKAFSHLFVIGFSMAFPILCLVLLSDII
FGMIMKTHPQFNLLAIGFPVKIAIGFVGIILIASAIMGRFKEEISLAFSA
ISKIF
>gid:230  HP0227  outer membrane protein (omp5)
MKKSLLLSLSLIASLSRAEDDGFYTSVGYQIGEAVQQVKNTGALQNLADR
YDNLNNLLNQYNYLNSLVNLASTPSAITGAIDNLSSSAINLTSATTTSPA
YQAVALALNAAVGMWQVIALFIGCGPGPTNNQSYQSFGNTPALNGTTTTC
NQAYGTGPNGILSIDEYQKLNQAYQIIQTALNQNQGGGMPALNDTTKTGV
VNIQQTNYRTTTQNNIIEHYYTENGKEIPVSYSGGSSFSPTIQLTYHNNA
ENLLQQAATIMQVLITQKPHVQTSNGGKAWGLSSTPGNVMDIFGPSFNAI
NEMIKNAQTALAKTQQLNANENAQITQPNNFNPYTSKDKGFAQEMLNRAE
AQAEILNLAKQVANNFHSIQGPIQGDLEECKAGSAGVITNNTWGSGCAFV
KETLNSLEQHTAYYGNQVNQDRALAQTILNFKEALNTLNKDSKAINSGIS
NLPNAKSLQNMTHATQNPNSPEGLLTYSLDSSKYNQLQTIAQELGKNPFR
RFGVIDFQNNNGAMNGIGVQVGYKQFFGKKRNWGLRYYGFFDYNHAYIKS
NFFNSASDVWTYGVGMDALYNFINDKNTNFLGKNNKLSVGLFGGFALAGT
SWLNSQQVNLTMMNGIYNANVSTSNFQFLFDLGLRMNLARPKKKDSDHAA
QHGIELGFKIPTINTNYYSFMGAKLEYRRMYSLFLNYVFAY
>gid:250  HP0246  flagellar basal-body P-ring protein (flgI)
MKRVFLWLIFVLAFHKLLAEKIGDIASVVGVRDNQLIGYGLVIGLNGTGD
KSGSKFTMQSISNMLESVNVKISADDIKSKNVAAVMITASLPPFARQGDK
IDIHISSIGDAKSIQGGTLVMTPLNAVDGNIYALAQGAIVSGNSNNLLSA
NIINGATIEREVSYDLFHKNAMTLSLKNPNFKNAIQVQNTLNKVFGNKVA
IALDPKTIQITRPERFSMVEFLALVQEIPINYSAKNKIIVDEKSGTIVSG
VDIMVHPVVVTSQDITLKITKDPLNDSKNTQDLDNNMSLDTAHNTLSSNG
KNITIAGVVKALQKIGVSAKGMVSILQALKKSGAISAEMEIL
>gid:294  HP0289  toxin-like outer membrane protein
MKKFKKKPKSIKRSHQNQKTILKRPLWLMPLLISGFASGVYANNLWDLLN
PKVGGEYVHWVKGSQYCAWWEFAGCLKNVWGANHKGYDAGNAANYLSSQN
YQAISVGSGNETGTYSLSGFTNYVGGNLTINLGNSVVLDLSGSNSFTSYQ
GYNQGKDDVTFTVGAINLNGTLEVGNRVGSGAGTHTGTATLNLNANKVNI
NSNINAYKTSQVNIGNANSVITIGSVSLSGDVCSSLASVGIGANCSTSGP
SYSFKGTTNATNTAFSNASGSFTFEENATFSGAKWNGGTYTFNKEFSATN
NTAFSSGSFNFKGVSSFNGTSFSNASYTFDNQATFQNSSFNGGTFTFNNQ
TNPTNNAQHPQIQNSSFSGNATTLKGFVNFQQAFNNSNHQLTIQNASFNN
ATFNNTGKITIEKDASFNNTTFNTSVDTNNMSVTGGVTLSGKNDLKNGST
LDFGSSKITLAQGTTFNLTSLGSEKSVTILNSSGGITYSNLLNHAINGLT
SALKTNESLSNPQSFAQGLWDIITYNGVTGQLLNENAATSKPTDSSPSKS
STNSTQVYQVGYKIGDTIYKLQETFSHNSIIIQALESGTYTPPPVINGSK
FDLSASNYINADMPWYDHKYYIPKSQNFTESGTYYLPSVQIWGSYTNSFK
QTFSANGSNLVIGYNSTWTDHNVSSSGTVSFGDTSGSALNGHCGPWPYYQ
CTGTTNGTYSAYHVYITANLRSGNRIGTGGAANLIFNGVDSINIANATIT
QHNAGIYSSSMTFSTQSMDNSQNLNGLNSNGKLSVYGTTFTNEAKDGKFI
FNAGQAVFENTNFNGGSYQFSGDSLNFSNNNQFNSGSFEISAKNASFNNA
NFNNSASFNFNNSNATTSFVGDFTNANSNLQIAGNAVFGNSTNGSQNTAN
FNNTGSVNISGNATFDNVVFNGPTNTSVKGQVTLNNITLKNLNAPLSFGD
GTITFNAHSVINIAESITNGNPITLVSSSKEIEYNNAFSKNLWQLINYQG
HGASSEKLVSSAGNGVYDVVYSFNNQTYNFQEVFSQNSISIRRLGVNMVF
DYVDMEKSDHLYYQNALGFMTYMPNSYNNNLGNANNTIYYYDKSIDFYAS
GKTLFTKAEFSQTFTGQNSAIVFGAKSIWTSLSDAPQSNTIIRFGDNKGA
GSNDASGHCWNLQCIGFITGHYEAQKIYITGSIESGNRISSGGGASLNFN
GLQGILLTNATLYNRAAGTQSSSMNFISNSANIQAQNSYFIDDTAQNGGN
PNFSFNALNLDFSNSSFRGYVGKTQSVFKFNAKNAISFTNSTNLSSGLYQ
MQAKSVLFDNSNLSVSVGTSSIKANAINLSQNASINASNHSTLELQGDLN
VNDTSSLNLNQSTINVSNNATINDYASLIASNGSHLNFNGAVNFNSANIT
TSLNNSSIVFKGAVSLGGQFNLSNNSSLDFQGSSAITSNTAFNFYDNAFS
QSPITFHQALDIKAPLSLGGNLLNPNNSSVLDLKNSQLVFGDQGSLNIAN
IDLLSDLNDNKNRVYNIIQADMNSNWYERISFFGMHINDGIYDAKNQTYS
FTNPLNNALKITESFKDNQLSVTLSQIPGIKNTLYNIGSEIFNYQKVYNN
ANGVYSYSDDAQGVFYLTSNVKGYYNPNQSYQASGSNNTTKNNNLTSESS
IISQTYNAQGNPISALHIYNKGYNFNNIKALGQMALKLYPEIKKVLGNDF
SPSSLNALNSNALNQLTKLITPNDWKNINELIDNANNSVVQNFNNGTLIV
GATQIGQTDTNSAVVFGGLGYQTPCDYTDIVCQKFRGTYLGQLLESSSAD
LGYIDTTFNAKEIYLTGTLGSGNAWGTGGSASVTFNSQTSLILNQANIVS
SQTDGIFSMLGQEGINKVFNQAGLANILGEVAVQSINKAGGLGNLIVNTL
GSNSVIGGYLTPEQKNQTLSQLLGQNNFDNLMNDSGLNTAIKDLIRQKLG
FWTGLVGGLAGLGGIDLQNPEKLIGSMSINDLLSKKGLFNQITGFISAND
IGQVISVMLQDIVKPSNALKNDVAALGKQMIGEFLGQDTLNSLESLLQNQ
QIKSVLDKVLAAKGLGPIYEQGLGDLIPNLGKKGLFAPYGLSQVWQKGDF
SFNAQGNVFVQNSTFSNANGGTLSFNAGNSLIFAGNNHIAFTNHAGTLQL
LSDQVSNINITTLNASNGLKINAANNNVSVSQGNLFVSASCAQQSDPTTA
NIANPCALSAQSTNGASSNNASNNAPIALSNNDESLMVAANDFNFSGNIY
ANGVVDFSKIKGSANIKNLYLYNNAQFQANNLTISNQAVLEKNASFVTNN
LNIQGAFNNNATQKIEVLQNLVIASNASLSTGIYGLEVGGALNNSGAIHF
NLENTQTPTPLIQAEGIINLNTTQTPFMNVNNSMANNTTYTLLKSSRYID
