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2024-05-17 13:54:18

Gene list

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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome

Number of genes found: 126

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Prochlorococcus marinus str. MIT 9313, MIT9313
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PMT1930 conserved hypothetical proteinchromosome CDS2039538 1038 - 0.540462
NA PMT0752 LysM motif:Peptidase family M23/M37chromosome CDS820722 1074 + 0.468343
NA PMT1524 small mechanosensitive ion channel, MscS familychromosome CDS1615031 1113 - 0.466307
NA PMT0585 Glycosyl transferase, family 2chromosome CDS642895 945 - 0.524868
NA PMT0595 putative lipoprotein signal peptidasechromosome CDS651113 498 + 0.504016
NA PMT0320 conserved hypothetical proteinchromosome CDS366690 810 - 0.550617
NA PMT0109 ABC transporter, membrane componentchromosome CDS124496 813 - 0.386224
NA PMT0034 conserved hypothetical proteinchromosome CDS36414 921 - 0.533116
NA PMT0086 Possible UDP-glucose-4-epimerasechromosome CDS93599 927 + 0.435814
NA PMT0058 Glycosyl transferase, family 2chromosome CDS57742 1332 + 0.533784
NA PMT0102 Surface polysaccharide biosynthesis protein, possible cytidylyltransferasechromosome CDS115677 819 + 0.394383
NA PMT2149 possible mechanosensitive ion channelchromosome CDS2265509 1491 + 0.522468
NA PMT0108 ABC transporter, ATP binding proteinchromosome CDS123063 1434 - 0.370293
NA PMT2144 conserved hypothetical proteinchromosome CDS2258061 1125 + 0.471111
NA PMT1375 conserved hypothetical proteinchromosome CDS1459469 1083 + 0.551247
NA PMT1927 putative glycosyl transferase, group 1chromosome CDS2035154 1182 - 0.568528
NA PMT1766 Glycosyl transferase, family 2chromosome CDS1856710 963 + 0.547248
NA PMT2252 conserved hypothetical proteinchromosome CDS2383289 1314 - 0.533486
NA PMT0095 capsular polysaccharide biosynthesis proteinchromosome CDS109248 1020 + 0.403922
NA PMT0915 Bacterial outer membrane proteinchromosome CDS997299 645 - 0.413953
NA PMT0116 possible glycosyltransferasechromosome CDS132995 627 + 0.38756
NA PMT0087 glycosyltransferasechromosome CDS94522 2217 - 0.400541
NA PMT0776 carboxyl-terminal processing proteasechromosome CDS850375 1362 - 0.451542
NA PMT1363 conserved hypothetical proteinchromosome CDS1448943 1842 - 0.557003
NA PMT1908 possible sugar transferasechromosome CDS2012205 1332 + 0.545796
NA PMT0394 Cell wall hydrolase/autolysinchromosome CDS442365 1095 - 0.559817
NA PMT2077 small mechanosensitive ion channel, MscS familychromosome CDS2187636 1122 + 0.472371
NA PMT0096 capsular polysaccharide biosynthesis proteinchromosome CDS110264 1167 + 0.401028
NA PMT0979 conserved hypothetical proteinchromosome CDS1058001 1299 - 0.466513
NA PMT1976 chromosome CDS2085116 2094 - 0.564947
NA PMT1926 Glycosyl transferase, group 1chromosome CDS2034025 1122 - 0.582888
NA PMT1965 Glycosyl transferase, family 2:TPR repeatchromosome CDS2075710 1284 + 0.565421
NA PMT1156 possible membrane fusion proteinchromosome CDS1245052 1131 + 0.557029
NA PMT0854 putative mechanosensitive ion channel, MscS familychromosome CDS933805 1977 - 0.413758
NA PMT1617 conserved hypothetical proteinchromosome CDS1718438 1128 - 0.466312
NA PMT1934 Glycosyl transferase, family 2chromosome CDS2042628 975 - 0.488205
NA PMT0751 Peptidase family M23/M37chromosome CDS818913 1008 + 0.450397
NA PMT1821 possible bicarbonate transporter, ICT familychromosome CDS1928931 1320 + 0.560606
NA PMT0094 possible transporter for effluxchromosome CDS107834 1386 + 0.39899
NA PMT0873 possible Transglycosylase SLT domainchromosome CDS956568 1068 - 0.505618
