Gene list
Applied filters:
COG category: Cell wall/membrane biogenesis
Genomic element: chromosome
Number of genes found: 158
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Jannaschia sp. CCS1, CCS1 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Jann_0190 | MltA | chromosome | CDS | 182851 | 1017 | - | 0.59587 |
NA | Jann_0218 | UTP-glucose-1-phosphate uridylyltransferase | chromosome | CDS | 212950 | 894 | + | 0.565996 |
NA | Jann_3257 | Type I secretion outer membrane protein, TolC | chromosome | CDS | 3307581 | 1389 | - | 0.648668 |
NA | Jann_3431 | Small GTP-binding protein domain | chromosome | CDS | 3477854 | 1800 | + | 0.621111 |
NA | Jann_2527 | MscS Mechanosensitive ion channel | chromosome | CDS | 2525584 | 1701 | + | 0.621399 |
NA | Jann_2197 | secretion protein HlyD | chromosome | CDS | 2206290 | 1341 | - | 0.64877 |
NA | Jann_4064 | Nucleotidyl transferase | chromosome | CDS | 4169061 | 681 | + | 0.654919 |
NA | Jann_0033 | dihydrodipicolinate synthase | chromosome | CDS | 30186 | 876 | - | 0.61758 |
NA | Jann_1002 | Lytic transglycosylase, catalytic | chromosome | CDS | 959842 | 816 | + | 0.664216 |
NA | Jann_3319 | glycosyl transferase, family 51 | chromosome | CDS | 3372677 | 657 | + | 0.668189 |
NA | Jann_3316 | Lipoprotein releasing system, transmembrane protein, LolC/E family | chromosome | CDS | 3370296 | 1386 | - | 0.660173 |
NA | Jann_0393 | NAD-dependent epimerase/dehydratase | chromosome | CDS | 396206 | 636 | + | 0.600629 |
NA | Jann_1482 | glycosyl transferase, family 39 | chromosome | CDS | 1452752 | 1644 | - | 0.643552 |
NA | Jann_1278 | Serine-type D-Ala-D-Ala carboxypeptidase | chromosome | CDS | 1238527 | 1197 | - | 0.645781 |
NA | Jann_0126 | NAD-dependent epimerase/dehydratase | chromosome | CDS | 116097 | 864 | - | 0.628472 |
NA | Jann_1360 | Glutamine-fructose-6-phosphate transaminase (isomerizing) | chromosome | CDS | 1324072 | 1032 | + | 0.629845 |
NA | Jann_0263 | Penicillin-binding protein 1C | chromosome | CDS | 265121 | 2040 | - | 0.64902 |
NA | Jann_3415 | conserved hypothetical protein | chromosome | CDS | 3463025 | 609 | - | 0.684729 |
NA | Jann_2722 | hypothetical protein | chromosome | CDS | 2729900 | 3297 | + | 0.67152 |
NA | Jann_0077 | NAD-dependent epimerase/dehydratase | chromosome | CDS | 70578 | 999 | - | 0.601602 |
NA | Jann_3656 | ABC transporter related | chromosome | CDS | 3729649 | 660 | + | 0.563636 |
NA | Jann_1408 | Muconate cycloisomerase | chromosome | CDS | 1377568 | 1116 | + | 0.644265 |
NA | Jann_3037 | polysaccharide export protein | chromosome | CDS | 3062843 | 1098 | + | 0.635701 |
NA | Jann_2749 | UDP-3-0-acyl N-acetylglucosamine deacetylase | chromosome | CDS | 2764357 | 918 | - | 0.619826 |
NA | Jann_2453 | surface antigen (D15) | chromosome | CDS | 2444739 | 2319 | - | 0.623545 |
NA | Jann_0429 | Twin-arginine translocation pathway signal | chromosome | CDS | 434311 | 612 | + | 0.606209 |
NA | Jann_3999 | Peptidoglycan-binding domain 1 | chromosome | CDS | 4102788 | 1707 | - | 0.680726 |
NA | Jann_2448 | lipid-A-disaccharide synthase | chromosome | CDS | 2440844 | 1155 | - | 0.657143 |
NA | Jann_2764 | phospho-N-acetylmuramoyl-pentapeptide-transferase | chromosome | CDS | 2778864 | 1080 | - | 0.600926 |