YNINPNSLQSYLNLYTLININGNHIEEKNGALTYLGQRVLLQDKGLLLSV
ALPNSNNASQNNILSLSVLYNQVKMSCGDKAMDFTPPTLQDYIVGIQGQS
ALNQIEAVGGNAIKWLSTLMMETKENPFFAPIYLKNHSLNEILGVTKDLQ
NTASLISNPNFRDNATNLLELASYTQQTSRLTKLSDFRSREGESDFSLLE
LKNKRFSDPNPEVFVKYSQLSKHPNNLWVQGVGGASFISGGNGTLYGLNA
GYDRLVKNVILGGYVAYGYSDFNGNIMHSLGNNVDVGMYARAFLKRNEFT
LSANETYGGNATSINSSNSLLSVLNQRYNYNTWTTSVNGNYGYDFMFKQK
SVVLKPQVGLSYHFIGLSGMKGNDAAYKQFLMHSNPSNESVLTLNMGLES
RKYFGKNSYYFVTARLGRDLLIKSKGSNTVRFVGENTLLYRKGEVFNTFA
SVITGGEMHLWRLVYVNAGVGLKMGLQYQDINITGNVGMRVAF
>gid:300  HP0295  flagellin B homolog (fla)
MRVTFGSKYNQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNL
KFQYEENTLDQGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSAND
VHSETSRAAIANDLERLKEHMINVANTSIGGEFLFGGSKVDRPPIDSNGK
YHGNGEDLNVLISSDNLVPYNISGQDLFLGTDKDKHKLITTNIKLFNQNK
LHPDVMDALEHSSLPEEVFIKPSDTLRELIGDNDKDPTNDPKEFFYLQGV
RPDGSSFKEKFALDKAYQNQESASKVSDLLDKIAHAYGNTSQNKVVDVSL
NNWGQIEIKNLTPGSENLDFHLISSDGDFDDLDALRSSGKRVTEYIKSAF
VTDRSLSQVKAVPNMYNPKVLEVPSVFVTKDNVLANKNTKLSEIFGDSVE
TLKINASRLDETSAIKIPNLPVYLDIPILLDVKNSTIKDLKDAIKKRFNN
EVDVEIETNGRLRIIDNSSKESPISLALSALDAKGLEVAGIPTNNASEYQ
KTYFNKEGAKLESNVAQTAQNGAANGSTKLSEAAKGSLENSVFNMKLNDV
NGLFLEAQMNLDNNGAFLSLPNGIKIPLYDPTSADIQASKPNEVTYRQLM
DAMSIALNYSNTDPAIYQQISDNPTSKESKERFIGLLKQAKDNLSVNLNE
EGKVIIQDNMHSNTKMQFMLFDKDANDFSQNALHSDKPSLKLNANNALII
DKPSVNFFDQLENTITSVRKGIYRPDALGDTYSSDMRNLGIQNGITLIDH
LSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIRGETTGTDMAETYN
KFSNLTNNYNAVLASTNKINNLSLTKYL
>gid:330  HP0325  flagellar basal-body L-ring protein (flgH)
MKKALYLGAVAFSVAFSMASANEPKIDFNPPNYVEETPSKEFIPELNKLG
SLFGQGERPLFADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNST
PPRLTYNGLDERKKKEAEYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLE
IVLSARIIKVLENGNYFIYGNKEVLVDGEKQILKVSGVIRPYDIERNNTI
QSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY
>gid:357  HP0351  flagellar basal-body M-ring protein (fliF)
MDLKVLLQRIVDFFIKLNKKQKIALIAAGVLITALLVFLLLYPFKEKDYT
QGGYGVLFEGLDSSDNALILQHLQQNQIPYKVSKDDTILIPKDKVYEERI
TLASQGIPKTSKVGFEIFDTKDFGATDFDQNIKLIRAIEGELSRTIESLN
PILKANVHIAIPKDSVFVAKEVPPSASVMLKLKPDMKLSPTQILGIKNLI
AAAVPKLTIENVKIVNENGESIGEGDILENSKELALEQLHYKQNFENILE
NKIVNILAPIVGGKNKVVARVNAEFDFSQKKSTKETFDPNNVVRSEQNLE
EKKEGASKKQVGGVPGVVSNIGPVQGLKDNKEPEKYEKSQNTTNYEVGKT
ISEIKGEFGTLVRLNAAVVVDGKYKIALKDGVNTLEYEPLSDESLQKINA
LVKQAIGYNQNRGDDVAVSNFEFNPMAPVIDNATLSEKIMHKTQKILGSF
TPLIKYILVFIVLFIFYKKVIVPFSERMLEVVPDEDKEVKSMFEEMDEEE
DELNKLGDLRKKVEDQLGLNASFSEEEVRYEIILEKIRGTLKERPDEIAM
LFKLLIKDEISSDGAKG
>gid:358  HP0352  flagellar motor switch protein (fliG)
MATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEIS
KQIVQLNGTDKQIGAAVLEEFFAIFQSNQYINTGGLEYARELLTRTLGSE
EAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIALILAHME
APNAAETLSYFPDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTS
YKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGAIKEMMFTFED
IVKLDNFAIREILKVADKKDLSLALKTSTKDLTDKFLNNMSSRAAEQFVE
EMQYLGAVKIKDVDVAQRKIIEIVQSLQEKGVIQTGEEEDVIE
>gid:359  HP0353  flagellar export protein (fliH)
MSLNSRKNLIQKDHLNKHDIQKYEFKNMANLPPKTNPNSASLETPNLEEP
LEKKAIENDLIDCLLKKTDELSSHLVKLQMQFEKAQEESKVLIENAKNDG
YKIGFKEGEEKMRNELTHSVNEEKNQLLHAITTLDEKMKKSEDHLMALEK
ELSAIAIDIAKEVILKEVEDNSQKVALALAEELLKNVLDATDIHLKVNPL
DYPYLNERLQNASKIKLESNEAISKGGVMITSSNGSLDGNLMERFKTLKE
SVLENFKV
>gid:400  HP0391  purine-binding chemotaxis protein (cheW)
MSNQLKDLFERQKEASAGSKQEDNEEVLQFIGFIIGDEEYAIPILNILEI
VKPIGYTRVPETPNYVLGVFNLRGNVFPLISLRLKFGLKAEKQNKDTRYL
VVRHNDQIAGFFIDRLTEAIRIKQTDIDPVPETLSDNNNLTYGIGKQNDR
LVTILRVEEILKKDF
>gid:402  HP0393  chemotaxis protein (cheV)
MAEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTL
FEYPTNLDYIIGVFDLRSIIIPLIDLAKWIGIIPDKSKENEKIVIITEFN
NVKMGFLVHSARRIRRISWKDVEPASFSASNSINKENITGTTRIENDKTL
LILDLESILDDLKLNEDAKNAKDTHKERFEGEVLFLDDSKTARKTLKNHL
SKLGFSITEAVDGEDGLNKLEMLFKKYGDDLRKHLKFIISDVEMPKMDGY
HFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVKFDAEKFT
EEISKILDKNA
>gid:538  HP0525  virB11 homolog
MTEDRLSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICY
NGNKVVWVLKNNGEWQPFDVRDRKAFSLSRLMHFARCCASFKKKTIDNYE
NPILSSNLANGERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGF
YNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEER
IISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELR
SSEAYDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFE
SLIEGFKDLIDMIVHINHHKQCDEFYIKHR
>gid:552  HP0539  cag pathogenicity island protein (cag18)
MKTLVKNTISSFLLLSVLMAEDITSGLKQLDSTYQETNQQVLKNLDEIFS
TTSPSANNEMGEEDALNIKKAAIALRGDLALLKANFEANELFFISEDVIF
KTYMSSPELLLTYMKINPLDQNTAEQQCGISDKVLVLYCEGKLKIEQEKQ
NIRERLETSLKAYQSNIGGTASLITASQTLVESLKNKNFIKGIRKLMLAH
NKVFLNYLEELDALERSLEQSKRQYLQERQSSKIIVK
>gid:560  HP0547  cag pathogenicity island protein (cag26)
MTNETIDQTRTPDQTQSQTAFDPQQFINNLQVAFIKVDNVVASFDPDQKP
IVDKNDRDNRQAFDGISQLREEYSNKAIKNPTKKNQYFSDFIDKSNDLIN
KDNLIDVESSTKSFQKFGDQRYQIFTSWVSHQKDPSKINTRSIRNFMENI
IQPPIPDDKEKAEFLKSAKQSFAGIIIGNQIRTDQKFMGVFDESLKERQE
AEKNGGPTGGDWLDIFLSFIFNKKQSSDVKEAINQEPVPHVQPDIATTTT
DIQGLPPEARDLLDERGNFSKFTLGDMEMLDVEGVADIDPNYKFNQLLIH
NNALSSVLMGSHNGIEPEKVSLLYAGNGGFGDKHDWNATVGYKDQQGNNV
ATLINVHMKNGSGLVIAGGEKGINNPSFYLYKEDQLTGSQRALSQEEIRN
KVDFMEFLAQNNTKLDNLSEKEKEKFQNEIEDFQKDSKAYLDALGNDRIA
FVSKKDTKHSALITEFNNGDLSYTLKDYGKKADKALDREKNVTLQGSLKH
DGVMFVDYSNFKYTNASKNPNKGVGATNGVSHLEAGFNKVAVFNLPDLNN
LAITSFVRRNLENKLTAKGLSLQEANKLIKDFLSSNKELAGKALNFNKAV
AEAKSTGNYDEVKKAQKDLEKSLRKREHLEKEVEKKLESKSGNKNKMEAK
AQANSQKDEIFALINKEANRDARAIAYTQNLKGIKRELSDKLEKISKDLK
DFSKSFDEFKNGKNKDFSKAEETLKALKGSVKDLGINPEWISKVENLNAA
LNEFKNGKNKDFSKVTQAKSDLENSVKDVIINQKVTDKVDNLNQAVSVAK
AMGDFSRVEQVLADLKNFSKEQLAQQAQKNEDFNTGKNSELYQSVKNSVN
KTLVGNGLSGIEATALAKNFSDIKKELNEKFKNFNNNNNGLKNSTEPIYA
KVNKKKTGQVASPEEPIYTQVAKKVNAKIDRLNQIASGLGGVGQAAGFPL
KRHDKVDDLSKVGLSASPEPIYATIDDLGGPFPLKRHDKVDDLSKVGRSR
NQELAQKIDNLNQAVSEAKAGFFGNLEQTIDKLKDSTKKNVMNLYVESAK
KVPASLSAKLDNYAINSHTRINSNIQNGAINEKATGMLTQKNPEWLKLVN
DKIVAHNVGSVSLSEYDKIGFNQKNMKDYSDSFKFSTKLNNAVKDIKSGF
THFLANAFSTGYYCLARENAEHGIKNVNTKGGFQKS
>gid:596  HP0584  flagellar switch protein (fliN)
MSETEANKLKVAEKEKEKANKERELELSTYLEELICDYKNLLDMEIVFSA
ELGSTQIPLLQILRFEKGSVIDLQKPAGESVDTFVNGRVIGKGEVMVFER
NLAIRLNEILDSNAIVYYLAKNS
>gid:611  HP0599  hemolysin secretion protein precursor (hylB)
MFGNKQLQLQISQKDSEIAELKKEVNLYQSLLNLCLHEGFVGIKNNKVVF
KSGNLASLNNLEEQSVHFKENAESVNLQGVSYSLKSQNIDGVQYFSLAKN
TSCVGEYHKNDLFKTFCASLKEGLENAQESMQYFHQETGALLNAAKNGEA
HSTEGLGTVNKTGQDIESLYEKMQNATSLADSLNQRSNEITQVISLIDDI
AEQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAEKTQKATKEIAVVV
KSMQQEANDIQTNTHDINSIVSSIKGDVEELKSTVKNNMIVAQAAKYTIY
NINNRVFCGLAKLDHVVFKNNLYGMVFGLNSFDITSHKNCRLGKWYYEGA
GKENFSNTSGYRALESHHASVHAEANDLVKAVQEDHITDSKYLEHKVHLM
EDSAKHVRENIDKMFYEKQDELNKIIEKIQKGE
>gid:613  HP0601  flagellin A (flaA)
MAFQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTV
ADSLRSQASSLGQAIANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAA
QDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVG
AYSNQSIKASIGSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVT
LESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSDVAVQSGSLS
NLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLR
SIDGRGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSI
NVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGNFNANVKSASGANYN
AVIASGNQSLGSGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMIS
TVNNISITQVNVKAAESQIRDVDFAEESANFNKNNILAQSGSYAMSQANT
VQQNILRLLT
>gid:621  HP0609  H. pylori predicted coding region HP0609
MTYRSSKTDLKNERFSKNRSFKGIKKKIAKKYTIKNSPLTIYSLKTHSNP
SLSINKKIFLGLGFVSALSAEDYNSSVYWLNSVNENNNNKSYYISPLRTW
AGGNRNFTQNYNNSQLYIGTKNASSTPNHSSVWFGEKGYVGFITGVFKAK
DIFITGAVGSGNEWKTGGGAILVFESSNELSANGAYFQNNRAGTQTSWIN
