Gene list
Applied filters:
COG category: Cell wall/membrane biogenesis
Genomic element: chromosome I
Number of genes found: 165
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Vibrio vulnificus CMCP6, CMCP6 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | VV10917 | Cell wall-associated hydrolase | chromosome I | CDS | 928717 | 435 | + | 0.549425 |
NA | VV10583 | UDP-N-acetylmuramyl tripeptide synthase | chromosome I | CDS | 598064 | 1509 | - | 0.508284 |
NA | VV11811 | Outer membrane protein OmpK | chromosome I | CDS | 1808153 | 837 | - | 0.424134 |
NA | VV10517 | Prolipoprotein diacylglyceryltransferase | chromosome I | CDS | 516116 | 732 | - | 0.509563 |
NA | VV11970 | VacJ lipoprotein | chromosome I | CDS | 1959107 | 777 | + | 0.491634 |
NA | VV10777 | Nucleoside-diphosphate-sugar epimerase | chromosome I | CDS | 779474 | 912 | - | 0.421053 |
NA | VV10584 | Cell division protein FtsI | chromosome I | CDS | 599577 | 1728 | - | 0.515046 |
NA | VV12892 | Outer membrane protein | chromosome I | CDS | 2960242 | 990 | - | 0.451515 |
NA | VV12302 | Capsular polysaccharide biosynthesis glycosyltransferase putative | chromosome I | CDS | 2324603 | 1416 | + | 0.462571 |
NA | VV11023 | UDP-N-acetylglucosamine pyrophosphorylase | chromosome I | CDS | 1024322 | 1362 | + | 0.494861 |
NA | VV12876 | Membrane-fusion protein | chromosome I | CDS | 2944238 | 1032 | - | 0.482558 |
NA | VV10679 | UDP-N-acetylglucosamine enolpyruvyl transferase | chromosome I | CDS | 701970 | 1266 | - | 0.510269 |
NA | VV12304 | Polysaccharide export-related protein | chromosome I | CDS | 2327360 | 525 | + | 0.47619 |
NA | VV11391 | Putative salt-induced outer membrane protein | chromosome I | CDS | 1373848 | 768 | - | 0.46224 |
NA | VV12716 | Outer membrane protein | chromosome I | CDS | 2771957 | 1266 | + | 0.451817 |
NA | VV10830 | Lipid A biosynthesis lauroyl/myristoyl acyltransferase | chromosome I | CDS | 837561 | 939 | + | 0.500533 |
NA | VV11867 | Predicted membrane-associated Zn-dependent proteases 1 | chromosome I | CDS | 1860370 | 1359 | + | 0.470199 |
NA | VV10970 | Cell wall-associated hydrolase | chromosome I | CDS | 975158 | 435 | + | 0.549425 |
NA | VV12673 | Glycosyltransferase | chromosome I | CDS | 2722313 | 1107 | + | 0.492322 |
NA | VV11587 | Membrane protein | chromosome I | CDS | 1558471 | 897 | + | 0.443701 |
NA | VV10581 | UDP-N-acetylmuramyl pentapeptide phosphotransferase | chromosome I | CDS | 595627 | 1083 | - | 0.493998 |
NA | VV13157 | Membrane-fusion protein | chromosome I | CDS | 3234408 | 972 | - | 0.5 |
NA | VV11291 | N-acetylmuramoyl-L-alanine amidase | chromosome I | CDS | 1275172 | 1719 | + | 0.481675 |
NA | VV10796 | ADP-L-glycero-D-mannoheptose-6-epimerase | chromosome I | CDS | 804499 | 942 | + | 0.46603 |
NA | VV10407 | D-alanine-D-alanine ligase | chromosome I | CDS | 397744 | 1128 | - | 0.498227 |
NA | VV10660 | Organic solvent tolerance protein OstA | chromosome I | CDS | 682690 | 2331 | + | 0.447447 |
NA | VV11418 | Cell wall-associated hydrolase | chromosome I | CDS | 1394014 | 435 | - | 0.549425 |
NA | VV12791 | Predicted nucleoside-diphosphate-sugar epimerases | chromosome I | CDS | 2852321 | 699 | + | 0.506438 |
NA | VV10925 | Cell wall-associated hydrolase | chromosome I | CDS | 934455 | 435 | + | 0.549425 |
NA | VV11868 | Outer membrane surface antigen protein | chromosome I | CDS | 1861774 | 2415 | + | 0.459627 |