NA | Jann_0705 | apolipoprotein N-acyltransferase | chromosome | CDS | 676647 | 1464 | + | 0.660519 |
NA | Jann_1310 | secretion protein HlyD | chromosome | CDS | 1269649 | 1140 | + | 0.614912 |
NA | Jann_0344 | murein endopeptidase | chromosome | CDS | 349068 | 903 | + | 0.624585 |
NA | Jann_0076 | UDP-glucose 6-dehydrogenase | chromosome | CDS | 69258 | 1305 | - | 0.618391 |
NA | Jann_2459 | NAD-dependent epimerase/dehydratase | chromosome | CDS | 2452667 | 1029 | - | 0.644315 |
NA | Jann_3826 | Lipocalin-like | chromosome | CDS | 3918617 | 597 | + | 0.664992 |
NA | Jann_1453 | dihydrodipicolinate synthetase | chromosome | CDS | 1423491 | 954 | + | 0.601677 |
NA | Jann_3843 | dTDP-glucose 4,6-dehydratase | chromosome | CDS | 3938395 | 1041 | - | 0.614793 |
NA | Jann_3748 | dihydrodipicolinate synthetase | chromosome | CDS | 3830192 | 864 | - | 0.634259 |
NA | Jann_1123 | DegT/DnrJ/EryC1/StrS aminotransferase | chromosome | CDS | 1082832 | 1203 | - | 0.646717 |
NA | Jann_0345 | hypothetical protein | chromosome | CDS | 350095 | 621 | + | 0.58132 |
NA | Jann_0698 | OmpA/MotB | chromosome | CDS | 671646 | 588 | + | 0.644558 |
NA | Jann_3659 | MscS Mechanosensitive ion channel | chromosome | CDS | 3732929 | 1320 | + | 0.631061 |
NA | Jann_2729 | cell wall hydrolase, SleB | chromosome | CDS | 2740021 | 690 | - | 0.607246 |
NA | Jann_3185 | UDP-N-acetylglucosamine diphosphorylase | chromosome | CDS | 3226484 | 1365 | + | 0.643956 |
NA | Jann_0214 | ABC transporter, permease protein | chromosome | CDS | 209068 | 822 | - | 0.571776 |
NA | Jann_0309 | glycosyl transferase, group 1 | chromosome | CDS | 316591 | 1044 | + | 0.624521 |
NA | Jann_2766 | UDP-N-acetylmuramyl-tripeptide synthetases | chromosome | CDS | 2781362 | 1473 | - | 0.622539 |
NA | Jann_2536 | N-acetylmuramoyl-L-alanine amidase | chromosome | CDS | 2537283 | 1206 | - | 0.660862 |
NA | Jann_3262 | hypothetical protein | chromosome | CDS | 3314139 | 1845 | + | 0.605962 |
NA | Jann_1593 | BCCT transporter | chromosome | CDS | 1574118 | 1806 | - | 0.60742 |
NA | Jann_2554 | hypothetical protein | chromosome | CDS | 2555553 | 513 | - | 0.664717 |
NA | Jann_1739 | alanine racemase | chromosome | CDS | 1731022 | 1029 | - | 0.661808 |
NA | Jann_0996 | OmpA/MotB | chromosome | CDS | 954941 | 654 | - | 0.634557 |
NA | Jann_3333 | prolipoprotein diacylglyceryl transferase | chromosome | CDS | 3383141 | 930 | + | 0.63871 |
NA | Jann_0105 | NLP/P60 | chromosome | CDS | 95737 | 837 | - | 0.618877 |
NA | Jann_0201 | methyltransferase GidB | chromosome | CDS | 193420 | 636 | + | 0.522013 |
NA | Jann_2104 | mandelate racemase/muconate lactonizing enzyme | chromosome | CDS | 2112790 | 1296 | + | 0.611883 |
NA | Jann_3841 | glucose-1-phosphate thymidylyltransferase | chromosome | CDS | 3936566 | 873 | - | 0.609393 |
NA | Jann_3169 | Peptidoglycan-binding domain 1 | chromosome | CDS | 3208358 | 696 | + | 0.614943 |
NA | Jann_0819 | Cytidyltransferase-related | chromosome | CDS | 776536 | 564 | + | 0.574468 |
NA | Jann_0099 | hypothetical protein | chromosome | CDS | 92541 | 336 | + | 0.610119 |
NA | Jann_3418 | Capsule polysaccharide biosynthesis | chromosome | CDS | 3464740 | 1290 | + | 0.644961 |
NA | Jann_1886 | Lytic transglycosylase, catalytic | chromosome | CDS | 1876744 | 570 | + | 0.663158 |