LISNNSVNLTNTDFGNQTPNGGFNAMGRKITYNGGIVNGGNFGFDNVDSN
GATTISGVTFNNNGALTYKGGNGIGGSITFTNSNINHYKLNLNANSVTFN
NSALGSMPNGNANTIGNAYILNASNITFNNLTFNGGWFVFNIPDAHVNFQ
GTTTINNPTSPFVNMTGKVTINPNAIFNIQNYTPSIGSAYTLFSMKNGSI
TYNDVNNLWNIIRLKNTQATKDADKNHTSSNNNTHTYYVTYNLGGTLYNF
RQIFSPDSIVLQSVYYGANNLYYTNSVNIHDNVFNLKNINDDKADTIFYL
NGLNTWNYTNARFTQTYGGKNSALVFNATTPWANGSIPKSNSTVRFGGYE
GVNWGKTGYITGTFTADRVYITGNMMTGNGAQTGGGATLNFVGATEINIA
GATFKNLKTTSQNSYMTFMALGDSSGSAKINVSQSDFYDWTGGGYDFTGN
GVFDSVNFNKAYYKFQGTENSYNFKNTNFLAGNFKFQGKTTIEKSVLSDA
SYTFDGTNNTFTEDKFNNGSFNFSHAEQTDAFNNNSFNGGSFSFNAKQVN
FSGNSFNGGVFNFNNTPKVSFTDDTFNVNNQFKINGTQTTFTFNKGVVFN
MQGLLSSLSVGTTYQLLNAKSVDYKDNNALYQMLRWISGENPSGTLVNKD
QSAPNSAKIYNVHFTDNGLTYYIKENFNNGITLTRLCTLGYTHCVNIDND
AFNLKNVNNNASNTVFYLNGMTTWKIAGTGVFTQDYSGANSVLVFNQTTP
FLAGANPTSNSVVSFGKTSGAEWGLVGYIQGVFKANQIDITGTIRSGNGA
KTGGGATLVFNAQKRLNIANAHLNNDKAGLQNSWMNFIVNNGNLNVTNAK
FSNQTPHGGFNLKANNITWDKGSVNGGGNFGVDNADSNGATTISGVTFNN
NGTLIYKGGENSAGNSLTLENNTFNSYNINAKAQNLIFNNNSFNGGSYSF
NDTKNTTFKGTNTLINSDPFSRLKGSVSIENNSVFNIERDLTDKTTYTLL
SGNSIKYNNQALAGQCFFKKFMEFNPLWWRTRDSIKSG
>gid:622  HP0610  toxin-like outer membrane protein
MQFTQSNGQKFVFEETFNPGSITYKYFTIHSSLFHTDADSKDIWSQVRKQ
FDFIPGKTPVCVGVCYIAPYKNQDLIGSSAFAWSLNFGATVVGTLLLGSA
QEKANNNGGSIWFGKNNLLYLHGNFNATNIFLTNNFNVGNPNAGGGATIN
FNADETLNADGLNYTNFQTVALGLQTSASQHSWANFNSKLSMEIKNSNFR
DFTWGGFNFNSGRITFENTTFSGWTNINGATESGSSYVNMVANTDLIFSN
SILGGGIRYDLKANNIIFNNSQMVIDVSKNVNQSSLNGNVTFNNSRLSVK
PNAAINIGDSQTQTALENASSLSFYNNSVANFNGTTAFNGVSYLNLNPNA
QVSFNQVNFNNANVTFYGIPLFGKTPDFGNSARLINFKGNTNFNQATLNL
RAKNIHINFQGVSTFKQNSTMNLAESSQASFNALKVEGETNFNLNNSSLL
NFNGNSVFNAPVSFYANHSQISFTKLATFNSDASFDLSNNSTLNFQSVLL
NGALNLLGNGSNNLAINAKGNFSFGSKGILNLSYMNLFGGDKKTSVYDVL
QAQNIDGLMGNNGYEKIRFYGIQIDKADYSFDNGVHSWRFTNPLNTTETI
TETLHNNRLKVQISQNGVSNNKMFNLAPSLYDYQKNPYNETENSYNYTSD
KVGTYYLTSNIKGFNQNNKTPGTYNAQNQPLQALHIYNQAITKQDLNMIA
SLGKEFLPKIANLLSSGALDNLNSPNSFETLFGIFEKYGITLNQENWKSL
LKIINNFSNTTNYDFSQGNLVVGAIKEGQTNTKSVVWFGGEGYKEPCAVG
DNTCQMFRQTNLGQLLHSSTPYLGYINANFRAKNIYITGTIGSGNAWGSG
GSANVSFESGTNLVLNQAKIDAQGTDKIFSYLGQGGIEKLFGEKGLGNAL
SNIIYEESLNDNAIPKDLANMIPKDFGSKTLSSLLSPTEVNNLLGVSAFK
NAIMEILNSKTVGDVFGENGLLNALDPTERKKIDQMLLEQIQAHSSGFEK
FIVKTLGIENVENFINNWYGKQSLSSFANNFVPGGLNQALDKIGSSSDAK
DLQNFLDKTTFGDILNQMIEQAPLINKLISWLGPQDLSVLVNIALNSITN
PSKELTSTISSIGEKALNDLLGDGVVNKIMSNQVLGQMINKIIADKGFGG
VYQQGLGSILPQSLQDELKKLGMGSLLGSRGLHNLWQRGNFNFVAKDYLF
TNNSSFSNATGGELNFVAGKSIIFNGKNTINFTQYQGKLSFISKDFSNIS
LDTLNATNGLTLNAPKNDISVQKGQICVNVLNCMGEKKAHSSSATAPTNE
TLEANANNFAFLGAIKANGLVDFSKVLQNTTIGTLDLGPNATFKANHLIV
NNAFNNNSNYRADISGNLNVVKGAALSTNENGLNVGGDFKSEGSLIFNLN
NKTNQTIINVAGNSTIMSYNNQALIHFNTQLKQGAYTLINAKRMLYGYDN
QIIRGGSLSDYLKLYTLIDFNGKRMQLNGDSLSYDNQPVNIKDGGLVVSF
KDNQGQMVYSSILYDKVQVSVSDKPMDIHAPSLEYYIKYIQGSAGLDAIK
SAGNNSILWLNELFVAKGGNPLFAPYYLQDNPTEHIVTLMKDITSALGML
SKPNLKNNSTDALQLNTYTQQMSRLAKLSNFASFDSTDFSERLSSLKNQR
FADAIPNAMDVILKYSQRDKLKNNLWATGVGGVSFVENGTGTLYGVNVGY
DRFIKGVIVGGYAAYGYSGFYERITNSKSDNVDVGLYARAFIKKSELTFS
VNETWGANKNQISSNDTLLSMINQSYKYSTWTTNAKVNYGYDFMFKNKSI
ILKPQIGLRYYYIGMTGLEGVMHNALYNQFKANADPSKKSVLTIELALEN
RHYFNTNSYFYAIGGFGRDLLVNSMGDKLVRFIGNNTLSYRKGELYNTFA
SITTGGEVRLFKSFYANAGVGARFGLDYKMINITGNIGMRLAF
>gid:628  HP0616  chemotaxis protein (cheV)
MVRDIDKTTSLHLNNEAQFLCFRLDAEKDAQLYGMNIFKIREIIHYDGEV
TEILGGSDGVMLGFLSVRGESIPLVDVKRWLHYNANDPSRDLKECSVKDD
HNLVIVCHFSNHSIALKVLKIERIIHKNWTEISAGDKQGINEEGKLSAIT
RFDEERVVQILDVEKMISDVFPSLKDLDDLTLRCIEAIQSQKLILIAEDS
LSALKTLEKIVQTLELRYLAFPNGRELLDYLYEKEHYQQVGVVITDLEMP
NISGFEVLKTIKADHRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKSN
ILEIHEMLKKTLS
>gid:695  HP0685  flagellar biosynthetic protein (fliP)
MILTFFIMEPSLKKAYDTGIKPYMDKKISYTEAFEKSALPFKEFMLKNTR
EKDLALFFRIRNLPNPKTPDEVSLSVLIPAFMISELKTAFQIGFLLYLPF
LVIDMVISSILMAMGMMMLPPVMISLPFKILVFILVDGFNLLTENLVASF
KMV
>gid:758  HP0751  polar flagellin (flaG)
