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2024-05-19 05:59:55

Gene list

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COG category: Cell wall/membrane biogenesis
Genomic element: chromosome

Number of genes found: 205

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Methylococcus capsulatus str. Bath, Bath
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA MCA2624 lipoprotein ABC transporter, permease protein LolEchromosome CDS2810105 1248 + 0.645833
NA MCA0626 putative polysaccharide efflux ABC-transporter, permease proteinchromosome CDS662275 828 - 0.596618
NA MCA0118 glycosyl transferase, group 2 family proteinchromosome CDS123533 1044 - 0.675287
NA MCA1017 nucleoside diphosphate sugar epimerase family proteinchromosome CDS1068621 987 + 0.674772
NA MCA2241 glycosyl transferase, group 1 familychromosome CDS2432232 1002 - 0.647705
NA MCA2533 carboxyl-terminal proteasechromosome CDS2708760 1326 - 0.613122
NA MCA2028 putative membrane-bound lytic murein transglycosylasechromosome CDS2176844 1689 - 0.600355
NA MCA2425 putative cell division protein FtsQchromosome CDS2602827 822 - 0.643552
NA MCA0668 TonB domain proteinchromosome CDS700511 582 + 0.713058
NA MCA2329 putative outer membrane efflux family proteinchromosome CDS2523781 1008 - 0.669643
NA MCA1071 conserved hypothetical proteinchromosome CDS1126125 942 + 0.607219
NA MCA1403 membrane-bound lytic murein transglycosylasechromosome CDS1489271 1206 - 0.637645
NA MCA1434 glycosyl transferase, group 2 family proteinchromosome CDS1525682 1191 + 0.677582
NA MCA1439 conserved domain proteinchromosome CDS1530894 1464 + 0.678962
NA MCA1173 putative membrane proteinchromosome CDS1227095 1374 + 0.608442
NA MCA1936 putative transporterchromosome CDS2084480 1050 - 0.630476
NA MCA0149 chain length determinant proteinchromosome CDS155447 1419 + 0.65821
NA MCA0284 outer membrane efflux family proteinchromosome CDS269243 1557 - 0.638407
NA MCA0441 TonB domain proteinchromosome CDS452874 747 + 0.690763
NA MCA2816 outer membrane efflux family proteinchromosome CDS3008109 1449 + 0.6853
NA MCA2547 glycosyl transferase, group 1 family proteinchromosome CDS2727052 1191 - 0.597817
NA MCA0374 glycosyl transferase, group 2 family proteinchromosome CDS377637 732 + 0.661202
NA MCA2184 outer membrane lipoprotein, Slp familychromosome CDS2356275 615 - 0.627642
NA MCA0140 glycosyl transferase, group 2 familychromosome CDS145748 735 + 0.654422
NA MCA2789 NLP/P60 family proteinchromosome CDS2980594 546 - 0.653846
NA MCA1826 conserved domain proteinchromosome CDS1955656 1326 - 0.645551
NA MCA1297 efflux transporter, RND family, MFP subunitchromosome CDS1382943 1212 + 0.655941
NA MCA1433 glycosyl transferase, group 1 family proteinchromosome CDS1524434 1230 + 0.658537
NA MCA0997 putative membrane proteinchromosome CDS1043235 1932 - 0.637681
NA MCA2449 capsular polysaccharide biosynthesis protein Ichromosome CDS2630263 1011 + 0.620178
NA MCA0215 aminotransferase, DegT/DnrJ/EryC1/StrS familychromosome CDS215944 1155 + 0.644156
NA MCA2562 glycosyl transferase, group 1 family proteinchromosome CDS2743576 1737 + 0.494531
NA MCA1158 glycosyl transferase, group 2 familychromosome CDS1213675 855 + 0.576608
NA MCA3044 SIS domain proteinchromosome CDS3230923 534 + 0.606742
NA MCA0747 putative rare lipoprotein Achromosome CDS785596 408 + 0.593137
NA MCA0399 aminotransferase, DegT/DnrJ/EryC1/StrS familychromosome CDS402636 1095 + 0.648402
NA MCA2713 putative lipopolysaccharide heptosyltransferase-1chromosome CDS2899912 1050 + 0.66381
NA MCA1133 putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferasechromosome CDS1190416 1218 - 0.642036
