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2024-05-19 07:08:56

Gene list

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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome

Number of genes found: 201

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis biovar Medievalis str. 91001, 91001
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YP0395 Putative salt-induced outer membrane proteinchromosome CDS417955 813 - 0.462485
NA YP1211 hypothetical proteinchromosome CDS1318109 675 - 0.355556
NA YP0518 putative membrane transport proteinchromosome CDS552806 3360 - 0.521429
NA YP0714 conserved hypothetical proteinchromosome CDS774092 759 + 0.43083
NA YP1955 putative exported proteinchromosome CDS2174243 771 + 0.465629
NA YP0768 putative exported proteinchromosome CDS828258 828 - 0.432367
NA YP0617 Predicted nucleoside-diphosphate-sugar epimeraseschromosome CDS660807 639 + 0.561815
NA YP1755 lipoprotein releasing system, transmembrane proteinchromosome CDS1946730 1200 + 0.521667
NA YP2798 putative surface antigenchromosome CDS3107324 2388 - 0.468174
NA YP2799 putative membrane proteinchromosome CDS3109748 1356 - 0.473451
NA YP2907 putative autotransporter proteinchromosome CDS3225395 2985 - 0.447906
NA YP2205 dolichyl-phosphate-mannose-protein mannosyltransferase-family proteinchromosome CDS2453835 1665 - 0.451051
NA YP2651 putative autotransporterchromosome CDS2939632 2280 + 0.442544
NA YP1818 hypothetical proteinchromosome CDS2024125 249 + 0.437751
NA YP3637 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesischromosome CDS4136201 963 - 0.519211
NA YP1697 Glycosyltransferases, probably involved in cell wall biogenesischromosome CDS1874621 1374 + 0.508734
NA YP0770 putative lipoproteinchromosome CDS830913 585 - 0.461538
NA YP4019 putative membrane proteinchromosome CDS4574061 672 - 0.416667
NA YP0440 Predicted nucleoside-diphosphate-sugar epimeraseschromosome CDS465162 651 - 0.534562
NA YP0559 putative exported proteinchromosome CDS596678 1737 + 0.513529
NA YP1775 Predicted nucleoside-diphosphate-sugar epimeraseschromosome CDS1968063 858 - 0.508159
NA YP1757 lipoprotein releasing system, transmembrane proteinchromosome CDS1948627 1251 + 0.490008
NA YP1240 putative membrane proteinchromosome CDS1355424 1491 + 0.525151
acrA1 YP0101 putative secretion permeasechromosome CDS109091 1317 - 0.393318
acrA10 YP3761 putative lipoproteinchromosome CDS4285834 1083 - 0.509695
acrA2 YP0600 multidrug efflux proteinchromosome CDS641188 1161 + 0.525409
acrA3 YP0799 multidrug efflux proteinchromosome CDS863385 1188 - 0.490741
acrA4 YP0975 Membrane-fusion proteinchromosome CDS1049636 987 + 0.522796
acrA5 YP1230 putative HlyD family secretion proteinchromosome CDS1343854 1029 - 0.485909
acrA6 YP1388 putative exported proteinchromosome CDS1528785 1263 - 0.315914
acrA7 YP2624 putative HlyD family secretion proteinchromosome CDS2907608 1206 + 0.498342
acrA8 YP2714 putitive HlyD family secretion proteinchromosome CDS3010024 1335 + 0.542322
acrA9 YP3411 putative drug efflux proteinchromosome CDS3827470 1278 + 0.532864
aefA YP0802 putative potassium efflux systemchromosome CDS865927 3471 + 0.466436
agaS YP3529 putative phosphosugar isomerasechromosome CDS4018282 1167 + 0.472151
ail2 YP2550 attachment invasion locus proteinchromosome CDS2824942 549 + 0.406193
alr YP0476 alanine racemase (biosynthetic)chromosome CDS509006 1080 + 0.546296
amiB YP0526 N-acetylmuramoyl-l-alanine amidase IIchromosome CDS563374 1914 + 0.509404