MVNEVQGIGIPTSHTSVQTTPTKEISRTNTINTVDESKTTIDPDQYKPKL
ELLSERLNEEMKRIGTDINFSYNDTIKGLVVSVKDANGDKVIREIPSKEA
VELMQRMRDVIGIIFDKRG
>gid:759  HP0752  flagellar hook-associated protein 2 (fliD)
MAIGSLSSLGLGSKVLNYDVIDKLKDADEKALIAPLDKKMEQNVEKQKAL
VEIKTLLSALKGPVKTLSDYSTYISRKSNVTGDALSASVGVGVPIQDIKV
DVQNLAQGDINELGAKFSSRDDIFSQVDTTLKFYTQNKDYAVNIKAGMTL
GDVAQSITDATNGEVMGIVMKTGGNDPYQLMVNTKNTGEDNRVYFGSHLQ
STLTNKNALSLGVDGSGKSEVSLNLKGADGNMHEVPIMLELPESASIKQK
NTAIQKAMEQALENDPNFKNLIANGDISIDTLHGGESLIINDRRGGNIEV
KGSKAKELGFLQTTTQESDLLKSSRTIKEGKLEGVVSLNGQKLDLSALTK
ESNTSEENTDAIIQAINAKEGLSAFKNAEGKLVINSKTGMLTIKGEDALG
KASLKDLGLNAGMVQSYEASQNTLFMSKNLQKASDSAFTYNGVSITRPTN
EVNDVISGVNITLEQTTEPNKPAIISVSRDNQAIIDSLTEFVKAYNELIP
KLDEDTRYDADTKIAGIFNGVGDIRAIRSSLNNVFSYSVHTDNGVESLMK
YGLSLDDKGVMSLDEAKLSSALNSNPKATQDFFYGSDSKDMGGREIHQEG
IFSKFNQVIANLIDGGNAKLKIYEDSLDRDAKSLTKDKENAQELLKTRYN
IMADVLPLMIAKSLKPIKNSIPCK
>gid:760  HP0753  flagellar protein (fliS)
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIENEDIEKK
IYYINRVTDIFTELLNILDYEKGGEVAVYLTGLYTHQIKVLTQANVENDA
SKIDLVLNVARGLLEAWREIHSDELA
>gid:777  HP0770  flagellar biosynthetic protein (flhB)
MAEEEKTELPSAKKIQKAREEGNVPKSMEVVGVLGLLAGLISIFVFFIWW
VDGFSEMYRHVLKDFSLDFSKESVQELFNQLAKDTFLLLLPILIILVVVA
FLSNVLQFGWLFAPKVIEPKFSKINPINGVKNLFSLKKLLDGSLITLKVF
LAFFLGFFIFSLFLGELNHAALLNLQGQLLWFKNKALWLISSLLFLFFVL
AFIDLAIKRRQYTNSLKMTKQEVKDEYKQQEGNPEIKAKIRQMMLKNATN
KMMQEIPKANVVVTNPTHYAVALKFDEEHPVPVVVAKGTDYLAIRIKGIA
REHDIEIIENKTLARELYRDVKLNAAIPEELFEAVAIVFAQVAKLEQERQ
KQKIIKPL
>gid:816  HP0809  H. pylori predicted coding region HP0809
MAEEQENTAQQPPKKSKALLFVIIGSVLVMLLLVGVIIMLLMGNKEESKE
NASKNTQEVQANPMANKNQEAKEGSNIQQYLVLGPLYAIDAPFAVNLVSQ
NGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKSVEEVVTNK
GKNKLKDEIKSHLNSFLIDGFIKNVFFTDFIIQ
>gid:822  HP0815  flagellar motor rotation protein (motA)
MDLSTILGLVLAVASISLGDILEDGNPLHIIHLSSVIIIVPTSLFAAMTG
THARYVKAAYKEIKIVFLNPKINLNETIKNLVELATLARKDGVLSLEGRV
AQIEDDFTRNGLSMIIDGKDLKSVKESLEISIEEMEEYYHGAAHYWETAG
ETAPTMGLVGAVMGLMLALQKLDNPAEMAAGIAGAFTATVTGIMCSYAIF
GPFGHKLKAKSKDIIKEKTVLLEGILGIANGENPRDLENKLLNYIAPGEP
KKSQFEG
>gid:823  HP0816  flagellar motor rotation protein (motB)
MAKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKT
EFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKATI
ARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYIERIAKIIQ
KLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPN
QLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDNEF
NPHKQQE
>gid:913  HP0906  H. pylori predicted coding region HP0906
MPSPINPIHTNASANANALNSGAKNEDAKNAPKSASKDFSKILNQKISKD
KTAPKENPNALKTTPQNSKEGAKEDAKTLEKTPTLPHQHAQNPAKDQQAP
TLKDWLNHKKTTTPHETQHETHEANETNPKTPNETLNKNEKKPNGVTSSV
HQTNLTNKNPITPTNHANNAIKNPTAPTDTKKEPKTLKDIQTLSQKHDLN
ASNIQAATTPENKNPLNASDQLALKTTQTPTNHTLAKNDAKNTANLSSVL
QSLEKKEPQNKEHANPLNNEKKTPPLKEALEMNAIKRDKTLSKKKSEKTP
IHAKTQTTAPSATPENAPKIPLKTPPLMPLIGANPPPNDNIPTPLEKEEK
AKEASDNKEKTKETSNSAQNAQNTQASDKTSDNKSTAPKETIKHFTQQLK
QEIQEYKPPMSRISMDLFPKELGKVEVIIQKVGKNLKVSVISHNNSLQTF
LDNQQDLKNSLNALGFEGVDLSFSQDSSKEQQAPKDQPKEPFKEQELTPL
KENALKSYQENTDNENQETSMQITLYA
>gid:914  HP0907  hook assembly protein, flagella (flgD)
MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPM
ETDKIITQTAQLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALK
DTMENLNKGMDDSLKANNALREVTALNSVSMIGKIAETDVSGANFDGNNK
LSFSLFFDEKIDASKGVPAIQILNENNELVKTIPLKDYNGQKGYINFEWD
GTNEKGEKVPKGNYKIKAEYNLDSHSKQYLQTRIGRGEVESVIFDKGKPM
LRMGEMVLPIDSAIEFYQPDQKPLEQKLSDQKPIDQKPLDQKPQTPPKET
A
>gid:915  HP0908  flagellar hook (flgE)
MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLD
ALNAKSVVANDRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIG
PNKNGEITINKDGFSKKQDNFLTRAGNFARDADGYLVTPEGYYVYGIDLK
KIKDGTLNSTARDEDIEKLHGNTLSPLQIPQDLTYQPVLSTKVNISVNLN
PKDHLKGVQDFFLNDKGEIIKERFLNQDINALANNDNEPIDAITNRKLNI
SIQKEDGKKEDFVFTYGDAEKGENQFKTLGDLQKLLKEKTGLDLNLIKSE