NA MCA0177 conserved hypothetical proteinchromosome CDS187233 1221 - 0.595414
NA MCA2561 glycosyl transferase, group 2 family proteinchromosome CDS2740479 2874 + 0.546277
NA MCA0105 D-alanyl-D-alanine carboxypeptidasechromosome CDS112342 1179 + 0.633588
NA MCA1429 chain length determinant proteinchromosome CDS1519457 2121 - 0.641207
NA MCA2125 aminotransferase, DegT/DnrJ/EryC1/StrS familychromosome CDS2285647 1182 - 0.681049
NA MCA1768 putative outer membrane heavy metal efflux proteinchromosome CDS1899170 1305 + 0.64751
NA MCA1054 putative outer membrane lipoprotein LolBchromosome CDS1105580 609 + 0.617406
NA MCA0625 putative polysaccharide efflux ABC transporter, ATP-binding proteinchromosome CDS661019 1254 - 0.549442
NA MCA0903 polysaccharide biosynthesis proteinchromosome CDS947706 1848 + 0.630952
NA MCA2126 glycosyl transferase, group 1 family proteinchromosome CDS2287047 1101 + 0.694823
NA MCA3093 glycosyl transferase, group 2 family proteinchromosome CDS3279169 2040 - 0.615196
NA MCA1937 outer membrane efflux proteinchromosome CDS2085540 1386 - 0.652237
NA MCA1178 putative exopolysaccharide export protein, interruption-Cchromosome CDS1232830 1584 + 0.621212
NA MCA2236 putative TonB-dependent receptorchromosome CDS2428226 663 - 0.651584
NA MCA2193 glycosyl transferase, group 2 familychromosome CDS2367865 963 - 0.603323
NA MCA1437 bacterial sugar transferase/glycosyl transferase, WecB/TagA/CpsF family proteinchromosome CDS1528353 1317 + 0.639332
NA MCA2414 glycosyl transferase, group 1 family domain proteinchromosome CDS2590636 1083 + 0.662973
NA MCA3074 putative alginate O-acetyltransferasechromosome CDS3258088 1548 - 0.631783
NA MCA2998 conserved domain proteinchromosome CDS3171966 369 + 0.623306
NA MCA0621 glycosyl transferase, group 2 family proteinchromosome CDS656659 1104 - 0.616848
NA MCA2337 putative TonB-dependent receptorchromosome CDS2531081 840 - 0.669048
NA MCA1160 glycosyl transferase, group 1 family proteinchromosome CDS1215582 1152 + 0.554688
NA MCA1176 putative exopolysaccharide export protein, interruption-Nchromosome CDS1230671 954 + 0.621593
NA MCA0554 HlyD family secretion proteinchromosome CDS582796 966 + 0.674948
NA MCA2436 S-adenosyl-methyltransferase MraWchromosome CDS2615169 906 - 0.654525
NA MCA2262 outer membrane heavy metal efflux proteinchromosome CDS2456492 1281 + 0.672912
NA MCA1153 glycosyl transferase, group 1 family proteinchromosome CDS1208576 1131 + 0.624226
NA MCA3050 SIS domain proteinchromosome CDS3237605 534 + 0.606742
NA MCA1721 efflux transporter, RND family, MFP subunitchromosome CDS1837165 1296 + 0.635031
NA MCA0622 glycosyl transferase, group 2 family proteinchromosome CDS657817 1026 - 0.572125
NA MCA2415 glycosyl transferase, group 1 familychromosome CDS2591726 1125 - 0.656889
NA MCA1596 multidrug efflux system, HlyD family subunitchromosome CDS1701580 1116 + 0.654122
NA MCA1432 glycosyl transferase, group 1 family proteinchromosome CDS1523154 1284 + 0.661215
NA MCA1427 glycosyl transferase, group 2 family proteinchromosome CDS1517393 1017 - 0.656834
NA MCA0618 glycosyl transferase, group 1 family proteinchromosome CDS652744 1101 - 0.646685
NA MCA1508 glycosyl transferase, group 2 familychromosome CDS1606779 1053 + 0.449193
NA MCA0620 glycosyl transferase, group 2 family proteinchromosome CDS654800 1833 - 0.639935
NA MCA2153 HlyD family secretion proteinchromosome CDS2319580 1080 - 0.716667
NA MCA1672 putative penicillin-binding proteinchromosome CDS1775563 2280 + 0.627632
NA MCA1230 OmpA family proteinchromosome CDS1296548 648 + 0.62963
NA MCA0534 hypothetical proteinchromosome CDS550891 1143 + 0.656168