NA | VV11513 | Soluble lytic murein transglycosylase | chromosome I | CDS | 1488844 | 1140 | - | 0.447368 |
NA | VV10732 | Conserved hypothetical protein | chromosome I | CDS | 749596 | 564 | - | 0.462766 |
NA | VV12367 | Outer membrane lipoprotein-sorting protein | chromosome I | CDS | 2400940 | 786 | + | 0.478372 |
NA | VV10586 | Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis | chromosome I | CDS | 601631 | 951 | - | 0.483701 |
NA | VV12243 | Transporter | chromosome I | CDS | 2255486 | 1572 | + | 0.494911 |
NA | VV12905 | Nucleoside-diphosphate-sugar epimerase | chromosome I | CDS | 2972744 | 831 | + | 0.486161 |
NA | VV11686 | Outer membrane protein OmpU | chromosome I | CDS | 1668817 | 1023 | - | 0.449658 |
NA | VV12171 | Peptidoglycan-associated lipoprotein | chromosome I | CDS | 2174048 | 546 | + | 0.468864 |
NA | VV10803 | CMP-N-acetylneuraminic acid synthetase | chromosome I | CDS | 811883 | 702 | - | 0.470085 |
NA | VV11426 | Lipid A core-O-antigen ligase | chromosome I | CDS | 1406240 | 1764 | - | 0.464853 |
NA | VV10613 | ADP-heptose synthase | chromosome I | CDS | 625992 | 1431 | - | 0.504542 |
NA | VV11869 | Outer membrane protein | chromosome I | CDS | 1864214 | 501 | + | 0.453094 |
NA | VV12948 | LolA-like protein | chromosome I | CDS | 3011338 | 255 | - | 0.443137 |
NA | VV12665 | Glycosyltransferase | chromosome I | CDS | 2712172 | 1134 | + | 0.5 |
NA | VV10847 | Periplasmic protein TonB2 | chromosome I | CDS | 855966 | 633 | + | 0.511848 |
NA | VV10817 | Lipopolysaccharide biosynthesis glycosyltransferase | chromosome I | CDS | 825980 | 759 | + | 0.478261 |
NA | VV11882 | Soluble lytic murein transglycosylase | chromosome I | CDS | 1877372 | 1644 | - | 0.487226 |
NA | VV10506 | Lipoprotein signal peptidase | chromosome I | CDS | 504384 | 507 | - | 0.4714 |
NA | VV11872 | Acyl-UDP-N-acetylglucosamine O-acyltransferase | chromosome I | CDS | 1866301 | 789 | + | 0.463878 |
NA | VV11913 | Lipoprotein-34 NlpB | chromosome I | CDS | 1907032 | 1020 | + | 0.480392 |
NA | VV11450 | Cell shape-determining protein | chromosome I | CDS | 1434077 | 891 | + | 0.468013 |
NA | VV11175 | Glutamate racemase | chromosome I | CDS | 1168540 | 792 | + | 0.477273 |
NA | VV12309 | Putative glycosyltransferase protein | chromosome I | CDS | 2333721 | 1206 | + | 0.465174 |
NA | VV10778 | Glycosyltransferase | chromosome I | CDS | 780382 | 558 | - | 0.349462 |
NA | VV10138 | Starvation-inducible outer membrane lipoprotein | chromosome I | CDS | 123894 | 555 | - | 0.468468 |
NA | VV11682 | Membrane protein | chromosome I | CDS | 1664147 | 1293 | - | 0.461717 |
NA | VV11072 | Cell wall-associated hydrolase | chromosome I | CDS | 1065223 | 435 | - | 0.549425 |
NA | VV10130 | Membrane-bound lytic murein transglycosylase B | chromosome I | CDS | 116691 | 963 | - | 0.481828 |
NA | VV10270 | Apolipoprotein N-acyltransferase | chromosome I | CDS | 260623 | 1521 | + | 0.501644 |
NA | VV12169 | TolA protein | chromosome I | CDS | 2171695 | 960 | + | 0.464583 |
NA | VV11652 | Conserved hypothetical protein | chromosome I | CDS | 1621076 | 2340 | + | 0.483761 |
NA | VV12875 | Membrane-fusion protein | chromosome I | CDS | 2943151 | 1086 | - | 0.483425 |
NA | VV10780 | UDP-N-acetylglucosamine 2-epimerase | chromosome I | CDS | 790916 | 1071 | - | 0.46592 |
NA | VV10776 | Sugar transferase involved in lipopolysaccharide synthesis | chromosome I | CDS | 778916 | 387 | - | 0.423773 |