amiC YP2827 N-acetylmuramoyl-L-alanine amidase AmiC precursorchromosome CDS3138503 1269 - 0.464145
asmA1 YP1415 putative exported proteinchromosome CDS1561356 1755 + 0.4849
asmA2 YP3350 Uncharacterized protein involved in outer membrane biogenesischromosome CDS3750100 2217 - 0.528642
betT1 YP0991 high-affinity choline transport proteinchromosome CDS1067613 2202 - 0.493188
betT2 YP2309 putative quarternary ammonium transport proteinchromosome CDS2568570 1680 - 0.486905
cfa YP2176 cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS2421564 1152 + 0.46441
cotS YP2240 Predicted choline kinase involved in LPS biosynthesischromosome CDS2488373 867 - 0.49827
csgG YP2597 putative lipoproteinchromosome CDS2879014 735 - 0.44898
cutF YP2782 putative copper homeostasis lipoproteinchromosome CDS3092556 729 - 0.429355
cyaE YP2935 putative membrane proteinchromosome CDS3271234 1527 - 0.521938
dacA YP1112 putative penicillin-binding protein 5chromosome CDS1196139 1203 + 0.487116
dacB YP0577 penicillin-binding protein 4 precursorchromosome CDS616148 1449 - 0.482402
dacC YP1272 D-alanyl-D-alanine carboxypeptidasechromosome CDS1388591 1299 - 0.47729
dapA1 YP2647 probable N-acetylneuraminate lyasechromosome CDS2935688 900 + 0.485556
dapA2 YP2684 dihydrodipicolinate synthasechromosome CDS2975361 900 - 0.491111
dapX YP2683 lipoproteinchromosome CDS2974285 1062 - 0.514124
ddg YP3915 putative membrane proteinchromosome CDS4452274 1002 + 0.507984
ddhA YP0815 glucose-1-phosphate cytidylyltransferasechromosome CDS881243 786 + 0.437659
ddhC YP0817 putativeCDP-4-keto-6-deoxy-D-glucose-3-dehydrata sechromosome CDS883124 1314 + 0.42618
ddlB YP3627 D-alanine--D-alanine ligase Bchromosome CDS4124021 921 - 0.5038
dgkA YP0469 diacylglycerol kinasechromosome CDS502030 372 + 0.475806
dgoA1 YP1455 O-succinylbenzoate synthase and related enzymeschromosome CDS1612496 1278 + 0.50939
dgoA2 YP2128 putative mandelate racemase / muconate lactonizing proteinchromosome CDS2373821 975 - 0.521026
fimC9 YP3250 putative exported proteinchromosome CDS3622422 720 - 0.5125
fkpB YP3704 FKBP-type peptidyl-prolyl cis-trans isomerasechromosome CDS4216979 510 - 0.454902
flgJ1 YP1586 flagellar protein FlgJchromosome CDS1737423 945 - 0.540741
flgJ2 YP3042 flagellar protein FlgJchromosome CDS3379919 294 + 0.503401
ftsI YP3635 penicillin-binding protein 3chromosome CDS4134058 1764 - 0.531179
ftsQ YP3626 cell division protein FtsQchromosome CDS4123192 828 - 0.516908
galE YP1020 UDP-glucose 4-epimerasechromosome CDS1098552 1017 + 0.52409
galF YP1429 UTP-glucose-1-phosphate uridylyltransferasechromosome CDS1581908 894 + 0.485459
galU1 YP1428 UTP-glucose-1-phosphate uridylyltransferasechromosome CDS1580934 891 + 0.470258
galU2 YP3791 UDP-glucose pyrophosphorylasechromosome CDS4317452 468 - 0.544872
gidB YP4036 glucose inhibited division protein Bchromosome CDS4592050 672 - 0.456845
glmS YP4025 glucosamine--fructose-6-phosphateaminotransferas echromosome CDS4580283 1830 - 0.472131
glmU YP4026 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS4582313 1377 - 0.474219
gutQ2 YP3909 putative phosphosugar isomerase/binding proteinchromosome CDS4444677 606 - 0.508251
hasB YP3130 putative membrane proteinchromosome CDS3489352 804 + 0.472637
hasE YP3129 HlyD family secretion proteinchromosome CDS3487959 1329 + 0.486832
hasF YP2978 ABC-transporter outer membrane componentchromosome CDS3314502 1404 - 0.47151
hlpA YP2797 cationic 19 kDa outer membrane protein precursorchromosome CDS3106669 591 - 0.450085