NA MCA2549 efflux ABC transporter, ATP-binding proteinchromosome CDS2729655 1248 - 0.630609
NA MCA1810 conserved hypothetical proteinchromosome CDS1941893 981 + 0.654434
NA MCA1168 putative colanic acid biosynthesis glycosyl transferasechromosome CDS1224479 1215 + 0.683128
NA MCA0080 hypothetical proteinchromosome CDS84017 903 - 0.684385
NA MCA1296 N-acetylmuramoyl-L-alanine amidase, family 3chromosome CDS1381528 1347 - 0.657758
NA MCA0540 conserved hypothetical proteinchromosome CDS555703 942 + 0.684713
NA MCA0154 glycosyl transferase, group 1 family proteinchromosome CDS162081 1083 + 0.6759
NA MCA1513 conserved hypothetical proteinchromosome CDS1613878 699 - 0.569385
NA MCA1834 putative chloromuconate cycloisomerasechromosome CDS1962237 1071 + 0.677871
NA MCA2608 mechanosensitive ion channel family proteinchromosome CDS2796587 2478 + 0.655367
NA MCA2326 conserved domain proteinchromosome CDS2522120 369 - 0.607046
NA MCA1162 putative alginate O-acetyltransferasechromosome CDS1218278 1464 + 0.57582
NA MCA0148 putative capsular polysaccharide export proteinchromosome CDS154610 834 + 0.66187
NA MCA2325 efflux transporter, RND family, MFP subunitchromosome CDS2520954 1170 - 0.642735
NA MCA2447 outer membrane protein, OMP85 familychromosome CDS2626863 2391 - 0.560435
NA MCA1288 N-acetylmuramoyl-L-alanine amidase domain/peptidoglycan binding domain proteinchromosome CDS1373904 1854 - 0.644552
NA MCA1595 multidrug efflux system outer membrane subunitchromosome CDS1699953 1563 + 0.664108
NA MCA0979 putative transporterchromosome CDS1023769 762 - 0.629921
NA MCA1497 glycosyl transferase, group 2 family proteinchromosome CDS1595293 768 + 0.645833
NA MCA0176 outer membrane efflux proteinchromosome CDS185617 1611 - 0.621353
NA MCA1165 NAD-dependent epimerase/dehydratase family proteinchromosome CDS1222207 963 + 0.558671
NA MCA2132 HlyD family secretion proteinchromosome CDS2296643 1083 - 0.679594
NA MCA1159 glycosyl transferase, group 1 family proteinchromosome CDS1214533 1041 + 0.57829
NA MCA1277 putative outer membrane protein TolCchromosome CDS1360555 1440 - 0.660417
NA MCA0439 TonB domain proteinchromosome CDS449378 648 + 0.728395
NA MCA1576 putative penicillin-binding proteinchromosome CDS1673971 2142 + 0.668534
NA MCA1632 mechanosensitive ion channel family proteinchromosome CDS1734319 2349 + 0.650064
NA MCA2230 efflux transporter, RND family, MFP subunitchromosome CDS2419226 1089 + 0.46832
NA MCA1766 putative heavy metal efflux system proteinchromosome CDS1894931 1131 + 0.665783
NA MCA0599 nucleotidyltransferase family proteinchromosome CDS631703 699 - 0.686695
NA MCA1430 putative capsular polysaccharide export proteinchromosome CDS1521588 1002 - 0.632735
NA MCA2263 putative heavy metal efflux pump membrane fusion proteinchromosome CDS2457769 1269 + 0.681639
NA MCA1361 HlyD family secretion proteinchromosome CDS1449325 1164 - 0.646907
NA MCA2232 outer membrane efflux family proteinchromosome CDS2423503 1428 + 0.489496
NA MCA2738 putative hexulose-6-phosphate synthase/SIS domain proteinchromosome CDS2929677 1170 - 0.639316
NA MCA2512 acid phosphatasechromosome CDS2688630 1521 + 0.661407
NA MCA1228 putative TolA proteinchromosome CDS1293845 1404 + 0.66453
NA MCA0471 dolichyl-phosphate-mannose-protein mannosyltransferase family proteinchromosome CDS487376 1752 + 0.66895
NA MCA0981 putative lipoproteinchromosome CDS1025862 396 - 0.659091
NA MCA0601 putative organic solvent tolerance proteinchromosome CDS633482 3276 + 0.622405
NA MCA2111 hypothetical proteinchromosome CDS2270530 390 - 0.582051
NA MCA1723 outer membrane efflux proteinchromosome CDS1841631 1311 + 0.62624