NA | Jann_3199 | glucans biosynthesis glucosyltransferase H, putative | chromosome | CDS | 3238882 | 1878 | - | 0.644302 |
NA | Jann_4055 | Peptidoglycan glycosyltransferase | chromosome | CDS | 4158783 | 2235 | - | 0.654586 |
NA | Jann_2454 | Peptidase M50, putative membrane-associated zinc metallopeptidase | chromosome | CDS | 2447635 | 1332 | - | 0.637387 |
NA | Jann_3914 | OmpA/MotB | chromosome | CDS | 4010986 | 1977 | + | 0.651492 |
NA | Jann_2211 | hypothetical protein | chromosome | CDS | 2218052 | 1137 | + | 0.620932 |
NA | Jann_1667 | OmpA/MotB | chromosome | CDS | 1651403 | 660 | - | 0.681818 |
NA | Jann_0529 | Dihydrokaempferol 4-reductase | chromosome | CDS | 518690 | 999 | - | 0.62963 |
NA | Jann_0824 | glycosyl transferase, family 25 | chromosome | CDS | 780574 | 831 | + | 0.632972 |
NA | Jann_1316 | secretion protein HlyD | chromosome | CDS | 1279946 | 1506 | - | 0.622178 |
NA | Jann_3419 | polysaccharide export protein | chromosome | CDS | 3466133 | 1155 | + | 0.64329 |
NA | Jann_0015 | MscS Mechanosensitive ion channel | chromosome | CDS | 13929 | 864 | - | 0.586806 |
NA | Jann_1255 | Peptidoglycan-binding domain 1 | chromosome | CDS | 1209776 | 1497 | + | 0.679359 |
NA | Jann_0413 | hypothetical protein | chromosome | CDS | 416655 | 1011 | + | 0.607319 |
NA | Jann_1665 | mandelate racemase/muconate lactonizing enzyme | chromosome | CDS | 1649217 | 1221 | + | 0.65602 |
NA | Jann_0219 | glycosyl transferase, group 1 | chromosome | CDS | 213853 | 1248 | + | 0.604968 |
NA | Jann_3847 | glycosyl transferase, group 1 | chromosome | CDS | 3942197 | 1083 | - | 0.619575 |
NA | Jann_4205 | flagellar protein FlgJ, putative | chromosome | CDS | 4309966 | 303 | - | 0.574257 |
NA | Jann_2450 | acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase | chromosome | CDS | 2442767 | 807 | - | 0.641883 |
NA | Jann_3388 | GCN5-related N-acetyltransferase | chromosome | CDS | 3441117 | 471 | + | 0.643312 |
NA | Jann_2767 | Peptidoglycan glycosyltransferase | chromosome | CDS | 2782847 | 1782 | - | 0.629068 |
NA | Jann_0246 | 3-beta hydroxysteroid dehydrogenase/isomerase | chromosome | CDS | 242686 | 984 | + | 0.618902 |
NA | Jann_3186 | glucosamine--fructose-6-phosphate aminotransferase, isomerizing | chromosome | CDS | 3227852 | 1809 | + | 0.630735 |
NA | Jann_1990 | Cyclopropane-fatty-acyl-phospholipid synthase | chromosome | CDS | 1989500 | 1212 | + | 0.588284 |
NA | Jann_3657 | Capsule polysaccharide export protein-like | chromosome | CDS | 3730286 | 1773 | + | 0.632826 |
NA | Jann_3658 | 2-dehydro-3-deoxyphosphooctonate aldolase | chromosome | CDS | 3732099 | 834 | + | 0.627098 |
NA | Jann_0034 | Lytic transglycosylase, catalytic | chromosome | CDS | 31209 | 1950 | + | 0.638974 |
NA | Jann_2823 | MltA-interacting MipA | chromosome | CDS | 2838367 | 792 | - | 0.660354 |
NA | Jann_0828 | hypothetical protein | chromosome | CDS | 783456 | 402 | + | 0.636816 |
NA | Jann_3270 | hypothetical protein | chromosome | CDS | 3324666 | 1185 | + | 0.662447 |
NA | Jann_3985 | Twin-arginine translocation pathway signal | chromosome | CDS | 4090465 | 510 | + | 0.641176 |
NA | Jann_0273 | NAD-dependent epimerase/dehydratase | chromosome | CDS | 279820 | 849 | - | 0.634865 |
