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2024-05-26 03:07:00

Gene list

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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome 1

Number of genes found: 146

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RSP_1380 conserved hypothetical proteinchromosome 1 CDS3158690 816 + 0.698529
NA RSP_2543 Peptidoglycan-binding LysM (possible peptidase)chromosome 1 CDS1186682 1200 - 0.725
NA RSP_1118 group 1 glycosyltransferasechromosome 1 CDS2879295 1278 + 0.674491
NA RSP_2478 conserved hypothetical proteinchromosome 1 CDS1115999 441 + 0.68254
NA RSP_1894 conserved hypothetical proteinchromosome 1 CDS490925 390 + 0.671795
NA RSP_0514 dTDP-glucose 4,6-dehydratase proteinchromosome 1 CDS2250807 1014 - 0.704142
NA RSP_0251 Outer membrane efflux proteinchromosome 1 CDS1974662 1401 - 0.692363
NA RSP_0461 multidrug/cation efflux pump, membrane fusion protein (MFP) familychromosome 1 CDS2196758 954 - 0.72956
NA RSP_2152 putative ceramide glucosyltransferasechromosome 1 CDS754750 1089 - 0.75023
NA RSP_1524 Nucleotidyltransferase family proteinchromosome 1 CDS110754 666 + 0.713213
NA RSP_0520 NAD-dependent dehydratase/epimerasechromosome 1 CDS2258269 1107 - 0.695574
NA RSP_2163 lytic murein transglycosylase, putativechromosome 1 CDS765995 804 + 0.682836
NA RSP_1447 possible glucosamine--fructose-6-phosphate aminotransferase (isomerizing)chromosome 1 CDS29463 1005 + 0.704478
NA RSP_0633 UDP-N-acetylglucosamine enolpyruvyl transferasechromosome 1 CDS2369144 1269 - 0.700552
NA RSP_1539 Glycosyl transferase, family 2chromosome 1 CDS128370 1008 - 0.689484
NA RSP_1240 putative membrane-bound lytic murein transglycosylase A transmembrane proteinchromosome 1 CDS3009814 1026 + 0.716374
NA RSP_1319 possible invasion proteinchromosome 1 CDS3091328 681 + 0.681351
NA RSP_2854 Cation/multidrug efflux pump, Membrane fusion protein (MFP) familychromosome 1 CDS1449545 1161 - 0.73385
NA RSP_1515 Hypothetical protein of glycosyl transferase familychromosome 1 CDS102475 957 + 0.641588
NA RSP_6204 conserved hypothetical proteinchromosome 1 CDS1362690 693 + 0.743146
NA RSP_0160 NAD-dependent epimerase/dehydratase family proteinchromosome 1 CDS1875827 1038 - 0.662813
NA RSP_2148 Small Conductance Mechanosensitive Ion Channelchromosome 1 CDS750104 2544 + 0.703223
NA RSP_1145 Peptidoglycan transglycosylasechromosome 1 CDS2905727 741 - 0.699055
NA RSP_1880 hypothetical proteinchromosome 1 CDS478176 1560 + 0.724359
NA RSP_1794 putative lytic transglycosylasechromosome 1 CDS380074 615 + 0.658537
NA RSP_0072 possible invasion proteinchromosome 1 CDS1780189 798 - 0.736842
NA RSP_1182 putative outer membrane proteinchromosome 1 CDS2951271 1824 + 0.707237
NA RSP_0518 putative glycosyltransferase proteinchromosome 1 CDS2255157 1101 - 0.739328
NA RSP_0926 OmpA/MotB family proteinchromosome 1 CDS2674975 933 + 0.733119
NA RSP_0519 NAD-dependent epimerase/dehydratasechromosome 1 CDS2256254 2019 - 0.706786
NA RSP_1116 glycosyltransferasechromosome 1 CDS2875880 1242 + 0.716586
NA RSP_0881 Putative soluble lytic transglycosylasechromosome 1 CDS2630264 1962 - 0.748216
NA RSP_0650 Probable transglycosylasechromosome 1 CDS2388918 453 - 0.668874
NA RSP_0784 putative acetyltransferase, GNAT familychromosome 1 CDS2528862 477 + 0.69392
NA RSP_1987 hypothetical proteinchromosome 1 CDS582976 597 + 0.716918