NA PMT1587 conserved hypothetical proteinchromosome CDS1688507 1302 - 0.569892
NA PMT0084 putative glucose-1-phosphate thymidylyltransferasechromosome CDS91775 132 + 0.477273
NA PMT1190 conserved hypothetical proteinchromosome CDS1280593 819 + 0.518926
NA PMT1573 ABC-transporter componentchromosome CDS1671339 1077 + 0.440111
NA PMT0976 possible Protein of unknown function DUF42chromosome CDS1053325 330 + 0.481818
NA PMT0182 possible RND family outer membrane efflux proteinchromosome CDS205668 1740 + 0.467241
NA PMT0433 hypotheticalchromosome CDS488517 702 - 0.44302
NA PMT0519 possible mRNA-binding proteinchromosome CDS568295 1026 - 0.522417
NA PMT1413 chloroplast outer envelope membrane protein homologchromosome CDS1498742 2289 - 0.496287
NA PMT0130 conserved hypothetical proteinchromosome CDS148790 1191 - 0.492023
NA PMT2183 conserved hypothetical proteinchromosome CDS2308871 420 + 0.519048
NA PMT1903 Putative nucleotide sugar epimerasechromosome CDS2006310 1023 - 0.525904
NA PMT0104 surface polysaccharide biosynthesis protein, transferasechromosome CDS117908 1599 + 0.39212
NA PMT1358 Peptidase family M23/M37chromosome CDS1444331 972 - 0.57716
NA PMT1928 putative glycosyl transferase, group 1chromosome CDS2036332 1209 - 0.523573
NA PMT0980 Outer membrane efflux proteinchromosome CDS1059401 1590 - 0.44717
NA PMT0076 possible transporter componentchromosome CDS79135 1176 - 0.487245
NA PMT0576 putative carboxypeptidasechromosome CDS630211 615 - 0.523577
NA PMT1846 Glycosyl transferase, family 4chromosome CDS1954041 1146 - 0.546248
NA PMT0209 Glycosyl transferases group 1chromosome CDS239513 1179 - 0.566582
NA PMT0343 possible apolipoprotein n-acyltransferasechromosome CDS389614 1500 + 0.581333
NA PMT0446 conserved hypothetical proteinchromosome CDS504168 1008 + 0.541667
NA PMT1771 Proline-rich regionchromosome CDS1864803 1623 + 0.52557
NA PMT0048 Putative penicillin-binding proteinchromosome CDS47917 1803 + 0.535774
NA PMT2048 conserved hypothetical proteinchromosome CDS2159748 933 - 0.583065
NA PMT0190 possible LysM domainchromosome CDS219569 1446 - 0.547026
NA PMT0310 probable glycosyltransferasechromosome CDS356288 1233 + 0.563666
NA PMT1765 conserved hypothetical proteinchromosome CDS1855914 753 + 0.589641
NA PMT0589 possible ABC transporter componentchromosome CDS646023 885 - 0.536723
NA PMT1824 possible soluble lytic transglycosylasechromosome CDS1932930 2034 + 0.564897
NA PMT0543 Glycosyl transferase, family 2chromosome CDS595473 1224 - 0.485294
NA PMT1920 glycosyl transferase, group 1chromosome CDS2028946 1269 - 0.551615
NA PMT0271 putative penicillin binding proteinchromosome CDS310204 1977 - 0.549823
NA PMT0311 galactosyl-1-phosphate transferasechromosome CDS357551 759 + 0.513834
NA PMT0580 D-ala-D-ala dipeptidasechromosome CDS636489 765 - 0.535948
NA PMT2012 Putative sugar-phosphate nucleotidyl transferasechromosome CDS2127021 1179 + 0.526718
NA PMT1017 hypotheticalchromosome CDS1092700 285 - 0.494737
NA PMT0642 conserved hypothetical proteinchromosome CDS694702 828 - 0.535024
alr PMT1763 putative Alanine racemasechromosome CDS1852940 1197 + 0.557226
ctpA PMT1650 carboxyl-terminal processing proteinasechromosome CDS1757156 1341 + 0.56003
dacB, pbp PMT0720 putative D-Ala-D-Ala carboxypeptidase 3 (S13) familychromosome CDS779074 1320 + 0.515152
dapA PMT0065 Dihydrodipicolinate synthetasechromosome CDS66420 909 + 0.556656
ddlA PMT0322 D-alanine--D-alanine ligasechromosome CDS367955 1062 - 0.557439
degT PMT1884 putative pleiotropic regulatory proteinchromosome CDS1988562 1227 + 0.533822
dgkA PMT2066 Prokaryotic diacylglycerol kinasechromosome CDS2173803 459 + 0.575163
