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2024-05-09 17:39:03

Gene list

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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome

Number of genes found: 105

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PMM0915 putative lipoprotein signal peptidasechromosome CDS875954 462 + 0.190476
NA PMM1308 conserved hypothetical proteinchromosome CDS1261299 726 + 0.258953
NA PMM0748 possible ABC transporter componentchromosome CDS709356 918 + 0.303922
NA PMM1338 chloroplast outer envelope membrane protein homologchromosome CDS1287534 2142 - 0.332866
NA PMM0171 conserved hypothetical proteinchromosome CDS164984 903 - 0.316722
NA PMM1379 putative dape gene and orf2chromosome CDS1327594 885 + 0.296045
NA PMM0397 possible Glycosyl transferase, group 1chromosome CDS375753 1167 - 0.330763
NA PMM1207 Putative fucose synthetasechromosome CDS1156082 954 - 0.292453
NA PMM0677 carboxyl-terminal processing proteasechromosome CDS645013 1290 + 0.307752
NA PMM0582 conserved hypothetical proteinchromosome CDS546886 984 - 0.310976
NA PMM1189 conserved hypothetical proteinchromosome CDS1135214 1080 + 0.323148
NA PMM0718 possible Bacterial regulatory proteins, crp fachromosome CDS682867 537 + 0.208566
NA PMM0635 small mechanosensitive ion channel, MscS familychromosome CDS603999 1032 - 0.271318
NA PMM1211 possible polysaccharide export or synthesis proteinchromosome CDS1160596 1167 + 0.263068
NA PMM1041 conserved hypothetical proteinchromosome CDS984821 585 + 0.292308
NA PMM1227 putative UDP-N-acetylglucosamine-1-phosphate transferasechromosome CDS1178446 978 - 0.269939
NA PMM0097 possible RND family outer membrane efflux proteinchromosome CDS99535 1431 - 0.263452
NA PMM1497 Glycosyl transferase, family 2chromosome CDS1435827 1092 + 0.279304
NA PMM0752 Glycosyl transferase, family 2chromosome CDS712410 918 + 0.308279
NA PMM1197 conserved hypothetical proteinchromosome CDS1143639 1362 + 0.26138
NA PMM1260 Nucleoside-diphosphate-sugar epimerasechromosome CDS1213939 936 + 0.307692
NA PMM1177 conserved hypothetical proteinchromosome CDS1124366 1806 - 0.326135
NA PMM1259 pyridoxal-phosphate-dependent aminotransferasechromosome CDS1212680 1167 + 0.311911
NA PMM0797 possible mRNA binding proteinchromosome CDS757849 921 + 0.273616
NA PMM0866 possible SMC domain N terminal domainchromosome CDS822421 489 - 0.210634
NA PMM0330 possible LysM domainchromosome CDS319348 762 - 0.249344
NA PMM1178 Glycosyl transferases group 1chromosome CDS1126168 1095 - 0.319635
NA PMM1200 Glycosyl transferase, family 2chromosome CDS1148064 954 - 0.309224
NA PMM0152 Putative sugar-phosphate nucleotidyl transferasechromosome CDS149447 1179 + 0.347752
NA PMM0059 conserved hypothetical proteinchromosome CDS64160 1290 - 0.289922
NA PMM1496 Dolichyl-phosphate-mannose-proteinmannosyltransferasechromosome CDS1434244 1548 + 0.264858
NA PMM1202 possible nucleoside-diphosphate-sugar epimerasechromosome CDS1150171 855 - 0.290058
NA PMM0761 putative carboxypeptidasechromosome CDS724669 732 + 0.286885
NA PMM1213 Glycosyl transferases group 1chromosome CDS1162468 1161 - 0.242033
NA PMM0616 Cell wall hydrolase/autolysinchromosome CDS586724 1089 + 0.331497
NA PMM1223 putative glycosyl transferase, group 1chromosome CDS1172611 1149 + 0.246301
NA PMM1201 Putative CDP-tyvelose-2-epimerase (RfbE)chromosome CDS1149095 1050 - 0.300952
NA PMM0563 conserved hypothetical proteinchromosome CDS530222 684 - 0.27193
NA PMM1258 pyridoxal-phosphate-dependent aminotransferasechromosome CDS1211578 1149 + 0.319408
NA PMM0962 possible Vng0271cchromosome CDS920161 1227 + 0.335778
NA PMM1256 putative glycosyl transferase, family 2chromosome CDS1209114 879 - 0.287827
NA PMM1377 similar to dihydroflavonol-4-reductasechromosome CDS1324267 996 + 0.341365
NA PMM0040 Putative penicillin-binding proteinchromosome CDS38231 1791 + 0.315466
NA PMM1518 conserved hypothetical proeinchromosome CDS1458799 756 + 0.260582
NA PMM1522 Glycosyl transferase, family 2chromosome CDS1460832 963 - 0.29595
NA PMM0427 putative penicillin binding proteinchromosome CDS406258 1764 - 0.276077
NA PMM1210 Putative nucleotide sugar epimerasechromosome CDS1159390 1026 - 0.308967
NA PMM1220 putative glycosyl transferasechromosome CDS1169558 960 + 0.246875
NA PMM1139 possible membrane fusion proteinchromosome CDS1089194 1062 + 0.305085
NA PMM1238 conserved hypothetical proteinchromosome CDS1189454 1008 + 0.234127
NA PMM1205 NDP-hexose 3,4-dehydratasechromosome CDS1152958 1200 - 0.305833
NA PMM1216 Putative sugar-phosphate nucleotidyl transferasechromosome CDS1165667 720 + 0.268056
