Gene list
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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome 3
Number of genes found: 60
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Burkholderia sp. 383, 383 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Bcep18194_C7393 | Glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome 3 | CDS | 1003003 | 1098 | - | 0.691257 |
NA | Bcep18194_C7659 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 1303571 | 1023 | + | 0.72434 |
NA | Bcep18194_C7396 | Capsule polysaccharide biosynthesis | SubName: Full=Capsule polysaccharide biosynthesis; | chromosome 3 | CDS | 1005570 | 1200 | - | 0.655 |
NA | Bcep18194_C7602 | dTDP-4-dehydrorhamnose reductase | SubName: Full=dTDP-4-dehydrorhamnose reductase; EC=1.1.1.133; | chromosome 3 | CDS | 1237900 | 945 | - | 0.715344 |
NA | Bcep18194_C7660 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 1304798 | 1101 | + | 0.633061 |
NA | Bcep18194_C7454 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 1068174 | 1152 | + | 0.621528 |
NA | Bcep18194_C6985 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 3 | CDS | 540999 | 447 | + | 0.63311 |
NA | Bcep18194_C6556 | RND efflux system, outer membrane lipoprotein, NodT family | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT family; | chromosome 3 | CDS | 41853 | 1485 | + | 0.619529 |
NA | Bcep18194_C7687 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 3 | CDS | 1334385 | 513 | - | 0.62963 |
NA | Bcep18194_C6666 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 180021 | 1122 | - | 0.589127 |
NA | Bcep18194_C7270 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome 3 | CDS | 859293 | 636 | + | 0.646226 |
NA | Bcep18194_C7282 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 872851 | 1182 | + | 0.639594 |
NA | Bcep18194_C7084 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 646939 | 1185 | - | 0.648945 |
NA | Bcep18194_C7566 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 1196450 | 1218 | - | 0.674877 |
NA | Bcep18194_C6609 | RND efflux system, outer membrane lipoprotein, NodT family | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT family; | chromosome 3 | CDS | 109469 | 1533 | + | 0.677104 |
NA | Bcep18194_C6581 | Cyclopropane-fatty-acyl-phospholipid synthase | SubName: Full=Cyclopropane-fatty-acyl-phospholipid synthase; EC=2.1.1.79; | chromosome 3 | CDS | 66763 | 1230 | - | 0.682114 |
NA | Bcep18194_C7685 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 1332410 | 1173 | + | 0.669224 |
NA | Bcep18194_C6853 | RND efflux system, outer membrane lipoprotein, NodT family | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT family; | chromosome 3 | CDS | 395766 | 1476 | - | 0.7229 |
NA | Bcep18194_C7385 | UTP--glucose-1-phosphate uridylyltransferase | SubName: Full=UDP-glucose pyrophosphorylase; EC=2.7.7.9; | chromosome 3 | CDS | 995580 | 885 | + | 0.625989 |
NA | Bcep18194_C7242 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 831284 | 1119 | - | 0.660411 |
NA | Bcep18194_C6734 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 255887 | 1185 | - | 0.654008 |
NA | Bcep18194_C6937 | Mandelate racemase/muconate lactonizing enzyme | SubName: Full=Galactonate dehydratase; EC=4.2.1.6; | chromosome 3 | CDS | 492821 | 1146 | + | 0.684991 |
NA | Bcep18194_C6882 | NmrA-like | SubName: Full=NmrA-like protein; | chromosome 3 | CDS | 435068 | 831 | + | 0.725632 |
NA | Bcep18194_C7655 | Dihydrodipicolinate synthetase | SubName: Full=Dihydrodipicolinate synthetase; EC=4.3.3.7; | chromosome 3 | CDS | 1300023 | 924 | - | 0.712121 |
NA | Bcep18194_C6688 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 3 | CDS | 204233 | 786 | - | 0.679389 |
NA | Bcep18194_C7210 | Glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome 3 | CDS | 798949 | 1047 | + | 0.661891 |
NA | Bcep18194_C6584 | lipocalin-like protein | SubName: Full=Lipocalin-like protein; | chromosome 3 | CDS | 70240 | 609 | - | 0.706076 |
NA | Bcep18194_C6571 | outer membrane protein, OmpA/MotB family | SubName: Full=Outer membrane protein, OmpA/MotB family; | chromosome 3 | CDS | 56859 | 504 | - | 0.581349 |
NA | Bcep18194_C7455 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 1069601 | 1167 | - | 0.62982 |
NA | Bcep18194_C7044 | Mandelate racemase/muconate lactonizing enzyme | SubName: Full=Muconate cycloisomerase; EC=5.5.1.1; | chromosome 3 | CDS | 611576 | 1137 | + | 0.674582 |
NA | Bcep18194_C7326 | TonB-like protein | SubName: Full=Outer membrane transport energization protein TonB; | chromosome 3 | CDS | 921567 | 693 | - | 0.691198 |
NA | Bcep18194_C7621 | Dihydrodipicolinate synthetase | SubName: Full=Dihydrodipicolinate synthetase; EC=4.3.3.7; | chromosome 3 | CDS | 1267134 | 945 | - | 0.674074 |