ibeB YP0602 probable outer membrane efflux lipoproteinchromosome CDS645479 1407 + 0.510306
imp YP3684 organic solvent tolerance protein precursorchromosome CDS4197281 2343 + 0.478446
kdsA YP1869 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS2077607 855 + 0.501754
kdsB YP1193 putative 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS1292380 753 - 0.512616
kdtA YP0056 3-deoxy-D-manno-octulosonic-acid transferasechromosome CDS65048 1386 - 0.496392
kdtX YP0055 lipopolysaccharide core biosynthesis glycosyl transferasechromosome CDS64265 783 - 0.466156
lepA YP2520 putative GTP-binding elongation factorchromosome CDS2791007 1800 + 0.456667
lgt YP2874 prolipoprotein diacylglyceryl transferasechromosome CDS3189568 873 + 0.4937
lnt YP1097 apolipoprotein N-acyltransferasechromosome CDS1179008 1587 + 0.508507
lolA YP1216 putative outer-membrane lipoproteins carrier proteinchromosome CDS1324941 570 - 0.454386
lolB YP1863 putative lipoproteinchromosome CDS2072105 624 - 0.477564
lpp YP2181 major outer membrane lipoproteinchromosome CDS2427795 246 + 0.455285
lpxA YP2794 acyl-[acyl-carrier-protein]--UDP-N- acetylglucosam ine O-acyltransferasechromosome CDS3104163 789 - 0.470215
lpxB YP2793 lipid-A-disaccharide synthasechromosome CDS3102975 1185 - 0.490295
lpxC YP3623 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylasechromosome CDS4119666 936 - 0.458333
lpxD YP2796 UDP-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS3105643 1023 - 0.461388
lpxK YP1197 tetraacyldisaccharide 4'-kinasechromosome CDS1296213 987 - 0.529889
lrgB YP1403 putative membrane proteinchromosome CDS1548708 696 - 0.481322
lytB YP3702 LytB proteinchromosome CDS4215519 978 - 0.488753
mepA YP2411 putative penicillin-insensitive murein endopeptidasechromosome CDS2680751 870 - 0.534483
mltA YP2826 membrane-bound lytic murein transglycosylase A precursorchromosome CDS3136609 1173 - 0.481671
mltB1 YP1924 putative lipoproteinchromosome CDS2142508 1086 + 0.46593
mltB2 YP2583 putative membrane-bound lytic murein transglycosylase Bchromosome CDS2863673 1113 - 0.514825
mltC YP3487 membrane-bound lytic murein transglycosylase Cchromosome CDS3965868 1089 - 0.461892
mltD YP2771 membrane-bound lytic murein transglycosylase D precursorchromosome CDS3075979 1452 + 0.469008
mltE1 YP2226 putative membrane-bound lytic mureintransglycosylasechromosome CDS2474397 663 - 0.470588
mltE2 YP2535 putative membrane proteinchromosome CDS2804594 1461 - 0.492813
mpl YP0564 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- me so-diaminopimelate ligasechromosome CDS604716 1383 + 0.500362
mraY YP3632 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS4130135 1083 - 0.497692
mrcA1 YP0146 penicillin-binding proteinchromosome CDS159159 2556 - 0.517606
mrcA2 YP1142 putative penicillin-binding proteinchromosome CDS1230976 2364 + 0.525381
mrcB YP0292 penicillin-binding protein 1Bchromosome CDS300327 2496 + 0.533654
mreC YP3880 rod shape-determining protein MreCchromosome CDS4415500 996 - 0.509036
mreD YP3879 rod shape-determining protein MreDchromosome CDS4415015 489 - 0.482618
msbB YP1906 lipid A biosynthesis acyltransferasechromosome CDS2124083 963 + 0.469367
mscL YP0236 mechanosensitive ion channelchromosome CDS235316 423 - 0.423168
mscS1 YP2288 putative membrane proteinchromosome CDS2539759 1248 + 0.504006
mscS2 YP3521 putative membrane proteinchromosome CDS4009284 870 + 0.501149
mtgA YP3806 monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS4332678 726 - 0.498623