NA RSP_0421 hypothetical proteinchromosome 1 CDS2153636 501 - 0.752495
NA RSP_2747 possible glycosyltransferasechromosome 1 CDS1396918 1329 - 0.710308
NA RSP_0688 Probable penicillin-binding proteinchromosome 1 CDS2430748 1506 + 0.687915
NA RSP_0893 RTX secretion protein D, HlyD familychromosome 1 CDS2644268 1302 + 0.688172
NA RSP_2802 multidrug/cation efflux pump, membrane fusion protein subunitchromosome 1 CDS1517118 1176 - 0.692177
NA RSP_0653 UDP-glucose 6-dehydrogenasechromosome 1 CDS2391168 1305 - 0.666667
NA RSP_0550 putative D-alanyl-D-alanine carboxypeptidasechromosome 1 CDS2287395 1068 + 0.683521
NA RSP_1860 conserved hypothetical proteinchromosome 1 CDS458768 723 + 0.723375
NA RSP_2711 putative outer membrane proteinchromosome 1 CDS1360291 2400 + 0.66375
NA RSP_1626 hypothetical proteinchromosome 1 CDS222605 810 - 0.739506
NA RSP_0582 possible penicillin binding proteinchromosome 1 CDS2324005 1458 + 0.740055
NA RSP_0026 Probable epimerase/dehydratasechromosome 1 CDS1727111 1056 - 0.660985
NA RSP_2150 predicted Glycosyl transferase, family 2chromosome 1 CDS753492 714 - 0.743697
NA RSP_0922 Putative TonB proteinchromosome 1 CDS2671499 885 + 0.761582
NA RSP_1334 possible chemotactic signal-response protein CheLchromosome 1 CDS3102508 279 - 0.670251
NA RSP_6038 methyltransferase MraW/YabCchromosome 1 CDS695421 996 + 0.723896
NA RSP_1009 possible outer membrane protein, OmpA familychromosome 1 CDS2767269 1959 + 0.729964
NA RSP_2219 putative lipid A biosynthesis lauroyl acyltransferasechromosome 1 CDS830390 882 - 0.710884
NA RSP_1908 outer membrane protein, OmpA/MotB familychromosome 1 CDS505718 642 - 0.697819
NA RSP_0517 conserved hypothetical proteinchromosome 1 CDS2254046 1110 - 0.705405
NA RSP_1151 NADH-ubiquinone oxidoreductasechromosome 1 CDS2914945 987 - 0.688956
NA RSP_1456 conserved hypothetical proteinchromosome 1 CDS40299 945 + 0.718518
NA RSP_1933 Outer membrane protein, OmpA/MotB familychromosome 1 CDS532399 2106 + 0.7151
NA RSP_2902 Putative organic solvent tolerance proteinchromosome 1 CDS1577933 2145 + 0.692774
NA RSP_1846 hypothetical proteinchromosome 1 CDS437638 354 - 0.700565
NA RSP_1497 Putative outer membrane lipoprotein carrier proteinchromosome 1 CDS83627 639 + 0.666667
NA RSP_1533 putative alginate O-acetyltransferasechromosome 1 CDS121217 1533 - 0.655577
NA RSP_1895 Small-conductance mechanosensitive ion channelchromosome 1 CDS491614 2364 + 0.693316
NA RSP_1457 putative choline kinasechromosome 1 CDS41240 945 + 0.655026
NA RSP_2975 conserved hypothetical proteinchromosome 1 CDS1662744 519 + 0.672447
NA RSP_0333 possible cellulose synthasechromosome 1 CDS2061625 2367 - 0.689903
NA RSP_1409 Beta-Ig-H3/Fasciclinchromosome 1 CDS3185942 471 - 0.679406
NA RSP_1911 possible soluble lytic murein transglycosylasechromosome 1 CDS509868 891 + 0.729517
NA RSP_1355 Glycosyl transferase, family 51chromosome 1 CDS3126043 2025 - 0.750123
NA RSP_0668 OmpA/MotB family proteinchromosome 1 CDS2409516 549 - 0.695811
NA RSP_1084 putative glycosyl transferase, group 1 family proteinchromosome 1 CDS2840745 1218 + 0.711823
NA RSP_0595 hypothetical proteinchromosome 1 CDS2336088 516 - 0.724806
NA RSP_1385 conserved hypothetical proteinchromosome 1 CDS3163866 840 - 0.721429
NA RSP_1769 Mandelate racemase / muconate lactonizing enzymechromosome 1 CDS352401 963 - 0.709242