NA MCA0147 putative polysaccharide biosythesis proteinchromosome CDS153160 1395 + 0.605735
NA MCA0288 transglycosylase SLT domain proteinchromosome CDS279607 1233 + 0.665045
NA MCA0902 glycosyl transferase, group 4 family proteinchromosome CDS946878 825 + 0.660606
NA MCA1428 glycosyl transferase, group 1 family proteinchromosome CDS1518402 1059 - 0.65628
NA MCA1362 outer membrane efflux family proteinchromosome CDS1450622 1677 - 0.636852
NA MCA0574 putative membrane-associated zinc metalloproteasechromosome CDS603214 1254 + 0.661882
NA MCA2972 rare lipoprotein A domain proteinchromosome CDS3147067 432 - 0.604167
NA MCA1690 penicillin-insensitive murein endopeptidase, truncationchromosome CDS1807827 840 + 0.67381
NA MCA2550 efflux ABC-transporter, permease proteinchromosome CDS2730899 783 - 0.601533
NA MCA2154 putative outer membrane protein CyaEchromosome CDS2320683 1362 - 0.657856
NA MCA2446 putative outer membrane protein OmpHchromosome CDS2626198 507 - 0.564103
NA MCA2124 putative colanic acid biosynthesis glycosyl transferasechromosome CDS2284446 1176 - 0.658163
NA MCA1423 glycosyl transferase, family 25chromosome CDS1511745 720 - 0.65
NA MCA2390 putative prolipoprotein diacylglyceryl transferasechromosome CDS2571338 738 + 0.657182
NA MCA2718 conserved hypothetical proteinchromosome CDS2906568 1170 + 0.607692
NA MCA0708 glycosyl transferase, group 2 family proteinchromosome CDS745897 1815 + 0.64573
NA MCA0152 glycosyl transferase, group 1 family proteinchromosome CDS159293 1212 + 0.680693
NA MCA1166 glycosyl transferase, group 2 family proteinchromosome CDS1223169 894 + 0.538031
NA MCA2008 transglycosylase SLT domain proteinchromosome CDS2154890 645 - 0.626357
NA MCA0541 glycosyl transferase, group 1 familychromosome CDS556567 1047 - 0.69341
NA MCA2719 putative heavy metal efflux system proteinchromosome CDS2907734 1098 + 0.639344
NA MCA2814 efflux transporter, RND family, MFP subunitchromosome CDS3003879 1113 + 0.697215
NA MCA0672 putative lipoproteinchromosome CDS703186 708 + 0.64548
NA MCA0613 glycosyl transferase, group 1 family proteinchromosome CDS647845 1026 - 0.691033
NA MCA2115 transglycosylase SLT domain proteinchromosome CDS2274310 1206 + 0.665837
NA MCA2110 outer membrane efflux proteinchromosome CDS2269135 1314 + 0.584475
NA MCA1175 polysaccharide biosynthesis/export proteinchromosome CDS1230177 459 + 0.6122
NA MCA0093 ABC transporter, ATP-binding family proteinchromosome CDS97563 1221 + 0.655201
NA MCA2619 putative D-alanyl-D-alanine carboxypeptidasechromosome CDS2805688 1089 - 0.636364
NA MCA1179 putative capsular polysaccharide biosynthesis proteinchromosome CDS1234480 726 + 0.639118
alr MCA1734 alanine racemasechromosome CDS1850205 1080 - 0.662037
cfa MCA2223 cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS2401032 1158 + 0.641623
cutE MCA1455 apolipoprotein N-acyltransferasechromosome CDS1546705 1515 - 0.636304
dapA MCA0671 dihydrodipicolinate synthasechromosome CDS702300 876 + 0.666667
ddL MCA2426 D-alanine--D-alanine ligasechromosome CDS2603618 930 - 0.644086
dgkA MCA0048 diacylglycerol kinasechromosome CDS47616 363 - 0.61157
fcl MCA1147 GDP-L-fucose synthetasechromosome CDS1203509 969 + 0.649123
ftsI MCA2434 penicillin-binding protein 3chromosome CDS2613158 1728 - 0.622106
galE-1 MCA0612 UDP-glucose 4-epimerasechromosome CDS646874 975 - 0.699487
galE-2 MCA2451 UDP-glucose 4-epimerasechromosome CDS2631826 1026 + 0.639376
galU MCA2203 UTP-glucose-1-phosphate uridylyltransferasechromosome CDS2380159 879 - 0.62116
gidB MCA0002 glucose-inhibited division protein Bchromosome CDS1936 618 + 0.656958
glmS MCA0015 glucosamine--fructose-6-phosphate aminotransferase, isomerizingchromosome CDS12615 1833 + 0.667212