KDAKSPPLLLEIANPSQTPITFSLSGGIADKLGLKADGMELKKGISRDSV
AIKIPYYSTEVDIYDKAGDKYLLQSEYYMTNSNDPTSSPTSKRKNQTWEV
KSYIADPKNKTPINDPTWEIVGFDSATHKMKSAPMTLDFKGNKLTYSLDK
SENHDSSDLSYQDSKLLEASQDGKPRGIFRDMRIEENGVISLAFSNGVVE
PVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEG
KLKFGKIRHKYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEA
ISLKK
>gid:929  HP0922  toxin-like outer membrane protein
MAFKKARLISKFISKGSFKLNKISKKIFTLNQILKCEKPLKRHKKALKPI
KKLSNRNKSFLKASVLLIGALGGLSHLRANECRYWSWSSWSYQDNIESGP
NSPTHNSYCLFSSTQGSGTYYLNTLTTYSAGGASFTQKFNNGTLNVGENI
RFGGTGINGGDVGYITGTYDAQTINFNSSHLTTGNSYADGGGATLNFNAA
NNITINQASFDNSHAGTQKSYMNFKGSNIKVSGSSFTDDTDGGFSFSGNS
NNSTISFNQTSFNQGTYHFSNSATLSFNHSAFNQGTYNFNSTQSAFNNSA
FNQGTYHFNGNASFDNDTFNQGTYSFNTSKVSFSGINTLNSSSPFASLKG
SVSFGSDAIFNLNQTLNNQTYDILTTNGAIQYGVYQSYLWDLINYKGDKA
ISHVEVGNNTYDVTFDINGQDETLQETFNKQSIITQFLGDDLQQQAQKTY
QQDLSNSQSALNNAASDNKIANSDTDYTKNKNATIKKDAQGLENTNQQIA
QDEQALQGDLDKLKQLANSPTGFSEQAFNQAQKQEQQDEQTLQNEEKTFN
SEQEGLKQAIQQAQAQQQKQQQKQEQQQAQQTYQEDLTHSQSALNDVASD
NTIASNDTNYTNNQNTAIKEDAQGLENTNQQIAQDEQALQGDLDKLKQLA
NSPTGFSEQAFNQAQKQEQQDEQTLQNEEKTFNSEQERLKQAIANAKPTS
PTPSHAPTPTKHTAPNTPPNKVPPTPPTQNPPAESVWSGVYWLQNKTYSN
KGIYYIDPNLSGQSGQSGNTLSTYTANLFGRSFSVNIQNGTLIIGNNTES
VNSNGLIWIGHGGFGYITGTFSAANIYLTNNFKTGEGVSNSDGGGANITF
KASDNITMDGLNYNDAETVTKMIQTGASQHSYATFDALNNISVTNSSFSD
MTWGKFSFSAKNISFSNASFSGFTNPGGSSVISANATNSLSFINSRLNGG
AVYNLQANSLIFNNTQAVFNVLYSRGTSNFNATTQLLGNTNFTLSSQSLL
NFNGDTTLQNNANITLGNKSQAAFKNSLTLDNNSNLSLDNQSVLNANNTS
AFNNQASLNIYNGSQATFNSLFFNGGTLSLNASSKLNASNASFSNNTTIN
LDDSVLSASNTSSLNANINFQGASQADFGGNTIIDTASFNFDSASSLNFN
NLTANGALNFNGYTPSLTKALMSVSGQFVLGNNGDINLSDINIFDNITKS
VTYNILNAQKGITGISGANGYEKILFYGMKIQNATYSDNNNIQTWSFINP
LNSSQIIQESIKNGDLTIEVLNNPNSASNTIFNIAPELYNYQASKQNPTG
YSYDYSDNQAGTYYLTSNIKGLFTPKGSQTPQAPGTYSPFNQPLSSLNIY
NKGFSSENLKTLLGILSQNSATLKEMIESNQLDNITNINEVLQLLDKIKI
TQVQKQALLETINHLTDNINQTFNNGNLIIGATQDNVTNSTSSIWFGGNG
YSSPCTLDSATCSSFRNTYLGQLLGSTSPYLGYINADFKAKSIYITGTIG
SGNAFESGGSADVTFQSANNLVLNKANIEAQATDNIFNLLGQKGIEKIFN
QGNLANVLSQVAMEKIKQAGGLGNFIENALSPLSKELPASLQNETLGQLI
GQNNLDDLLNNSGVMNAIQNIISKKLSIFGNFVTPSIIENYLAKQSLKSM
LDDKGLLNFIGGYMNASELSSILSVVLKDITNPPTSLQKDIGVVANDLLN
EFLGQDVIKKLESQGLVSNIINNIISQGGLSGVYNQGLGSVLPPSLQNAL
KENDLGTLLSPRGLHDFWQKGYFNFLSNGYVFVNNSSFSNATGGSLNFVA
NKSIIFNGDNTIDFSKYQGALIFASNDVSNINITTLNATNGLSLNAGLNN
VSVQKGEICVNLANCPTTKNSSSTNSSVTPTNESLSVRANNFTFLGAIAS
NGAIDLSQVKNNSVIDTLNLNENAALQANNLTITNAFNNASNSTANINGN
FTLNQQATLSTNASGLNVMGNFNSYGDLVFNLSHSVSHAIINAQGSATIM
ANNNNPLIQFNTSSKEVGTYTLIDSAKAIYYGYNNQITGGSSLDNYLKLY
TLIDINGKHMVMTDNGLTYNGQAVSVKDGGLVVGFKDSQNQYIYTSILYN
KVKIAVSNDPINNLQAPTLKQYIAQIQGTQGVDSIDQAGGSQAINWLNKI
FETKGSPLFAPYYLESHSTKDLTTIAGDIANTLEVIANPNFKNDATNILQ
INTYTQQMSRLAKLSDTSTFASADFHERLEALKNKRFADAIPNAMDVILK
YSQRNRVKNNVWATGVGGASFINGGTGTLYGINVGYDRFIKGVIVGGYAA
YGYSGFHANITQSGSSNVNMGVYSRAFIKRSELTMSLNETWGYNKTFINS
YDPLLSIINQSYKYDTWTTDAKINYGYDFMFKDKSVIFKPQIGLAYYYIG
LSGLRGIMDDPIYNQFRANADPNKKSVLTINFALESRHYFNKNSYYFVIA
DVGRDLFINSMGDKMVRFIGNNTLSYRDGGRYNTFASIITGGEIRLFKTF
YVNAGIGARFGLDYKDINITGNIGMRYAF
>gid:999  HP0987  H. pylori predicted coding region HP0987
MLDRAILDTKLDSRPMDLSFLDDILKHMQKPRFSDSDKVDKRLLIKFNQF
KPPKQKSQISLVFGMNALVPLGTIKTL
>gid:1006  HP0994  H. pylori predicted coding region HP0994
MSFLSIPINEKSLSFIKNNFQAQIQALEQFYPIIKNALNLGLNPSSIKFG
GGTALSMYYFQHRLSFDMDLFVNDAQCLGFFSPKLWIDNCSHFDSTRYID
QHNHIGVTNKDNIKIDVLVDYASNEGYVDNSKKIFAFDIYIESLENIIAK
KITFRKTDNKTRDIFDIAVALHNDNNLFDKLLSSQKITKQDLLTLQNSLQ
ELDKKRYSIEIDMVEPISHYKDLSLSAYDFLIDKIDQIKTATYSNSHDNA
DDLDNSNEYTPTPKRRR
>gid:1042  HP1030  fliY protein (fliY)
MQDFIKIFIQEVVSTLEGLVGKAPSVGLEKEISSSDESFLKLISTPYARV
VISAIEKEESSIELLAPVVLVTSLSDLMLGGEGASKEEMDNDDLDAFKEM
ASNIFGAIATSLKSQELLPKLNFTTINAEIAKELPKKEDYAKAMVFSFKM
EAIKESQIILLTTAAFEGQFEKTHKEEKEETTEGVAEEVKTHDASLENIE
IRNISMLLDVKLNVKVRIGQKKMILKDVVSMDIGSVVELDQLVNDPLEIL