NA RSP_1033 OmpA family proteinchromosome 1 CDS2796976 687 + 0.710335
NA RSP_2947 Glutamate racemasechromosome 1 CDS1627146 813 - 0.686347
NA RSP_1538 probable glucose-1-phosphate cytidylyltransferasechromosome 1 CDS127361 774 + 0.634367
NA RSP_1190 hypothetical proteinchromosome 1 CDS2963936 834 - 0.743405
NA RSP_2710 Putative membrane-associated zinc metalloproteasechromosome 1 CDS1358559 1335 + 0.683895
NA RSP_1120 protein secretion protein, HlyD family, membrane fusion proteinchromosome 1 CDS2882283 1302 + 0.710445
NA RSP_2224 multidrug efflux pump, membrane fusion protein (MFP) familychromosome 1 CDS837959 1167 - 0.747215
NA RSP_0700 probable glycosyltransferasechromosome 1 CDS2443593 1224 - 0.70098
NA RSP_0652 UDP-glucose 4-epimerasechromosome 1 CDS2390172 987 - 0.68693
NA RSP_2496 hypothetical proteinchromosome 1 CDS1140547 501 + 0.664671
NA RSP_0759 putative capsule polysaccharide exporterchromosome 1 CDS2501868 1137 + 0.691293
DapA RSP_0882 Dihydrodipicolinate synthetasechromosome 1 CDS2632363 888 + 0.686937
LolE RSP_0777 ABC lipoprotein efflux transporter, inner membrane subunit, LolEchromosome 1 CDS2519373 1287 - 0.685315
LspA RSP_1099 signal peptidase IIchromosome 1 CDS2857248 558 - 0.684588
LytB RSP_1666 4-hydroxy-3-methylbut-2-enyl diphosphate reductasechromosome 1 CDS257682 960 - 0.684375
MltB RSP_1125 Membrane bound lytic murein transglycosylase Bchromosome 1 CDS2887930 1254 - 0.716906
MrcB RSP_0887 Glycosyl transferase, family 51chromosome 1 CDS2638379 2496 + 0.699119
SspA RSP_0753 Salt-stress induced outer membrane proteinchromosome 1 CDS2496345 873 - 0.635739
alr RSP_2460 alanine racemasechromosome 1 CDS1100958 1050 - 0.713333
amiC RSP_2979 Probable N-acetylmuramoyl-L-alanine amidasechromosome 1 CDS1668481 1236 - 0.737055
amsA RSP_2006 conserved hypothetical proteinchromosome 1 CDS606221 1983 + 0.740292
cfaS RSP_2144 Cyclopropane-fatty-acyl-phospholipid synthase CfaSchromosome 1 CDS745971 1212 + 0.665842
ctpA RSP_0932 Peptidase family S41chromosome 1 CDS2681206 1347 - 0.682999
ddlA RSP_2111 D-alanine--D-alanine ligasechromosome 1 CDS711623 924 + 0.691558
envA RSP_2115 putative UDP-3-O-acyl N-acetylglucosamine deacetylasechromosome 1 CDS716857 921 + 0.697068
exoA RSP_2563 Glycosyl transferase, family 2chromosome 1 CDS1208336 990 - 0.70101
exoF RSP_2548 Outer membrane polysaccharide export protein, exoFchromosome 1 CDS1191016 1233 + 0.699919
exoM RSP_2562 succinoglycan biosynthesis protein exoMchromosome 1 CDS1207359 981 - 0.691131
exoO RSP_2551 Glycosyl transferase, family 2chromosome 1 CDS1194718 1431 + 0.727463
exoP RSP_2561 putative succinoglycan biosynthesis transport protein ExoPchromosome 1 CDS1204993 2316 - 0.686097
exoQ RSP_2549 putative polysaccharide polymerasechromosome 1 CDS1192424 1290 - 0.694574
exoU RSP_2552 Glycosyl transferase, family 2chromosome 1 CDS1196164 957 - 0.721003
exoY RSP_2547 exopolysaccharide production protein exoYchromosome 1 CDS1190333 612 + 0.699346
flgJ RSP_6093 FlgJchromosome 1 CDS1786429 303 - 0.69967
ftsI RSP_2098 Cell division protein FtsI/penicillin-binding protein 2chromosome 1 CDS696773 1794 + 0.691193
ftsQ RSP_2112 cell division septal protein FtsQchromosome 1 CDS712534 927 + 0.727077
galE-2 RSP_0159 UDP-glucose 4-epimerasechromosome 1 CDS1874842 993 - 0.707956
galU RSP_1159 UDP-glucose pyrophosphatechromosome 1 CDS2921366 894 - 0.631991
