Gene list
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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome 2
Number of genes found: 65
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Photobacterium profundum, ss9 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | PBPRB1300 | hypothetical protein | chromosome 2 | CDS | 1442587 | 561 | - | 0.424242 |
NA | PBPRB0064 | hypothetical protein | chromosome 2 | CDS | 81829 | 510 | + | 0.390196 |
NA | PBPRB0265 | hypothetical protein | chromosome 2 | CDS | 303161 | 843 | - | 0.432977 |
NA | PBPRB1678 | Hypothetical periplasmic linker protein | chromosome 2 | CDS | 1822653 | 1086 | - | 0.429098 |
NA | PBPRB0916 | hypothetical protein | chromosome 2 | CDS | 1056553 | 627 | - | 0.370016 |
NA | PBPRB0266 | hypothetical protein | chromosome 2 | CDS | 304131 | 3000 | - | 0.436 |
NA | PBPRB0334 | hypothetical protein | chromosome 2 | CDS | 383101 | 741 | + | 0.4278 |
NA | PBPRB1639 | hypothetical outer membrane protein | chromosome 2 | CDS | 1787124 | 1020 | + | 0.40098 |
NA | PBPRB1861 | hypothetical protein | chromosome 2 | CDS | 2039906 | 1437 | + | 0.407098 |
NA | PBPRB1532 | Hypothetical protein | chromosome 2 | CDS | 1681615 | 915 | + | 0.402186 |
NA | PBPRB0927 | putative D-alanine-D-alanine ligase | chromosome 2 | CDS | 1068648 | 993 | + | 0.410876 |
NA | PBPRB1595 | Hypothetical protein | chromosome 2 | CDS | 1745753 | 342 | + | 0.312865 |
NA | PBPRB1086 | hypothetical protein | chromosome 2 | CDS | 1231775 | 696 | + | 0.409483 |
NA | PBPRB1758 | hypothetical ABC-transporter outer membrane component | chromosome 2 | CDS | 1922779 | 1524 | + | 0.404856 |
NA | PBPRB1756 | hypothetical protein | chromosome 2 | CDS | 1919328 | 1338 | + | 0.395366 |
NA | PBPRB1342 | hypothetical protein | chromosome 2 | CDS | 1496659 | 813 | + | 0.429274 |
NA | PBPRB0071 | hypothetical protein | chromosome 2 | CDS | 90507 | 930 | - | 0.4 |
AGGA | PBPRB0583 | putative agglutination protein | chromosome 2 | CDS | 685192 | 1314 | - | 0.410198 |
AGR_C_45 | PBPRB0873 | putative multidrug efflux membrane fusion protein | chromosome 2 | CDS | 1006424 | 1125 | + | 0.416 |
AGR_L_30 | PBPRB0306 | hypothetical glycosyltransferase, probably involved in cell wall biogenesis | chromosome 2 | CDS | 346733 | 2232 | - | 0.43862 |
ALR | PBPRB1952 | putative alanine racemase | chromosome 2 | CDS | 2150465 | 1218 | + | 0.407225 |
BB3850 | PBPRB1024 | putative transporter, BCCT family | chromosome 2 | CDS | 1167279 | 1605 | - | 0.418692 |
BRA0137 | PBPRB0751 | hypothetical protein | chromosome 2 | CDS | 878765 | 1452 | + | 0.415289 |
BT3904 | PBPRB0514 | conserved hypothetical protein | chromosome 2 | CDS | 600825 | 978 | + | 0.462168 |
CT0995 | PBPRB1536 | Conserved hypothetical protein | chromosome 2 | CDS | 1686384 | 864 | - | 0.451389 |
ECS0919 | PBPRB0791 | putative D-alanyl-D-alanine carboxypeptidase | chromosome 2 | CDS | 922850 | 1185 | - | 0.413502 |
ECS4016 | PBPRB0142 | putative phosphosugar isomerase | chromosome 2 | CDS | 164506 | 1164 | + | 0.412371 |
GALE | PBPRB0983 | putative UDP-glucose 4-epimerase | chromosome 2 | CDS | 1122282 | 1017 | - | 0.437561 |
HD1253 | PBPRB0246 | putative diacylglycerol kinase | chromosome 2 | CDS | 282267 | 426 | + | 0.389671 |
HTRB | PBPRB1986 | putative lipid A biosynthesis lauroyl acyltransferase | chromosome 2 | CDS | 2181740 | 930 | - | 0.426882 |
LIN2197 | PBPRB1685 | Hypothetical glycine betaine transporter | chromosome 2 | CDS | 1830305 | 1488 | - | 0.519489 |
MRCB | PBPRB0616 | hypothetical membrane carboxypeptidase | chromosome 2 | CDS | 735560 | 2391 | + | 0.436219 |