VDDKVIAKGEVVIVDGNFGIQITDIGTKKERLEQLKH
>gid:1043  HP1031  flagellar motor switch protein (fliM)
MADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSK
EQLRSFRSIHDKMARNLSSQVSSIMRSIVEIQLHSVDQMTYGEFLMSLPS
PTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIE
LNLLDTILRQVMQILKEVWSPVVEMFPTIDAKESSANVVQIVAQNEISIM
VVLEIIIGHSRGMMNICYPVISIESILSKMGSRDLMLSETNSKKSRNKEL
QALLSGVSVDMIVFLGAVELSLKEMLDLDVGDTIRLNKIANDEVSVYVHK
KKRYLASVGFQGYRKTIQIKEVIYSEKERTKEILEMLEEQRRGKVGDIMK
IEEE
>gid:1047  HP1035  flagellar biosynthesis protein (flhF)
MVKFYTYSGETAAEALKIAQSHHGVDTLVFKTQEIRKKTLTSSGLYEIVV
AVEEESENKPSKAPLIPESLYDEELNEEDVVMQLSSTVEEMRKLAGVSSS
QRHYSFSKNKTLLEKDAPLEDAPLEANKQDALLQALKDEANHKKEREKRE
VKQEEEIKDINLQLSKIRDSLKLIQNMFWDEKNPNSINIPQEFAEIYKLA
KQSGMKPSHLDEIMQLSLELMPLRMRENSVTIKRYFREVLRKMILCCPED
LNLRQKRILMLVGPTGVGKTTTLAKLAARYSRMLAKKYKVGIITLDNYRI
GALEQLSWYANKMKMSIEAVIDAKDFAKEIEALEYCDFILVDTTGHSQYD
KEKIAGLKEFIDGGYNIDVSLVLSVTTKYEDMKDIYDSFGVLGIDTLIFT
KLDESRGLGNLFSLVHESQKPISYLSVGQEVPMDLKVATNEYLVDCMLDG
FSNPNKEQA
>gid:1053  HP1041  flagellar biosynthesis protein (flhA)
MANERSKLAFKKTFPVFKRFLQSKDLALVVFVIAILAIIIVPLPPFVLDF
LLTISIALSVLIILIGLYIDKPTDFSAFPTLLLIVTLYRLALNVATTRMI
LTQGYKGPSAVSDIITAFGEFSVSGNYVIGAIIFSILVLVNLLVVTNGST
RVTEVRARFALDAMPGKQMAIDADLNSGLIDDKEAKKRRAALSQEADFYG
AMDGASKFVKGDAIASIIITLINIIGGFLVGVFQRDMSLSFSASTFTILT
IGDGLVGQIPALIIATATGIVATRTTQNEEEDFASKLITQLTNKSKTLVI
VGAILLLFATIPGLPTFSLAFVGTLFLFIAWLISREGKDGLLTKLENYLS
QKFGLDLSEKPHSSKIKPHTPTTRAKTQEELKREEEQAIDEVLKIEFLEL
ALGYQLISLADMKQGGDLLERIRGIRKKIASDYGFLMPQIRIRDNLQLPP
THYEIKLKGIVIGEGMVMPDKFLAMNTGFVNKEIEGIPTKEPAFGMDALW
IETKNKEEAIIQGYTIIDPSTVIATHTSELVKKYAEDFITKDEVKSLLER
LAKDYPTIVEESKKIPTGAIRSVLQALLHEKIPIKDMLTILETITDIAPL
VQNDVNILTEQVRARLSRVITNAFKSEDGRLKFLTFSTDSEQFLLNKLRE
NGTSKSLLLNVGELQKLIEVVSEEAMKVLQKGIAPVILIVEPNLRKALSN
QMEQARIDVIVLSHAELDPNSNFEALGTIHINF
>gid:1105  HP1092  flagellar basal-body rod protein (flgG)
MQNGYYAATGAMATQFNRLDLTSNNLANLNTNGFKRDDAITGDFLRLYQQ
YREQLPLEDQTKASAKYLNRNLNRVPILSEIYTDRSLGAFEETHNPLDFA
LTSPNLYFAIQTNEGIAYTRDGHFSVDKDGFLVTLNGFRVLSRSGLNEKG
GIMLMPDAEIEVDQNGGITFRDNEAQIQAGALALVSFSEPKNLKKIGQNL
YTYQGEGVHQVSDSGALRQYMLEKSNVNAVREMSALIEINRFLDMYSKVL
KTHQDDMNAEAINKLAAKA
>gid:1128  HP1115  H. pylori predicted coding region HP1115
MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLK
GIVRILEVLLSLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFF
SDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIF
LNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALTNINEAKE
NANNQITENKTQAITNINEAKNQSLSKH
>gid:1132  HP1119  flagellar hook-associated protein 1 (HAP1) (flgK)
MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQAAY
MYGTKNVNMGVDVEAIERVHDEFVFARYTKANYENTYYDTEFSHLKEASA
YFPDIDEASLFTDLQDYFNSWKELSKNAKDSAQKQALAQKTEALTHNIKD
TRERLTTLQHKASEELKSVIKEVNSLGSQIAEINKRIKEVENNKSLKHAN
ELRDKRDELEFHLRELLGGNVFKSSIKTHSLTDKDSADFDESYNLNIGHG
FNIIDGSIFHPLVVKESENKGGLNQVYFQSDDFKVTNITDKLNQGRVGAL
LNVYNDGSNGTLKGKLQDYIDLLDSFAKGLIESTNAIYAQSASHYIEGEP
VEFNSDEAFKDTNYNIKNGSFDLIAYNTDGKEIARKTIAITPITTMNDII
QAINANTDDNQDNNTENDFDDYFTAGFNNETKKFVIQPKNASQGLFVSMK
DNGTNFMGALKLNPFFQGDDASNISLNKEYKKEPTTIRPWLAPINGNFDV
ANMMQQLQYDSVDFYNDKFDIKPMKISEFYQFLTGKINTDAEKSGRILDT
KKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDT
LLGIKQ
>gid:1191  HP1177  outer membrane protein (omp27)
MKKTKKTILLSLTLAASLLHAEDNGVFLSVGYQIGEAVQKVKNADKVQKL
SDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAY
QATLLALRSVLGLWNSMGYAVICGGYTKSPGENNQKDFHYTDENGNGTTI
NCGGSTNSNGTHSSSGTNTLKADKNVSLSIEQYEKIHEAYQILSKALKQA
GLAPLNSKGEKLEAHVTTSKPENNSQTKTTTSVIDTTNDAQNLLTQAQTI
VNTLKDYCPMLIAKSSSESSGAATTNAPSWQTAGGGKNSCATFGAEFSAA
SDMINNAQKIVQETQQLSANQPKNITQPHNLNLNTPSSLTALAQKMLKNA
QSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNN
WGNGCAGVEETLSSLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRN
MGMIASSTTNNGALNGLGVQVGYKQFFGEKKRWGLRYYGFFDYNHAYIKS