NA | VV10411 | Choline-glycine betaine transporter | chromosome I | CDS | 402005 | 1782 | + | 0.473064 |
NA | VV12666 | Glycosyltransferase | chromosome I | CDS | 2713413 | 1194 | + | 0.505025 |
NA | VV12487 | Cell wall-associated hydrolase | chromosome I | CDS | 2530985 | 483 | + | 0.436853 |
NA | VV12382 | Outer membrane protein | chromosome I | CDS | 2417616 | 672 | - | 0.49256 |
NA | VV10577 | UDP-N-acetylmuramate-alanine ligase | chromosome I | CDS | 590499 | 1461 | - | 0.49076 |
NA | VV12949 | LolA-like protein | chromosome I | CDS | 3011555 | 381 | - | 0.433071 |
NA | VV12660 | Periplasmic protein involved in polysaccharide export | chromosome I | CDS | 2704612 | 2100 | + | 0.505714 |
NA | VV12125 | Outer membrane lipoprotein | chromosome I | CDS | 2126643 | 426 | + | 0.424883 |
NA | VV12799 | Outer membrane phospholipase A | chromosome I | CDS | 2858340 | 768 | - | 0.46224 |
NA | VV11451 | Cell shape-determining protein | chromosome I | CDS | 1434957 | 489 | + | 0.482618 |
NA | VV11502 | Cell wall-associated hydrolase | chromosome I | CDS | 1482683 | 435 | - | 0.549425 |
NA | VV10774 | Predicted UDP-glucose 6-dehydrogenase | chromosome I | CDS | 775597 | 1167 | - | 0.450728 |
NA | VV11770 | UDP-glucose 4-epimerase | chromosome I | CDS | 1761325 | 1008 | + | 0.536706 |
NA | VV12086 | Tetraacyldisaccharide 4`-kinase | chromosome I | CDS | 2082884 | 1008 | + | 0.482143 |
NA | VV10810 | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | chromosome I | CDS | 818281 | 1143 | - | 0.496938 |
NA | VV10582 | UDP-N-acetylmuramyl pentapeptide synthase | chromosome I | CDS | 596706 | 1362 | - | 0.492658 |
NA | VV11651 | Membrane carboxypeptidase | chromosome I | CDS | 1618639 | 2370 | + | 0.500422 |
NA | VV11376 | Membrane carboxypeptidase/penicillin-binding protein | chromosome I | CDS | 1359796 | 2409 | - | 0.489415 |
NA | VV12082 | Conserved hypothetical protein | chromosome I | CDS | 2076893 | 1245 | + | 0.492369 |
NA | VV12088 | 3-deoxy-manno-octulosonate cytidylyltransferase | chromosome I | CDS | 2084051 | 756 | + | 0.498677 |
NA | VV12839 | Predicted nucleoside-diphosphate-sugar epimerases | chromosome I | CDS | 2903578 | 1503 | + | 0.507651 |
NA | VV10712 | Outer membrane protein | chromosome I | CDS | 730679 | 1716 | - | 0.497669 |
NA | VV12672 | Uncharacterized protein involved in exopolysaccharide biosynthesis | chromosome I | CDS | 2720672 | 1431 | + | 0.501747 |
NA | VV10493 | Membrane protein | chromosome I | CDS | 490460 | 987 | + | 0.467072 |
NA | VV12305 | Exopolysaccharide biosynthesis protein | chromosome I | CDS | 2327886 | 2172 | + | 0.504144 |
NA | VV10706 | UDP-N-acetylmuramate-alanine ligase | chromosome I | CDS | 722577 | 1455 | - | 0.502406 |
NA | VV10797 | Lipid A biosynthesis (kdo)2-(lauroyl)-lipid IVA acyltransferase | chromosome I | CDS | 805612 | 981 | + | 0.438328 |
NA | VV10274 | Rare lipoprotein B | chromosome I | CDS | 265660 | 480 | + | 0.475 |
NA | VV10490 | Soluble lytic murein transglycosylase | chromosome I | CDS | 485983 | 1902 | - | 0.461619 |
NA | VV10816 | ADP-heptose:LPS heptosyltransferase | chromosome I | CDS | 824901 | 1062 | + | 0.503766 |
NA | VV10807 | UDP-N-acetylglucosamine 2-epimerase | chromosome I | CDS | 815106 | 1164 | - | 0.444158 |
NA | VV10786 | Periplasmic protein involved in capsular polysaccharide export | chromosome I | CDS | 795677 | 1137 | - | 0.481091 |
NA | VV11393 | Alanine racemase | chromosome I | CDS | 1376167 | 1101 | + | 0.495005 |