NA PMM0757 D-ala-D-ala dipeptidasechromosome CDS718507 687 + 0.30131
NA PMM1292 possible apolipoprotein n-acyltransferasechromosome CDS1243947 1491 - 0.307847
NA PMM1221 Glycosyl transferase, group 1chromosome CDS1170519 1101 + 0.258856
NA PMM0647 conserved hypothetical proteinchromosome CDS617617 258 + 0.25969
NA PMM1219 putative nucleoside-diphosphate sugar epimerasechromosome CDS1168587 948 + 0.290084
NA PMM0029 conserved hypothetical proteinchromosome CDS29363 888 - 0.298423
NA PMM1257 possible dTDP-glucose 4,6-dehydratasechromosome CDS1210385 990 - 0.287879
NA PMM1222 possible glycosyl transferasechromosome CDS1171619 984 + 0.239837
NA PMM1659 Glycosyl transferase, family 2chromosome CDS1591512 1302 - 0.301843
NA PMM1254 putative glycosyl transferase, family 2chromosome CDS1206280 975 - 0.290256
alr PMM1527 putative Alanine racemasechromosome CDS1469701 1188 - 0.309764
ctpA PMM0324 carboxyl-terminal processing proteinase precursorchromosome CDS308446 1290 - 0.345736
dacB, pbp PMM0885 putative D-Ala-D-Ala carboxypeptidase 3 (S13) familychromosome CDS845218 972 - 0.264403
dapA PMM1653 Dihydrodipicolinate synthetasechromosome CDS1584044 909 - 0.366337
ddhA, rfbF PMM1204 glucose-1-phosphate cytidylyltransferasechromosome CDS1152143 768 - 0.348958
ddlA PMM1306 D-alanine--D-alanine ligasechromosome CDS1259813 1068 + 0.291198
degT PMM0284 putative pleiotropic regulatory proteinchromosome CDS273321 1206 + 0.309287
dgkA PMM0183 Prokaryotic diacylglycerol kinasechromosome CDS175302 417 + 0.2494
ftsI PMM0518 putative peptidoglycan synthetase (pbp transpeptidase domain)chromosome CDS488884 1752 + 0.320776
galE PMM1209 UDP-glucose-4-epimerasechromosome CDS1158248 1092 - 0.28663
gidB PMM1475 putative glucose inhibited division protein Bchromosome CDS1408674 720 + 0.281944
glmS PMM1606 Glutamine--fructose-6-phosphate transaminase (isomerizing)chromosome CDS1535851 1896 - 0.327532
glmU PMM0611 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS581401 1350 - 0.305926
gmd PMM1208 GDPmannose 4,6-dehydratasechromosome CDS1157069 1074 - 0.328678
gumB PMM1224 putative polysaccharide export proteinchromosome CDS1174288 1056 - 0.283144
lepA PMM0420 GTP-binding protein LepAchromosome CDS398179 1809 + 0.341625
lpxA PMM1335 UDP-N-acetylglucosamine acyltransferasechromosome CDS1285386 843 - 0.313167
lpxB PMM1334 Lipid-A-disaccharide synthetasechromosome CDS1284211 1179 - 0.289228
lpxC PMM1337 UDP-3-0-acyl N-acetylglucosamine deacetylasechromosome CDS1286697 837 - 0.317802
lpxD PMM0787 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS748841 1035 - 0.298551
lytB PMM0264 LytB protein homologchromosome CDS254182 1197 + 0.319967
menC PMM0175 putative O-succinylbenzoate synthasechromosome CDS168789 966 - 0.281574
mraY PMM1709 Putativephospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS1646698 1080 + 0.25
mreC PMM1621 putative rod shape-determining proteinchromosome CDS1550453 750 - 0.310667
murB PMM0021 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS21634 891 - 0.294052
murC PMM0022 Probable UDP-N-acetylmuramate-alanine ligasechromosome CDS22532 1422 - 0.26301
murD PMM1364 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS1311601 1422 + 0.291842
murE PMM0413 UDP-N-acetylmuramyl-tripeptide synthetasechromosome CDS391211 1536 + 0.295573
murF PMM0610 Cytoplasmic peptidoglycan synthetasechromosome CDS580028 1371 + 0.272794
murG PMM0197 Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferasechromosome CDS190852 1095 + 0.261187
murI PMM0617 Putative aspartate and glutamate racemases:Glutamate racemasechromosome CDS587809 795 + 0.262893
putative murA PMM1300 UDP-N-glucosamine 1-carboxyvinyltransferasechromosome CDS1251103 1374 + 0.329694
rfaE PMM1218 putative ADP-heptose synthasechromosome CDS1167016 1503 + 0.301397
rfbD PMM1233 putative dTDP-4-dehydrorhamnose reductasechromosome CDS1185213 840 + 0.233333
rfbG PMM1203 CDP-glucose 4,6-dehydratasechromosome CDS1151041 1083 - 0.297322
som PMM0709 possible porinchromosome CDS674137 1359 - 0.395879
sps PMM1711 Sucrose phosphate synthasechromosome CDS1647967 1407 - 0.314144
sqdB PMM1665 sulfolipid (UDP-sulfoquinovose) biosynthesis proteinchromosome CDS1596609 1194 + 0.340871
sqdX PMM1666 SqdXchromosome CDS1597831 1134 + 0.361552
ugd PMM1261 UDP-glucose 6-dehydrogenasechromosome CDS1214864 1425 + 0.30807
ycf39 PMM1152 putative chaperon-like protein for quinone binding in photosystem IIchromosome CDS1103512 963 - 0.340602
ycf39 PMM0801 conserved hypothetical proteinchromosome CDS760257 660 - 0.293939
yvoC, lgt, umpA PMM0460 putative prolipoprotein diacylglyceryl transferasechromosome CDS438912 894 - 0.287472