glmU MCA0014 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS11242 1386 + 0.645022
gmd MCA1146 GDP-mannose 4,6-dehydratasechromosome CDS1202384 1119 + 0.622878
ispH MCA1815 hydroxymethylbutenyl pyrophosphate reductasechromosome CDS1947649 942 + 0.626327
kdsA MCA2514 3-deoxy-8-phosphooctulonate synthasechromosome CDS2692207 759 + 0.648221
kdsB MCA0635 3-deoxy-D-manno-octulosonatecytidylyltransferasechromosome CDS670473 774 + 0.700258
kdtA MCA2034 3-deoxy-D-manno-octulosonic-acid transferasechromosome CDS2182690 1278 - 0.647887
lepA MCA1466 GTP-binding protein LepAchromosome CDS1556166 1806 - 0.604097
lgt MCA2727 prolipoprotein diacylglyceryl transferasechromosome CDS2921026 789 + 0.622307
lolA MCA1783 outer membrane lipoprotein carrier protein LolAchromosome CDS1913421 627 - 0.62201
lpxA-1 MCA0397 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferasechromosome CDS400872 783 + 0.673052
lpxA-2 MCA2444 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferasechromosome CDS2624940 795 - 0.593711
lpxB MCA0400 lipid A disaccharide synthase (lpxB)chromosome CDS403723 1155 + 0.65974
lpxC MCA2422 UDP-3-0-acyl N-acetylglucosamine deacetylasechromosome CDS2599214 915 - 0.606557
lpxD MCA2588 UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferasechromosome CDS2771762 1065 + 0.659155
lpxK MCA0633 tetraacyldisaccharide 4'-kinasechromosome CDS669270 1011 + 0.683482
lspA MCA2254 signal peptidase IIchromosome CDS2444870 477 + 0.63522
mltB MCA2114 membrane-bound lytic transglycosylase Bchromosome CDS2273116 1122 - 0.651515
mopB MCA3103 outer membrane protein MopBchromosome CDS3289936 1047 - 0.590258
mpl MCA0158 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligasechromosome CDS169485 1365 - 0.661538
mraY MCA2432 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS2610523 1083 - 0.573407
mrcA MCA0324 penicillin-binding protein 1Achromosome CDS317896 2493 - 0.635379
mrdA MCA0103 penicillin-binding protein 2chromosome CDS109218 1836 + 0.654139
mreC MCA0101 rod shape-determining protein MreCchromosome CDS107807 903 + 0.66113
mreD MCA0102 rod shape-determining protein MreDchromosome CDS108696 492 + 0.654472
murA MCA1965 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS2117209 1266 - 0.636651
murB MCA2427 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS2604570 915 - 0.68306
murC MCA2428 UDP-N-acetylmuramate--alanine ligasechromosome CDS2605481 1419 - 0.651163
murD MCA2431 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS2609138 1380 - 0.658696
murE MCA2433 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligasechromosome CDS2611656 1440 - 0.647222
murF MCA1294 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligasechromosome CDS1379715 1350 - 0.668148
murG MCA2429 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS2606896 1065 - 0.670423
murI MCA1276 glutamate racemasechromosome CDS1359698 816 + 0.666667
rfaE MCA1736 lipopolysaccharide biosynthesis protein RfaEchromosome CDS1852685 1422 - 0.654712
rfbA MCA1283 glucose-1-phosphate thymidylyltransferasechromosome CDS1367020 888 + 0.601351
rfbB MCA1282 dTDP-glucose 4,6-dehydratasechromosome CDS1365950 1074 + 0.61825
rfbC MCA1284 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS1367904 558 + 0.620072
rfbD MCA1285 dTDP-4-dehydrorhamnose reductasechromosome CDS1368458 906 + 0.673289
rlpB MCA1452 rare lipoprotein Bchromosome CDS1542636 519 - 0.595376
ugd MCA2487 UDP-glucose 6-dehydrogenasechromosome CDS2667901 1329 - 0.632807
vacJ MCA2076 vacJ lipoproteinchromosome CDS2235746 855 - 0.622222
vanX MCA2615 D-alanyl-D-alanine dipeptidasechromosome CDS2803125 639 + 0.641628