NA | VV10255 | Outer membrane lipoprotein LolB | chromosome I | CDS | 248585 | 582 | + | 0.47079 |
NA | VV12643 | Periplasmic protease | chromosome I | CDS | 2684487 | 2001 | - | 0.433283 |
NA | VV10280 | Rare lipoprotein A | chromosome I | CDS | 271059 | 795 | + | 0.456604 |
NA | VV11912 | Dihydrodipicolinate synthase | chromosome I | CDS | 1906107 | 879 | + | 0.458476 |
NA | VV10473 | Cell wall-associated hydrolase | chromosome I | CDS | 472541 | 435 | + | 0.549425 |
NA | VV10238 | Outer membrane protein | chromosome I | CDS | 228819 | 1122 | - | 0.476827 |
NA | VV10007 | Small-conductance mechanosensitive channel | chromosome I | CDS | 7740 | 2517 | - | 0.377433 |
NA | VV12717 | Outer membrane protein | chromosome I | CDS | 2773224 | 627 | + | 0.452951 |
NA | VV11680 | Membrane-fusion protein | chromosome I | CDS | 1659787 | 1095 | + | 0.485845 |
NA | VV10096 | dTDP-glucose pyrophosphorylase | chromosome I | CDS | 91318 | 348 | - | 0.502874 |
NA | VV10820 | Phosphoglycerol transferase | chromosome I | CDS | 828399 | 1977 | - | 0.481538 |
NA | VV10580 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | chromosome I | CDS | 594265 | 1329 | - | 0.487585 |
NA | VV12674 | Glycosyltransferase | chromosome I | CDS | 2723416 | 1230 | + | 0.482114 |
NA | VV12080 | Conserved hypothetical protein | chromosome I | CDS | 2075084 | 1122 | + | 0.487522 |
NA | VV11818 | Lipoprotein | chromosome I | CDS | 1813351 | 570 | - | 0.447368 |
NA | VV11801 | Membrane-bound lytic murein transglycosylase | chromosome I | CDS | 1799230 | 1104 | + | 0.508152 |
NA | VV10641 | Glucosamine--fructose-6-phosphateaminotransferas e | chromosome I | CDS | 658892 | 1833 | - | 0.493181 |
NA | VV11342 | UDP-glucose 4-epimerase | chromosome I | CDS | 1326160 | 1011 | - | 0.488625 |
NA | VV10808 | Sialic acid synthase | chromosome I | CDS | 816269 | 1002 | - | 0.474052 |
NA | VV11870 | UDP-3-O-glucosamine N-acyltransferase; COG1044 | chromosome I | CDS | 1864723 | 1032 | + | 0.483527 |
NA | VV10811 | Predicted nucleoside-diphosphate sugar epimerases | chromosome I | CDS | 819436 | 1191 | - | 0.440806 |
NA | VV10799 | 3-deoxy-D-manno-octulosonic-acid transferase | chromosome I | CDS | 807647 | 1260 | + | 0.457936 |
NA | VV12675 | Sugar transferase involved in lipopolysaccharide synthesis | chromosome I | CDS | 2724642 | 642 | + | 0.475078 |
NA | VV11845 | 3-beta hydroxysteroid dehydrogenase | chromosome I | CDS | 1842788 | 987 | - | 0.429585 |
NA | VV10798 | ADP-heptose--LPS heptosyltransferase II WaaF | chromosome I | CDS | 806595 | 1059 | + | 0.476865 |
NA | VV12667 | Glycosyltransferase | chromosome I | CDS | 2714603 | 1179 | + | 0.480068 |
NA | VV10278 | Cell division protein FtsI | chromosome I | CDS | 268343 | 1596 | + | 0.492481 |
NA | VV12671 | Glycosyltransferase | chromosome I | CDS | 2719494 | 1179 | + | 0.485157 |
NA | VV12689 | Membrane-fusion protein | chromosome I | CDS | 2737683 | 975 | + | 0.504615 |
NA | VV11915 | D,D-carboxypeptidase-related protein | chromosome I | CDS | 1908337 | 702 | - | 0.480057 |
NA | VV10815 | Diacylglycerol kinase | chromosome I | CDS | 824410 | 390 | - | 0.484615 |
NA | VV11080 | Membrane-fusion protein | chromosome I | CDS | 1073713 | 1086 | - | 0.468692 |
NA | VV13024 | AsmA protein | chromosome I | CDS | 3088203 | 1200 | - | 0.476667 |
NA | VV11563 | Membrane GTPase LepA | chromosome I | CDS | 1533660 | 1794 | + | 0.473244 |
NA | VV12071 | Conserved hypothetical protein | chromosome I | CDS | 2065839 | 876 | + | 0.474886 |
