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2024-05-19 00:48:13

Gene list

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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome 1

Number of genes found: 28

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PBPRA2955 putative lipid-A-disaccharide synthasechromosome 1 CDS251991 1143 - 0.444444
NA PBPRA2821 hypothetical proteinchromosome 1 CDS132967 960 - 0.426042
NA PBPRA2841 putative 2-dehydro-3-deoxyphosphooctonate aldolasechromosome 1 CDS155483 855 - 0.431579
CJ1317 PBPRA2707 putative polysaccharide biosynthesis protein, NeuBchromosome 1 CDS3635 1047 - 0.413563
DAPA PBPRA2898 putative dihydrodipicolinate synthasechromosome 1 CDS193642 888 - 0.427928
DNIR PBPRA2921 hypothetical membrane-bound lytic murein transglycosylase Dchromosome 1 CDS217104 1572 + 0.405216
FLAA2 PBPRA2710 putative FlmBchromosome 1 CDS6941 1179 - 0.418151
FLMD PBPRA2708 hypothetical FlmDchromosome 1 CDS4684 1563 - 0.451695
HH0900 PBPRA2709 putative NeuAchromosome 1 CDS6243 699 - 0.437768
LNT PBPRA2882 putative apolipoprotein N-acyltransferasechromosome 1 CDS176083 1554 + 0.454311
LPXA PBPRA2956 putative Acyl-UDP-N-acetylglucosamine O-acyltransferasechromosome 1 CDS253133 810 - 0.445679
LPXD PBPRA2958 putative UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome 1 CDS254498 1026 - 0.429825
PLU4006 PBPRA2877 hypothetical transglycosylasechromosome 1 CDS171186 639 + 0.435055
RLPB PBPRA2886 hypothetical rare lipoprotein Bchromosome 1 CDS182204 714 + 0.406162
S0169 PBPRA2961 putative membrane-associated Zn-dependent proteasechromosome 1 CDS258588 1362 - 0.436123
SO1638 PBPRA2959 putative outer membrane protein OmpHchromosome 1 CDS255604 576 - 0.387153
STM2988 PBPRA2994 putative membrane-bound lytic murein transglycosylase Achromosome 1 CDS294069 1104 - 0.458333
STY0691 PBPRA2890 putative penicillin-binding protein 2chromosome 1 CDS184968 1944 + 0.444959
TAGF PBPRA2712 hypothetical teichoic acid biosynthesis protein Fchromosome 1 CDS9406 1149 - 0.318538
VP2272 PBPRA2897 hypothetical lipoprotein-34 NlpBchromosome 1 CDS192582 1029 - 0.418853
VV0783 PBPRA2735 putative choline-glycine betaine transporterchromosome 1 CDS34666 1965 - 0.449873
VV0904 PBPRA2892 hypothetical rare lipoprotein Achromosome 1 CDS188030 906 + 0.410596
VV10255 PBPRA2847 hypothetical outer membrane lipoprotein LolBchromosome 1 CDS161122 672 + 0.389881
VV1128 PBPRA2722 hypothetical HlyD family secretion proteinchromosome 1 CDS23912 1203 - 0.43724
VV21143 PBPRA2790 putative outer membrane proteinchromosome 1 CDS99596 1029 - 0.436346
WS2061 PBPRA2711 hypothetical polysaccharide biosynthesis proteinchromosome 1 CDS8116 1014 - 0.374753
Y3127 PBPRA2960 putative surface antigenchromosome 1 CDS256133 2418 - 0.418941
YPO1320 PBPRA2893 putative D-alanyl-D-alanine carboxypeptidasechromosome 1 CDS189087 1176 + 0.396259