gidB RSP_1228 putative GidB, Glucose inhibited division proteinchromosome 1 CDS2999173 621 - 0.624799
glmS RSP_2502 Glucosamine--fructose-6-phosphateaminotransferas echromosome 1 CDS1146147 1812 - 0.689846
glmU RSP_2503 Glucosamine-1-phosphate N-acetyltransferase; UDP-N-acetylglucosamine pyrophosphorylasechromosome 1 CDS1147958 1365 - 0.69304
kdsB RSP_1160 CMP-2-keto-3-deoxyoctulaosonic acid synthetasechromosome 1 CDS2922660 798 - 0.709273
kdtA RSP_2394 putative 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)chromosome 1 CDS1021231 1224 - 0.75
kdtA RSP_1461 Putative 3-deoxy-D-manno-octulosonic-acid transferasechromosome 1 CDS46812 1188 + 0.748317
lepA RSP_2088 GTP-binding elongation factorchromosome 1 CDS681644 1800 - 0.644444
lgt RSP_1580 Prolipoprotein diacylglyceryl transferasechromosome 1 CDS172445 879 - 0.675768
lpsB RSP_1374 putative lipopolysaccharide core biosynthesis mannosyltransferase proteinchromosome 1 CDS3153176 1035 + 0.730435
lpxA RSP_2714 Acyl-(acyl carrier protein))-UDP-N-acetylglucosamine O-acyltransferasechromosome 1 CDS1363966 756 + 0.71164
lpxB RSP_2716 putative lipid-A-disaccharide synthasechromosome 1 CDS1365536 1140 + 0.727193
lpxD RSP_2775 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferasechromosome 1 CDS1423051 1092 + 0.707875
lpxK RSP_1462 Putative Tetraacyldisaccharide-1-P 4'-kinasechromosome 1 CDS47999 999 + 0.745746
mepA RSP_1363 putative murein endopeptidase transmembrane proteinchromosome 1 CDS3141632 885 + 0.710734
mraY RSP_2101 Phospho-N-acetylmuramoyl-pentapeptidetransferasechromosome 1 CDS701603 1083 + 0.658356
mrcA RSP_2978 Penicillin-binding protein 1A (PBP-1a)chromosome 1 CDS1665840 2550 - 0.67451
mreC RSP_2328 Rod shape-determining protein, MreCchromosome 1 CDS951745 903 - 0.694352
mscL RSP_0724 Large-conductance mechanosensitive channelchromosome 1 CDS2468823 441 - 0.630385
murB RSP_2110 UDP-N-acetylenolpyruvoylglucosaminereductase/deh ydrogenasechromosome 1 CDS710657 927 + 0.700108
murC RSP_2108 UDP-N-acetylmuramate-alanine ligasechromosome 1 CDS708980 1413 + 0.686483
murD RSP_2103 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome 1 CDS703796 1398 + 0.706724
murE RSP_2099 UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligasechromosome 1 CDS698581 1488 + 0.737231
murF RSP_2100 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligasechromosome 1 CDS700157 1434 + 0.74198
murG RSP_2107 UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome 1 CDS707889 1095 + 0.725114
ompW RSP_2507 outer membrane proteinchromosome 1 CDS1151976 612 - 0.651961
opgH RSP_0127 Glycosyl transferase, family 2chromosome 1 CDS1840516 1788 + 0.681208
pbpA RSP_2326 Cell division protein FtsIchromosome 1 CDS949270 1947 - 0.691834
rfbC RSP_0024 Putative dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-L-rhamnose synthetase)chromosome 1 CDS1724906 534 + 0.649813
sqdB RSP_2569 sulfolipid (UDP-sulfoquinovose) biosynthesis proteinchromosome 1 CDS1213444 1215 - 0.649383
sqdC RSP_2567 putative sulfolipid biosynthesis proteinchromosome 1 CDS1211807 816 - 0.716912
ugpG RSP_2565 UDPG-pyrophosphorylasechromosome 1 CDS1210513 939 - 0.683706
vacJ RSP_0891 putative lipoproteinchromosome 1 CDS2641537 789 - 0.665399
wcaG RSP_1188 Nucleotide sugar epimerase/dehydratasechromosome 1 CDS2961261 1887 - 0.667727
wcaJ RSP_1189 sugar transferasechromosome 1 CDS2963295 645 - 0.649612