NA | Jann_3497 | 3-beta hydroxysteroid dehydrogenase/isomerase | chromosome | CDS | 3553226 | 828 | + | 0.621981 |
NA | Jann_3548 | short-chain dehydrogenase/reductase SDR | chromosome | CDS | 3611201 | 837 | + | 0.565113 |
NA | Jann_0434 | Type I secretion membrane fusion protein, HlyD | chromosome | CDS | 439065 | 1308 | + | 0.642966 |
NA | Jann_4113 | NAD-dependent epimerase/dehydratase | chromosome | CDS | 4221342 | 933 | - | 0.669882 |
NA | Jann_0276 | Monofunctional biosynthetic peptidoglycan transglycosylase | chromosome | CDS | 282413 | 720 | - | 0.6375 |
NA | Jann_3183 | DegT/DnrJ/EryC1/StrS aminotransferase | chromosome | CDS | 3224414 | 1203 | - | 0.625104 |
NA | Jann_4043 | lipoprotein signal peptidase | chromosome | CDS | 4146719 | 474 | + | 0.616034 |
NA | Jann_2886 | UDP-N-acetylglucosamine1-carboxyvinyltransferase | chromosome | CDS | 2906103 | 1263 | - | 0.649248 |
NA | Jann_0931 | hypothetical protein | chromosome | CDS | 886915 | 318 | - | 0.58805 |
NA | Jann_1645 | Putative phage cell wall peptidase, NlpC/P60 | chromosome | CDS | 1627946 | 435 | + | 0.641379 |
NA | Jann_0281 | OmpA/MotB | chromosome | CDS | 287215 | 948 | - | 0.640295 |
NA | Jann_3899 | secretion protein HlyD | chromosome | CDS | 3997507 | 1458 | - | 0.657064 |
NA | Jann_2338 | Glutamate racemase | chromosome | CDS | 2345083 | 813 | - | 0.659287 |
NA | Jann_0078 | glycosyl transferase, group 1 | chromosome | CDS | 71852 | 1299 | - | 0.602771 |
NA | Jann_1158 | conserved hypothetical protein | chromosome | CDS | 1121833 | 822 | + | 0.608272 |
NA | Jann_0357 | Lytic murein transglycosylase | chromosome | CDS | 361969 | 1545 | + | 0.666019 |
NA | Jann_1868 | hypothetical protein | chromosome | CDS | 1855524 | 606 | + | 0.679868 |
NA | Jann_1994 | MscS Mechanosensitive ion channel | chromosome | CDS | 1993442 | 2391 | + | 0.614387 |
NA | Jann_1017 | Lytic transglycosylase, catalytic | chromosome | CDS | 971648 | 498 | + | 0.664659 |
NA | Jann_3648 | Peptidoglycan glycosyltransferase | chromosome | CDS | 3721212 | 1950 | + | 0.646667 |
NA | Jann_0836 | conserved hypothetical protein | chromosome | CDS | 791371 | 963 | + | 0.600208 |
NA | Jann_3844 | dTDP-4-dehydrorhamnose 3,5-epimerase | chromosome | CDS | 3939432 | 648 | - | 0.603395 |
NA | Jann_2029 | glycosyl transferase, group 1 | chromosome | CDS | 2034587 | 849 | + | 0.541814 |
NA | Jann_2763 | UDP-N-acetylmuramoylalanine--D-glutamateligase | chromosome | CDS | 2777317 | 1383 | - | 0.644252 |
NA | Jann_0216 | 3-deoxy-manno-octulosonate cytidylyltransferase | chromosome | CDS | 210834 | 798 | + | 0.639098 |
NA | Jann_2769 | methyltransferase | chromosome | CDS | 2784986 | 984 | - | 0.614837 |
NA | Jann_4114 | dihydrodipicolinate synthetase | chromosome | CDS | 4222271 | 900 | - | 0.63 |
NA | Jann_3849 | Serine-type D-Ala-D-Ala carboxypeptidase | chromosome | CDS | 3944393 | 1407 | + | 0.66027 |
NA | Jann_0400 | Three-deoxy-D-manno-octulosonic-acidtransferase-like | chromosome | CDS | 401998 | 1293 | - | 0.640371 |
NA | Jann_0245 | surface antigen (D15) | chromosome | CDS | 240739 | 1797 | - | 0.628269 |
NA | Jann_4072 | GCN5-related N-acetyltransferase | chromosome | CDS | 4179162 | 480 | - | 0.6375 |
NA | Jann_3842 | dTDP-4-dehydrorhamnose reductase | chromosome | CDS | 3937553 | 846 | - | 0.661939 |