murA YP3824 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS4353759 1272 - 0.505503
murB YP3288 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS3671174 1038 + 0.435453
murC YP3628 UDP-N-acetyl-muramate:alanine ligasechromosome CDS4124934 1524 - 0.515092
murD YP3631 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS4128816 1317 - 0.537585
murE YP3634 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diami nopimelate ligasechromosome CDS4132584 1488 - 0.537634
murF YP3633 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamino pimelate--D-alanyl-D-alanyl ligasechromosome CDS4131211 1377 - 0.52215
murG YP3629 UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapep tide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS4126547 1071 - 0.557423
murI YP3139 putative glutamate racemasechromosome CDS3499783 900 + 0.481111
nlpC YP2201 putative lipoproteinchromosome CDS2452367 432 - 0.469907
nlpD2 YP0331 lipoproteinchromosome CDS344918 1002 + 0.478044
nlpD3 YP1905 putative M23/M37 peptidase-family proteinchromosome CDS2122500 1317 + 0.487472
oapA YP0550 Cell envelope opacity-associated protein Achromosome CDS587169 741 - 0.512821
ompA1 YP1326 putative outer membrane porin A proteinchromosome CDS1454074 1092 - 0.498168
ompA2 YP1360 putative exported proteinchromosome CDS1489439 1737 + 0.627519
ompA3 YP2580 putative membrane proteinchromosome CDS2859276 1683 + 0.454545
ompA4 YP3465 putative OmpA-family membrane proteinchromosome CDS3936967 1737 + 0.626367
ompA5 YP3735 putative lipoproteinchromosome CDS4254637 507 + 0.4714
ompA6 YP3986 putative lipoproteinchromosome CDS4537008 660 + 0.542424
ompC1 YP0916 outer membrane protein C, porinchromosome CDS979397 1125 - 0.441778
ompC2 YP1182 putative outer membrane porin C proteinchromosome CDS1275816 1104 + 0.457428
ompC3 YP1712 Outer membrane protein (porin)chromosome CDS1893468 1083 + 0.44506
ompC_1 YP0933 outer membrane protein C2chromosome CDS1006010 1116 + 0.416667
ompW YP1999 putative exported proteinchromosome CDS2221841 648 + 0.459877
ompX YP2321 putative outer membrane proteinchromosome CDS2582664 531 - 0.483992
pal YP1031 peptidoglycan-associated lipoprotein Palchromosome CDS1110867 507 - 0.481262
pbpA YP1109 penicillin-binding protein 2chromosome CDS1191466 1896 + 0.493143
pbpG YP0961 penicillin-binding protein 7 precursorchromosome CDS1036823 936 - 0.457265
pcp2 YP3901 outer membrane lipoproteinchromosome CDS4438018 474 + 0.540084
pla2 YP0910 putative outer membrane-associated proteasechromosome CDS971082 936 + 0.403846
pldA YP3214 phospholipase Achromosome CDS3586190 879 + 0.459613
pmrF YP2208 probable glycosyl transferasechromosome CDS2458398 984 - 0.463415
prc YP1730 tail-specific protease precursorchromosome CDS1912763 2121 + 0.474305
prt YP0818 paratose synthasechromosome CDS884534 798 + 0.353383
racX YP2405 putative aspartate/glutamate racemasechromosome CDS2674218 696 + 0.469828
rfaC YP0057 lipopolysaccharide heptosyltransferase-1chromosome CDS66745 990 - 0.507071
rfaD YP0059 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS68805 942 - 0.451168
rfaE YP2969 ADP-heptose synthasechromosome CDS3306260 1446 + 0.529737
rfaF YP0058 ADP-heptose--LPS heptosyltransferase IIchromosome CDS67710 1077 - 0.51532
rfaL YP3764 putative O-antigen biosynthesis proteinchromosome CDS4288011 1233 - 0.460665
rfaQ YP3765 putative lipopolysaccharide core biosynthesis proteinchromosome CDS4289291 1176 - 0.471088
