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2024-05-13 23:06:53

Gene list

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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome 2

Number of genes found: 73

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio parahaemolyticus RIMD 2210633, O3:K6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VPA0017 conserved hypothetical proteinchromosome 2 CDS14499 1269 + 0.496454
VPA0096 outer membrane protein OmpWchromosome 2 CDS87986 645 + 0.435659
VPA0155 TonB2 proteinchromosome 2 CDS150688 621 + 0.476651
VPA0166 putative outer membrane proteinchromosome 2 CDS159295 1050 + 0.459048
VPA0223 putative HlyD family secretion proteinchromosome 2 CDS225024 1176 + 0.482143
VPA0225 putative efflux pump channel proteinchromosome 2 CDS228168 1389 + 0.480202
VPA0248 putative outer membrane protein OmpAchromosome 2 CDS252218 978 + 0.45092
VPA0260 hypothetical proteinchromosome 2 CDS263365 747 - 0.453815
VPA0272 putative flagellar proteinchromosome 2 CDS271942 540 + 0.492593
VPA0316 putative outer membrane proteinchromosome 2 CDS314632 615 + 0.442276
VPA0318 putative outer membrane protein OmpVchromosome 2 CDS317154 777 - 0.460746
VPA0320 putative lipoproteinchromosome 2 CDS318146 525 - 0.455238
VPA0325 hypothetical proteinchromosome 2 CDS320023 867 - 0.482122
VPA0329 putative muconate cycloisomerase Ichromosome 2 CDS323611 993 - 0.512588
VPA0343 putative membrane fusion proteinchromosome 2 CDS333655 1158 + 0.481002
VPA0356 putative glycine betaine transporterchromosome 2 CDS347734 1620 - 0.490741
VPA0362 putative outer membrane proteinchromosome 2 CDS355443 1503 - 0.499667
VPA0364 putative efflux proteinchromosome 2 CDS360015 1122 - 0.491979
VPA0393 hypothetical proteinchromosome 2 CDS390965 1326 + 0.422323
VPA0394 hypothetical proteinchromosome 2 CDS392292 1038 + 0.415222
VPA0426 TonB-like proteinchromosome 2 CDS418049 744 - 0.481183
VPA0444 hypothetical proteinchromosome 2 CDS435391 534 + 0.460674
VPA0470 putative multidrug efflux system transmembrane proteinchromosome 2 CDS467580 1143 + 0.469816
VPA0481 putative cation efflux system transmembrane proteinchromosome 2 CDS483621 1716 - 0.503497
VPA0482 putative outer membrane cation efflux proteinchromosome 2 CDS485440 1380 - 0.481884
VPA0490 putative membrane proteinchromosome 2 CDS495719 948 - 0.503165
VPA0517 conserved hypothetical proteinchromosome 2 CDS522502 1284 + 0.45405
VPA0526 putative OmpUchromosome 2 CDS530997 972 - 0.454733
VPA0527 outer membrane protein N, non-specific porinchromosome 2 CDS532581 1050 + 0.477143
VPA0548 putative protein F-related proteinchromosome 2 CDS549139 627 + 0.491228
VPA0557 hypothetical proteinchromosome 2 CDS555769 747 + 0.445783
VPA0558 conserved hypothetical proteinchromosome 2 CDS556556 1230 + 0.462602
VPA0559 conserved hypothetical proteinchromosome 2 CDS557775 1236 + 0.470874
VPA0731 hypothetical proteinchromosome 2 CDS761535 564 + 0.374113
VPA0788 putative outer membrane phospholipase A precursorchromosome 2 CDS815391 939 + 0.454739
VPA0807 putative multidrug resistance proteinchromosome 2 CDS836187 1086 + 0.457643
VPA0808 putative periplasmic linker proteinchromosome 2 CDS837272 1062 + 0.467985
VPA0810 hypothetical proteinchromosome 2 CDS841461 576 - 0.460069
VPA0879 UDP-glucose 4-epimerasechromosome 2 CDS923204 1017 + 0.455261
VPA0886 D-alanine-D-alanine ligasechromosome 2 CDS931443 990 + 0.40404
VPA0943 putative AcrA/AcrE family proteinchromosome 2 CDS976070 1056 - 0.484848
VPA0953 putative biofilm-associated surface proteinchromosome 2 CDS988198 7014 - 0.499857
VPA0954 agglutination proteinchromosome 2 CDS995564 1314 + 0.428463
VPA0955 putative outer membrane proteinchromosome 2 CDS996853 648 + 0.424383
VPA1001 putative alanine racemasechromosome 2 CDS1055082 1230 + 0.458537
VPA1018 lipoprotein Blcchromosome 2 CDS1071695 522 - 0.438697
VPA1133 putative integral membrane proteinchromosome 2 CDS1198781 867 - 0.442907
VPA1186 outer membrane protein OmpAchromosome 2 CDS1255977 990 + 0.455556
VPA1191 putative multidrug efflux membrane fusion proteinchromosome 2 CDS1263335 1128 - 0.487589
VPA1279 diacylglycerol kinasechromosome 2 CDS1358211 357 + 0.462185
VPA1296 D-alanyl-D-alanine carboxypeptidasechromosome 2 CDS1372228 1170 - 0.447863
VPA1353 putative outer membrane proteinchromosome 2 CDS1421773 807 - 0.389095
VPA1403 putative capsular polysaccharide biosynthesis glycosyltransferasechromosome 2 CDS1475072 1401 + 0.463954
VPA1405 putative polysaccharide export-related proteinchromosome 2 CDS1477701 534 + 0.417603
VPA1406 putative exopolysaccharide biosynthesis proteinchromosome 2 CDS1478234 1785 + 0.426891
VPA1408 putative lipopolysaccharide biosynthesis proteinchromosome 2 CDS1481218 1056 + 0.465909
VPA1409 hypothetical proteinchromosome 2 CDS1482239 1233 + 0.430657
VPA1411 putative glycosyltransferasechromosome 2 CDS1484320 1032 + 0.453488
VPA1439 hypothetical proteinchromosome 2 CDS1517818 870 - 0.447126
VPA1440 hypothetical proteinchromosome 2 CDS1518749 906 - 0.458057
VPA1443 putative protein secretion proteinchromosome 2 CDS1535435 1341 - 0.441462
VPA1501 putative membrane proteinchromosome 2 CDS1605097 1098 + 0.462659
VPA1539 putative sodium-type flagellar protein MotY precursorchromosome 2 CDS1641237 1023 - 0.424242
VPA1564 hypothetical proteinchromosome 2 CDS1661034 945 + 0.458201
VPA1579 putative outer membrane proteinchromosome 2 CDS1676409 1644 + 0.506083
VPA1594 D-alanyl-D-alanine carboxypeptidasechromosome 2 CDS1690967 1158 - 0.488774
VPA1602 capsular polysaccharide transport proteinchromosome 2 CDS1700697 1122 + 0.434938
VPA1604 putative tyrosine kinasechromosome 2 CDS1702361 2160 + 0.406019
VPA1617 putative transglycosylasechromosome 2 CDS1716371 678 - 0.455752
VPA1649 putative TagE proteinchromosome 2 CDS1761120 954 + 0.469602
VPA1733 secretion protein, HlyD familychromosome 2 CDS1852833 1392 + 0.474856
VPA1737 putative hypothetical proteinchromosome 2 CDS1859577 594 + 0.434343
VPA1745 putative outer membrane proteinchromosome 2 CDS1867095 1056 + 0.470644