NA | Bcep18194_C7373 | outer membrane protein, OmpA/MotB family | SubName: Full=Outer membrane protein, OmpA/MotB family; | chromosome 3 | CDS | 980195 | 663 | - | 0.665158 |
NA | Bcep18194_C6530 | outer membrane protein, (porin)-like | SubName: Full=Outer membrane protein, (Porin)-like protein; | chromosome 3 | CDS | 7308 | 1254 | - | 0.69059 |
NA | Bcep18194_C6825 | Secretion protein HlyD family | SubName: Full=Secretion protein HlyD family; | chromosome 3 | CDS | 360772 | 1158 | - | 0.702936 |
NA | Bcep18194_C6577 | Beta-Ig-H3/fasciclin repeat containing protein | SubName: Full=Beta-Ig-H3/fasciclin repeat containing protein; | chromosome 3 | CDS | 63515 | 555 | + | 0.583784 |
NA | Bcep18194_C7400 | Polysaccharide export protein | SubName: Full=Polysaccharide export protein; | chromosome 3 | CDS | 1010803 | 1176 | - | 0.676871 |
NA | Bcep18194_C6689 | protein of unknown function DUF214 | SubName: Full=Uncharacterized protein; | chromosome 3 | CDS | 205034 | 1398 | - | 0.701717 |
NA | Bcep18194_C6599 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 3 | CDS | 97139 | 1068 | + | 0.529963 |
NA | Bcep18194_C6823 | RND efflux system, outer membrane lipoprotein, NodT family | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT family; | chromosome 3 | CDS | 356161 | 1443 | - | 0.699931 |
NA | Bcep18194_C7551 | ABC glycine betaine/choline-binding transporter, periplasmic ligand binding protein | SubName: Full=ABC glycine betaine/choline-binding transporter, periplasmic ligand binding protein; | chromosome 3 | CDS | 1178642 | 912 | + | 0.663377 |
NA | Bcep18194_C7413 | ABC efflux pump, inner membrane subunit | SubName: Full=ABC efflux pump, inner membrane subunit; | chromosome 3 | CDS | 1025664 | 1218 | + | 0.689655 |
NA | Bcep18194_C7398 | Exopolysaccharide transport protein | SubName: Full=Exopolysaccharide transport protein; | chromosome 3 | CDS | 1008082 | 2238 | - | 0.66622 |
NA | Bcep18194_C7394 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 3 | CDS | 1004097 | 945 | - | 0.666667 |
NA | Bcep18194_C7636 | LrgB-like protein | SubName: Full=LrgB-like protein; | chromosome 3 | CDS | 1282330 | 735 | - | 0.70068 |
NA | Bcep18194_C7462 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 1076150 | 1083 | - | 0.600185 |
NA | Bcep18194_C6585 | Cyclopropane-fatty-acyl-phospholipid synthase | SubName: Full=Cyclopropane-fatty-acyl-phospholipid synthase; EC=2.1.1.79; | chromosome 3 | CDS | 70857 | 1101 | - | 0.682107 |
NA | Bcep18194_C7529 | Phospholipase C | SubName: Full=Phospholipase C; EC=3.1.4.3; | chromosome 3 | CDS | 1147314 | 2142 | - | 0.68394 |
NA | Bcep18194_C7217 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome 3 | CDS | 806281 | 510 | - | 0.672549 |
NA | Bcep18194_C6767 | outer membrane protein (porin)-like | SubName: Full=Outer membrane protein (Porin)-like protein; | chromosome 3 | CDS | 287205 | 1113 | + | 0.609164 |
NA | Bcep18194_C7725 | RND efflux system, outer membrane lipoprotein, NodT family | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT family; | chromosome 3 | CDS | 1377334 | 1500 | + | 0.712667 |
NA | Bcep18194_C7390 | 3-deoxy-D-manno-octulosonatecytidylyltransferase | RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase 2; EC=2.7.7.38; AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid synthase 2; Short=CKS 2; Short=CMP-KDO synthase 2; | chromosome 3 | CDS | 1000746 | 798 | - | 0.689223 |
NA | Bcep18194_C7401 | Undecaprenyl-phosphategalactosephosphotransferase | SubName: Full=Undecaprenyl-phosphate galactosephosphotransferase; EC=2.7.8.6; | chromosome 3 | CDS | 1012148 | 1089 | - | 0.653811 |
NA | Bcep18194_C7310 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 903847 | 1110 | + | 0.637838 |
NA | Bcep18194_C6607 | Secretion protein, HlyD family | SubName: Full=Secretion protein, HlyD family; | chromosome 3 | CDS | 105003 | 1257 | + | 0.675418 |
NA | Bcep18194_C6593 | outer membrane protein, OmpA/MotB family | SubName: Full=Outer membrane protein, OmpA/MotB family; | chromosome 3 | CDS | 85335 | 708 | + | 0.576271 |
NA | Bcep18194_C7392 | 2-dehydro-3-deoxyphosphooctonate aldolase | RecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; EC=2.5.1.55; AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthase; AltName: Full=KDO-8-phosphate synthase; AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase; | chromosome 3 | CDS | 1002075 | 951 | - | 0.662461 |
NA | Bcep18194_C7542 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 3 | CDS | 1167371 | 891 | - | 0.54321 |
NA | Bcep18194_C6870 | D-alanine--D-alanine ligase | RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; | chromosome 3 | CDS | 416639 | 1029 | - | 0.628766 |
NA | Bcep18194_C6941 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); | chromosome 3 | CDS | 497394 | 1122 | + | 0.668449 |