NFFNSASDVWTYGVGSDLLFNFINDKNTNFLGKNNKISVGFFGGIALAGT
SWLNSQFVNLKTISNVYSAKVNTANFQFLFNLGLRTNLARPKKKDSHHAA
QHGMELGVKIPTINTNYYSFLDTKLEYRRLYSVYLNYVFAY
>gid:1363  HP1342  outer membrane protein (omp29)
MKKSLLLSLSLIASLSRAEDDGFYTSVGYQIGEAVQQVKNTGALQNLADR
YDNLNNLLNQYNYLNSLVNLASTPSAITGAIDNLSSSAINLTSATTTSPA
YQAVALALNAAVGMWQVIALFIGCGPGPTNNQSYQSFGNTPALNGTTTTC
NQAYGTGPNGILSIDEYQKLNQAYQIIQTALNQNQGGGMPALNDTTKTGV
VNIQQTNYRTTTQNNIIEHYYTENGKEIPVSYSGGSSFSPTIQLTYHNNA
ENLLQQAATIMQVLITQKPHVQTSNGGKAWGLSSTPGNVMDIFGPSFNAI
NEMIKNAQTALAKTQQLNANENAQITQPNNFNPYTSKDKGFAQEMLNRAE
AQAEILNLAKQVANNFHSIQGPIQGDLEECKAGSAGVITNNTWGSGCAFV
KETLNSLEQHTAYYGNQVNQDRALAQTILNFKEALNTLNKDSKAINSGIS
NLPNAKSLQNMTHATQNPNSPEGLLTYSLDSSKYNQLQTIAQELGKNPFR
RFGVIDFQNNNGAMNGIGVQVGYKQFFGKKRNWGLRYYGFFDYNHAYIKS
NFFNSASDVWTYGVGMDALYNFINDKNTNFLGKNNKLSVGLFGGFALAGT
SWLNSQQVNLTMMNGIYNANVSTSNFQFLFDLGLRMNLARPKKKDSDHAA
QHGIELGFKIPTINTNYYSFMGAKLEYRRMYSLFLNYVFAY
>gid:1439  HP1419  flagellar biosynthetic protein (fliQ)
MESQLMKLAIETYKITLMISLPVLLAGLVVGLLVSIFQATTQINEMTLSF
VPKILAVIGVLILTMPWMTNMLLDYTKTLIKLIPKIIG
>gid:1440  HP1420  flagellar export protein ATP synthase (fliI)
MPLKSLKNRLNQHFDLSPRYGSVKKIMPNIVYADGFNPSVGDVVKIEKSD
GSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLLG
RVLNPLGQVIDNKGALDYERLAPVITTPIAPLKRGLIDEIFSVGVKSIDG
LLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPE
FIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLF
IMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGKEENKG
SITAFFSVLVEGDDLSDPIADQTRSILDGHIVLSRELTDYGIYPPINILN
SASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKELDE
AIKKKALMEQFLAQDENALQPFETSFQQLEEILR
>gid:1441  HP1421  conjugative transfer regulon protein (trbB)
MKTLQTHRVLQALIGHFTPFLESGITELMINTEQELWLYKVNNTREKRGH
ALFDKAFLLRFCEQLASFRGLFFDEEHPTLNCSIPFTRYRVSANHFSITT
NNQITLNIRVPRLKPLSLEDFTFKASDPKSLKDLALKGHNILISGETSSG
KTSLLNALLDCVNKDERVVSVEDSQELDLKAFSNCVGLLVGKQENTRFNY
EDALNMAMRLNPDRLIVGEIDTRNAALFLRLGNTGHKGMLSTIHANSAQN
TLEALSLNLSMRYMYSLDKDLMRAYFKSAIDVIVHVNRINNERQIAEVLW
TKEL
>gid:1478  HP1457  H. pylori predicted coding region HP1457
MLLKTKLKIISSVILSALLWVGCSSEMATYQNVNDATKNTTASINSTDLL
LTANAMLDSMFSDPNFEQLKGKHLIEVSDVINDTTQPNLDMNLLTTEIAR
QLRLRSNGRFNITRASGGSGIAADSRMVKQREKERESEEYNQDTTVEKGT
LKAADLSLSGKVSSIAASISSSRQRLDYDFTLSLTNRKTGEEVWSDVKPI
VKNASNKRMF
>gid:1498  HP1477  H. pylori predicted coding region HP1477
MKILILFFICLNALFALDSNALKAEIKEVYLKEYKDLKLEIETINLEIPE
RFSNASILSYELNASNKLKKDGVVFLRLENDPNLRLPVRYSVIGSMQAFK
SVSAIKKDENITANNTQKERILFGALSNPLLEGAIDKVSAKNFIPPNTLL
STDKTQALIIVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLE
SNKILKAKVLSSSKAQIL
>gid:1577  HP1557  flagellar basal-body protein (fliE)
MQAIHNDKSLLSPFSELNTDNRTKREESGSTFKEQKGGEFSKLLKQSINE
LNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETSMKLMLEVRNKAISA
YKELLRTQI
>gid:1578  HP1558  flagellar basal-body rod protein (flgC) (proximal rod protein)
MFLSSFDISGYGLSAQRLRANLISSNIANANTTRTSEGGPYRRQEAVFKA
FDFNEILNQKIAQNNQITPYEDPLDEGDEYPLIPITSVVVDKIVRDDSEP
LMKYDPSHPDANAQGYVAYPNVNAVVEMADLVEATRAYQANVAAFQSAKN
MAQNAIGMLQT
>gid:1579  HP1559  flagellar basal-body rod protein (flgB) (proximal rod protein)
MDFSKAFGLVYKALDYRSLRQDMIASNIANVDTPFYRPKDLDFESVLAKK
KAEIFENQSSKVLPLAHTNPRHLDFENSAKDGASLFFRDGHLAKNDGNSV
DLDIETSEMGKNSTMYLALSSALKKYRGVINYAIDSSKNL
>gid:1599  HP1579  H. pylori predicted coding region HP1579
MLKKLLFIALFLGFLRAEGEHYEIIVELSKAFLKAQEVLTTIHQAYKTCI
ETGHDRTQIRLQSAFLENLSQTEQQFDDYFEKDFKSVEVLKTLLKNLQSL
EKTSNKLACITPKNAKNFEILEGAITQIIDLEKQMDKFINKN
>gid:1605  HP1585  flagellar basal-body rod protein (flgG)
MLRSLYSATSGMLAQQTHIDTTSNNIANVNTTGFKKSRADFNDLFYQAMQ
YAGTNTSNTTLSPDGMEVGLGVRPSAITKMFSQGSPKETENNLDVAITGK
GFFQVQLPDGTTAYTRSGNFKLDEQGNLVTSEGYLLIPQITLPEDTTQVN
IGVDGTVSVTQGLQTTSNVIGQITLANFVNPAGLHSMGDNLFSITNASGE
AIVGNPDSQGLGKLRQGFLELSNVRLVEEMTDLITAQRAYEANSKSIQTA
DAMLQTVNSLKR