rfe YP3179 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferasechromosome CDS3548276 1098 + 0.469035
rffA YP3186 putative lipopolysaccharide biosynthesis proteinchromosome CDS3556090 1206 + 0.488391
rffD YP3182 putative UDP-glucose/GDP-mannose dehydrogenasechromosome CDS3551946 1263 + 0.498021
rffE YP3181 UDP-N-acetylglucosamine 2-epimerasechromosome CDS3550765 1185 + 0.502954
rffG YP3183 dTDP-glucose 4,6-dehydratasechromosome CDS3553199 1074 + 0.513035
rffH YP3184 glucose-1-phosphate thymidylyltransferasechromosome CDS3554357 1092 + 0.488095
rhsA1 YP2099 putative insecticidal toxin complexchromosome CDS2339106 2625 + 0.561143
rhsA2 YP3439 Rhs family proteinchromosome CDS3901807 4317 + 0.558258
rhsA3 YP3933 putative membrane proteinchromosome CDS4472528 4542 - 0.548877
rhsA4 YP3941 Rhs family proteinchromosome CDS4481609 1371 - 0.521517
rhsA5 YP3942 putative exported proteinchromosome CDS4483007 2892 - 0.551867
rlpA YP1111 rare lipoprotein A precursorchromosome CDS1194654 1083 + 0.530933
rlpB YP1104 rare lipoprotein B precursorchromosome CDS1188063 624 + 0.520833
sepC YP2166 insecticial toxinchromosome CDS2409720 2955 - 0.547885
slp YP1916 putative outer membrane proteinchromosome CDS2135128 606 + 0.488449
slt YP3731 putative soluble lytic murein transglycosylasechromosome CDS4247120 1950 - 0.51641
slyB YP2159 putative lipoproteinchromosome CDS2402574 468 + 0.536325
spr1 YP1314 putative lipoproteinchromosome CDS1438781 585 + 0.463248
spr2 YP2171 putative exported proteinchromosome CDS2415149 915 + 0.451366
spr3 YP3559 putative lipoproteinchromosome CDS4055710 858 + 0.488345
tolA YP1033 TolA colicin import membrane proteinchromosome CDS1112836 1206 - 0.508292
tonB YP1992 TonB proteinchromosome CDS2215290 759 + 0.492754
ugd YP1973 putative nucleotide sugar dehydrogenasechromosome CDS2194167 1374 + 0.427948
vacJ YP2421 lipoprotein precursorchromosome CDS2692082 777 - 0.51094
vanY YP2676 putative carboxypeptidasechromosome CDS2967915 678 + 0.50885
wbyI YP0821 chromosome pseudo888042 714 + 0.291317
wbyJ YP0822 putative mannosyltransferasechromosome CDS889135 1143 + 0.283465
wbyK YP0824 putative mannosyltransferasechromosome CDS891708 1050 + 0.353333
wbyL YP0828 probable glycosyltransferasechromosome CDS896468 744 + 0.322581
wcaA YP0186 putative glycosyl transferasechromosome CDS203653 990 - 0.493939
wcaG1 YP0816 putative CDP-D-glucose-4,6-dehydratasechromosome CDS881964 1143 + 0.457568
wcaG2 YP0826 putative nucleotide di-P-sugar epimerase or dehydratasechromosome CDS893901 966 + 0.417184
wcaG3 YP1241 Nucleoside-diphosphate-sugar epimeraseschromosome CDS1357014 1008 + 0.515873
wcaG4 YP1440 putative exported proteinchromosome CDS1592650 828 + 0.514493
wcaG5 YP1447 Nucleoside-diphosphate-sugar epimeraseschromosome CDS1602381 1140 + 0.428947
wcaG6 YP1828 putative dehydrogenasechromosome CDS2035171 1017 + 0.53884
wcaG7 YP1831 Nucleoside-diphosphate-sugar epimeraseschromosome CDS2038403 1797 + 0.49527
wcaG8 YP2036 Nucleoside-diphosphate-sugar epimeraseschromosome CDS2260429 1002 + 0.491018
wecE YP2209 conserved hypothetical proteinchromosome CDS2459368 1155 - 0.483983
wecG YP3190 probable UDP-N-acetyl-D-mannosaminuronic acid transferasechromosome CDS3561031 741 + 0.516869
wzz YP0830 O-antigen chain length determinantchromosome CDS898637 1152 + 0.361111
wzzE YP3180 putative lipopolysaccharide biosynthesis proteinchromosome CDS3549391 1080 + 0.484259
yapC YP1153 putaive autotransporter proteinchromosome CDS1238299 1917 + 0.47157