PA4819 | PBPRB0750 | hypothetical glycosyl transferase | chromosome 2 | CDS | 877611 | 1155 | + | 0.428571 |
PLU1297 | PBPRB0070 | putative penicillin-binding protein 2 | chromosome 2 | CDS | 88149 | 2055 | - | 0.462774 |
PP1185 | PBPRB1460 | hypothetical protein | chromosome 2 | CDS | 1614503 | 510 | - | 0.411765 |
PSPTO229 | PBPRB0582 | putative outer membrane protein | chromosome 2 | CDS | 684584 | 591 | - | 0.426396 |
PSPTO273 | PBPRB0669 | hypothetical protein | chromosome 2 | CDS | 793837 | 321 | - | 0.404984 |
S1821 | PBPRB1573 | hypothetical cyclopropane-fatty-acyl-phospholipid synthase protein | chromosome 2 | CDS | 1723265 | 1029 | + | 0.424684 |
SCBAC28G | PBPRB0201 | hypothetical protein | chromosome 2 | CDS | 221191 | 516 | - | 0.476744 |
SMC00430 | PBPRB1065 | hypothetical oxidoreductase protein | chromosome 2 | CDS | 1209016 | 582 | - | 0.431271 |
SO0428 | PBPRB0002 | hypothetical protein | chromosome 2 | CDS | 2805 | 2283 | + | 0.422689 |
SO0428 | PBPRB1267 | conserved hypothetical protein | chromosome 2 | CDS | 1411335 | 2229 | - | 0.435621 |
SO2194 | PBPRB0759 | hypothetical OmpA family protein | chromosome 2 | CDS | 888106 | 759 | + | 0.444005 |
SO4090 | PBPRB0513 | conserved hypothetical protein | chromosome 2 | CDS | 599422 | 1407 | + | 0.427861 |
STM1377 | PBPRB0744 | putative lipoprotein | chromosome 2 | CDS | 871921 | 264 | - | 0.412879 |
STY2450 | PBPRB1494 | putative lipoprotein NlpC | chromosome 2 | CDS | 1649504 | 507 | - | 0.428008 |
TGFBI | PBPRB1807 | hypothetical protein | chromosome 2 | CDS | 1971863 | 957 | - | 0.515152 |
TONB2 OR | PBPRB1217 | putative TonB2 protein | chromosome 2 | CDS | 1364123 | 684 | - | 0.457602 |
TONB2 OR | PBPRB0698 | hypothetical tonB2 protein | chromosome 2 | CDS | 817002 | 672 | + | 0.458333 |
VC2213 | PBPRB0642 | hypothetical outer membrane protein OmpA | chromosome 2 | CDS | 765310 | 975 | + | 0.441026 |
VP0166 | PBPRB0695 | putative biopolymer transport proteinExbB-related protein | chromosome 2 | CDS | 814701 | 1368 | + | 0.428363 |
VP0557 | PBPRB0441 | hypothetical glycosylase | chromosome 2 | CDS | 513060 | 1443 | - | 0.349272 |
VP1176 | PBPRB1679 | Hypothetical multidrug resistance protein | chromosome 2 | CDS | 1823741 | 1068 | - | 0.420412 |
VPA0557 | PBPRB1127 | conserved hypothetical protein | chromosome 2 | CDS | 1273809 | 753 | - | 0.415671 |
VPA0558 | PBPRB1126 | conserved hypothetical protein | chromosome 2 | CDS | 1272486 | 1230 | - | 0.433333 |
VPA0559 | PBPRB1125 | conserved hypothetical protein | chromosome 2 | CDS | 1271264 | 1233 | - | 0.450933 |
VVA0333 | PBPRB0584 | putative secretion protein, HlyD family | chromosome 2 | CDS | 686511 | 1431 | - | 0.384347 |
VVA0543 | PBPRB0333 | hypothetical protein | chromosome 2 | CDS | 382546 | 378 | + | 0.407407 |
VVA1499 | PBPRB0371 | putative outer membrane protein TolC | chromosome 2 | CDS | 421279 | 1299 | - | 0.424172 |
VVA1500 | PBPRB0372 | conserved hypothetical protein | chromosome 2 | CDS | 422570 | 1140 | - | 0.425439 |
XACB0036 | PBPRB1621 | hypothetical conjugal transfer protein | chromosome 2 | CDS | 1768486 | 528 | + | 0.481061 |
XCC1439 | PBPRB1637 | hypothetical RND multidrug efflux membrane fusion protein MexE | chromosome 2 | CDS | 1782511 | 1143 | + | 0.410324 |
Y3110 | PBPRB1923 | hypothetical lipoprotein | chromosome 2 | CDS | 2116364 | 399 | - | 0.431078 |
YCDQ | PBPRB0456 | Putative glycosyl transferase | chromosome 2 | CDS | 529380 | 1263 | - | 0.411718 |
YPO0284 | PBPRB1864 | conserved hypothetical pro | chromosome 2 | CDS | 2044343 | 633 | - | 0.420221 |