NA | VV10571 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | chromosome I | CDS | 586005 | 918 | - | 0.445534 |
NA | VV10775 | Predicted nucleoside-diphosphate sugar epimerase | chromosome I | CDS | 776939 | 1953 | - | 0.462878 |
NA | VV12310 | Putative glycosyltransferase protein | chromosome I | CDS | 2334932 | 1107 | + | 0.464318 |
NA | VV12566 | Cell wall-associated hydrolase | chromosome I | CDS | 2602907 | 429 | - | 0.456876 |
NA | VV12688 | Outer membrane protein | chromosome I | CDS | 2736277 | 1410 | + | 0.478014 |
NA | VV12669 | Lipid A core-O-antigen ligase | chromosome I | CDS | 2717235 | 1362 | + | 0.500734 |
NA | VV10578 | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase | chromosome I | CDS | 591973 | 1047 | - | 0.51767 |
NA | VV10575 | Cell division protein FtsQ | chromosome I | CDS | 589540 | 630 | - | 0.471429 |
NA | VV12308 | Putative glycosyltransferase protein | chromosome I | CDS | 2332726 | 999 | + | 0.493493 |
NA | VV11011 | Glucose inhibited division protein B | chromosome I | CDS | 1014698 | 636 | + | 0.454403 |
NA | VV11685 | D-alanyl-D-alanine carboxypeptidase | chromosome I | CDS | 1667292 | 1431 | - | 0.466108 |
NA | VV10249 | 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase | chromosome I | CDS | 243016 | 855 | - | 0.480702 |
NA | VV10472 | Murein endopeptidase | chromosome I | CDS | 470862 | 768 | - | 0.481771 |
NA | VV10779 | UDP-N-acetyl-D-mannosaminuronate dehydrogenase | chromosome I | CDS | 789456 | 1272 | - | 0.437107 |
NA | VV12794 | Putative effector of murein hydrolase | chromosome I | CDS | 2854935 | 678 | + | 0.49705 |
NA | VV10504 | Penicillin tolerance protein | chromosome I | CDS | 502728 | 963 | - | 0.496366 |
NA | VV11190 | Cell wall-associated hydrolase | chromosome I | CDS | 1174734 | 435 | - | 0.549425 |
NA | VV12579 | Small-conductance mechanosensitive channel | chromosome I | CDS | 2617192 | 882 | - | 0.479592 |
NA | VV11428 | UDP-glucose pyrophosphorylase | chromosome I | CDS | 1411035 | 873 | - | 0.451317 |
NA | VV10781 | Putative tyrosine-protein kinase Wzc | chromosome I | CDS | 792124 | 2184 | - | 0.45467 |
NA | VV12932 | Cyclopropane-fatty-acyl-phospholipid synthase | chromosome I | CDS | 2997232 | 1167 | - | 0.426735 |
NA | VV10612 | Outer membrane protein TolC | chromosome I | CDS | 624947 | 933 | + | 0.46731 |
NA | VV11873 | Lipid A disaccharide synthetase | chromosome I | CDS | 1867182 | 1143 | + | 0.48294 |
NA | VV11103 | Membrane protein | chromosome I | CDS | 1103429 | 798 | + | 0.37594 |
NA | VV11542 | Small-conductance mechanosensitive channel | chromosome I | CDS | 1515664 | 864 | + | 0.443287 |
NA | VV13023 | AsmA protein | chromosome I | CDS | 3087293 | 972 | - | 0.457819 |
NA | VV10341 | Transglycosylase | chromosome I | CDS | 329051 | 1590 | + | 0.479245 |
NA | VV13102 | Sodium-type flagellar protein motY precursor | chromosome I | CDS | 3170323 | 882 | - | 0.447846 |
NA | VV12659 | Outer membrane protein | chromosome I | CDS | 2703773 | 843 | + | 0.501779 |
NA | VV10218 | Muramidase | chromosome I | CDS | 211647 | 921 | - | 0.474484 |
NA | VV10281 | D-alanyl-D-alanine carboxypeptidase | chromosome I | CDS | 271946 | 1182 | + | 0.463621 |
NA | VV10818 | ADP-heptose:LPS heptosyltransferase II | chromosome I | CDS | 826707 | 990 | - | 0.488889 |
NA | VV11197 | UDP-N-acetylmuramate dehydrogenase | chromosome I | CDS | 1178793 | 1044 | + | 0.460728 |