ftsI PMT1249 putative peptidoglycan synthetase (pbp transpeptidase domain)chromosome CDS1336938 1809 - 0.555556
galE PMT1907 UDP-glucose-4-epimerasechromosome CDS2011096 1047 + 0.551098
gidB PMT1496 putative glucose inhibited division protein Bchromosome CDS1579977 744 + 0.584677
glmS PMT1953 Glutamine--fructose-6-phosphate transaminase (isomerizing)chromosome CDS2063076 1905 - 0.549606
glmU PMT0400 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS449558 1341 + 0.524981
kdsA PMT1925 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetasechromosome CDS2033006 852 + 0.559859
kdsB PMT1914 putative 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS2019784 816 - 0.523284
lepA PMT0257 GTP-binding protein LepAchromosome CDS295179 1815 + 0.499174
lpxA PMT1410 UDP-N-acetylglucosamine acyltransferasechromosome CDS1496576 852 - 0.549296
lpxB PMT1409 Lipid-A-disaccharide synthetasechromosome CDS1495398 1179 - 0.552163
lpxC PMT1412 UDP-3-0-acyl N-acetylglucosamine deacetylasechromosome CDS1497885 858 - 0.561772
lpxD PMT0530 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS578003 1044 + 0.562261
lytB PMT1854 LytB protein homologchromosome CDS1961933 1197 + 0.498747
menC PMT2058 putative O-succinylbenzoate synthasechromosome CDS2167196 969 - 0.592363
mraY PMT2264 Putativephospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS2394717 1122 + 0.550802
mreC PMT0143 putative rod shape-determining proteinchromosome CDS162543 744 + 0.568548
murB PMT0026 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS28356 924 - 0.547619
murC PMT0027 Probable UDP-N-acetylmuramate-alanine ligasechromosome CDS29255 1467 - 0.526244
murD PMT1434 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS1522255 1383 + 0.571945
murE PMT0230 UDP-N-acetylmuramyl-tripeptide synthetasechromosome CDS263876 1524 + 0.570866
murF PMT0401 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligasechromosome CDS450925 1398 - 0.54721
murG PMT2101 Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferasechromosome CDS2214774 1086 - 0.607735
murI PMT0393 Putative aspartate and glutamate racemases:Glutamate racemasechromosome CDS441562 807 - 0.556382
neuB PMT0106 N-acetylneuraminate synthasechromosome CDS120917 1065 + 0.406573
nfrC PMT1312 UDP-N-acetylglucosamine 2-epimerasechromosome CDS1398853 1113 - 0.559748
petA PMT1323 Cytochrome fchromosome CDS1407682 933 + 0.481243
putative murA PMT0332 UDP-N-glucosamine 1-carboxyvinyltransferasechromosome CDS379465 1305 - 0.547126
rfbB PMT0115 dTDP-glucose-4,6-dehydratasechromosome CDS130765 1113 + 0.469901
rfbB PMT1958 NAD dependent epimerase/dehydratase familychromosome CDS2069145 933 + 0.49089
rfbC PMT0113 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS127765 618 + 0.542071
rfbD PMT0114 putative dTDP-4-dehydrorhamnose reductasechromosome CDS128379 906 + 0.556291
rffM PMT1864 Glycosyl transferase WecB/TagA/CpsF familychromosome CDS1970814 744 - 0.555108
rlpA PMT1690 possible rare lipoprotein Achromosome CDS1793089 600 - 0.503333
rmlA, rfbA PMT0112 glucose-1-phosphate thymidylyltransferasechromosome CDS126849 927 + 0.558792
sps PMT2268 Sucrose phosphate synthasechromosome CDS2398332 2133 - 0.506798
sqdB PMT0050 sulfolipid (UDP-sulfoquinovose) biosynthesis proteinchromosome CDS50930 1197 - 0.540518
sqdX PMT0049 SqdXchromosome CDS49755 1230 - 0.554472
ugd PMT1904 UDP-glucose 6-dehydrogenasechromosome CDS2007329 1449 - 0.543823
ycf39 PMT0506 conserved hypothetical proteinchromosome CDS557757 684 + 0.527778
ycf39 PMT1173 putative chaperon-like protein for quinone binding in photosystem IIchromosome CDS1264375 963 - 0.510903
yvoC, lgt, umpA PMT1324 putative prolipoprotein diacylglyceryl transferasechromosome CDS1408635 915 + 0.520219