NA | Jann_3984 | beta-Ig-H3/fasciclin | chromosome | CDS | 4089877 | 507 | + | 0.646943 |
NA | Jann_0381 | carboxyl-terminal protease | chromosome | CDS | 387045 | 1326 | + | 0.621418 |
NA | Jann_3182 | outer membrane protein, putative | chromosome | CDS | 3223748 | 591 | + | 0.609137 |
NA | Jann_0365 | mandelate racemase/muconate lactonizing enzyme | chromosome | CDS | 368087 | 954 | - | 0.644654 |
NA | Jann_0976 | OmpA/MotB | chromosome | CDS | 932174 | 519 | + | 0.641618 |
NA | Jann_2765 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase | chromosome | CDS | 2779944 | 1422 | - | 0.646273 |
NA | Jann_3646 | rod shape-determining protein MreC | chromosome | CDS | 3719744 | 936 | + | 0.636752 |
NA | Jann_2753 | D-alanine--D-alanine ligase | chromosome | CDS | 2769670 | 951 | - | 0.637224 |
NA | Jann_0399 | tetraacyldisaccharide 4'-kinase | chromosome | CDS | 401012 | 987 | - | 0.679838 |
NA | Jann_1065 | peptidase M23B | chromosome | CDS | 1024549 | 1122 | - | 0.69697 |
NA | Jann_0507 | hydroxymethylbutenyl pyrophosphate reductase | chromosome | CDS | 502885 | 960 | - | 0.621875 |
NA | Jann_1016 | AsmA | chromosome | CDS | 969681 | 1971 | + | 0.676814 |
NA | Jann_2452 | conserved hypothetical protein | chromosome | CDS | 2444134 | 600 | - | 0.663333 |
NA | Jann_2868 | Lytic murein transglycosylase | chromosome | CDS | 2889862 | 1278 | + | 0.666667 |
NA | Jann_2534 | Penicillin-binding protein 1A | chromosome | CDS | 2534018 | 2565 | - | 0.644055 |
NA | Jann_0948 | hypothetical protein | chromosome | CDS | 906028 | 987 | + | 0.593718 |
NA | Jann_3420 | Capsule polysaccharide biosynthesis | chromosome | CDS | 3467291 | 2052 | + | 0.680799 |
NA | Jann_1484 | glycosyl transferase, family 2 | chromosome | CDS | 1454724 | 753 | - | 0.636122 |
NA | Jann_2760 | Undecaprenyldiphospho-muramoylpentapeptidebeta-N- | chromosome | CDS | 2774392 | 1104 | - | 0.672101 |
NA | Jann_0371 | Lytic murein transglycosylase | chromosome | CDS | 373855 | 1173 | + | 0.658141 |
NA | Jann_2530 | protein of unknown function DUF583 | chromosome | CDS | 2529872 | 498 | + | 0.654619 |
NA | Jann_3631 | D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase | chromosome | CDS | 3705325 | 1482 | + | 0.656545 |
NA | Jann_0136 | MscS Mechanosensitive ion channel | chromosome | CDS | 126057 | 1356 | + | 0.600295 |
NA | Jann_2127 | TonB-like | chromosome | CDS | 2136065 | 993 | - | 0.688822 |
NA | Jann_2754 | UDP-N-acetylenolpyruvoylglucosamine reductase | chromosome | CDS | 2770870 | 930 | - | 0.630108 |
NA | Jann_0457 | large conductance mechanosensitive channel protein | chromosome | CDS | 458997 | 492 | + | 0.554878 |
NA | Jann_2041 | conserved hypothetical protein | chromosome | CDS | 2046189 | 507 | - | 0.605523 |
NA | Jann_2734 | Peptidoglycan-binding domain 1 | chromosome | CDS | 2747378 | 1758 | + | 0.642207 |
NA | Jann_2759 | UDP-N-acetylmuramate--alanine ligase | chromosome | CDS | 2772964 | 1425 | - | 0.640702 |
NA | Jann_1812 | organic solvent tolerance protein, putative | chromosome | CDS | 1800779 | 2148 | - | 0.632216 |
NA | Jann_1485 | dihydrodipicolinate synthetase | chromosome | CDS | 1455559 | 909 | - | 0.584158 |
NA | Jann_2146 | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase | chromosome | CDS | 2154005 | 1098 | + | 0.656648 |