Gene list
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COG category: Cell wall/membrane biogenesis
Organism: Phage Gifsy-1
Number of genes found: 230
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Phage Gifsy-1 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SC3993 | putative inner membrane protein | chromosome | CDS | 4247800 | 858 | - | 0.467366 |
NA | SC2096 | hypothetical protein | chromosome | CDS | 2188005 | 1008 | - | 0.303571 |
NA | SC2097 | hypothetical protein | chromosome | CDS | 2188996 | 1002 | - | 0.303393 |
NA | SC2693 | putative outer membrane efflux protein | chromosome | CDS | 2856293 | 1410 | + | 0.568794 |
NA | SC4139 | membrane permease, predicted cation efflux pump | chromosome | CDS | 4415797 | 1278 | + | 0.345853 |
NA | SC1945 | putative cell wall-associated hydrolase | chromosome | CDS | 2055590 | 1440 | - | 0.484028 |
NA | SC4138 | putative ABC exporter outer membrane component homolog | chromosome | CDS | 4414481 | 1320 | + | 0.366667 |
NA | SC0288 | putative cytoplasmic protein | chromosome | CDS | 334610 | 354 | + | 0.316384 |
NA | SC0550 | putative outer membrane protein | chromosome | CDS | 614079 | 1134 | + | 0.500882 |
NA | SC2844 | putative nucleoside-diphosphate-sugar epimerase | chromosome | CDS | 3010661 | 951 | - | 0.559411 |
NA | SC3346 | mechanosensitive channel | chromosome | CDS | 3535730 | 414 | + | 0.449275 |
NA | SC3529 | hypothetical protein | chromosome | CDS | 3725471 | 954 | - | 0.362683 |
NA | SC2095 | hypothetical protein | chromosome | CDS | 2186819 | 1233 | - | 0.313058 |
NA | SC4392 | putative glucosamine-fructose-6-phosphate aminotransferase | chromosome | CDS | 4700865 | 1011 | + | 0.515331 |
acrA | SC0518 | acridine efflux pump | chromosome | CDS | 576788 | 1086 | - | 0.551565 |
aefA | SC0519 | putative small-conductance mechanosensitive channel | chromosome | CDS | 578835 | 3423 | + | 0.524394 |
ail | SC0996 | Gifsy-2 prophage attachment and invasion protein-like protein | chromosome | CDS | 1110129 | 498 | + | 0.443775 |
alr | SC4126 | alanine racemase 1, biosynthetic | chromosome | CDS | 4402656 | 1080 | + | 0.587963 |
amiA | SC2449 | N-acetylmuramoyl-l-alanine amidase I | chromosome | CDS | 2576094 | 870 | + | 0.503448 |
amiB | SC4234 | N-acetylmuramoyl-l-alanine amidase II, a murein hydrolase | chromosome | CDS | 4535063 | 1323 | + | 0.577475 |
amiC | SC2929 | N-acetylmuramoyl-L-alanine amidase | chromosome | CDS | 3101049 | 1254 | - | 0.535088 |
asmA | SC2122 | suppressor of ompF assembly mutants | chromosome | CDS | 2217465 | 1857 | - | 0.562736 |
blc | SC4218 | outer membrane lipoprotein (lipocalin) | chromosome | CDS | 4516534 | 534 | - | 0.522472 |
caiT | SC0068 | putative BCCT family, betaine/carnitine/choline transport protein | chromosome | CDS | 80767 | 1518 | - | 0.537549 |
cfa | SC1446 | cyclopropane fatty acyl phospholipid synthase | chromosome | CDS | 1541923 | 1149 | - | 0.48564 |
csgG | SC1087 | putative transcriptional regulator in curly assembly/transport, 2nd curli operon | chromosome | CDS | 1208110 | 834 | - | 0.490408 |
cyaD | SC2695 | putative HlyD family secretion protein | chromosome | CDS | 2859860 | 1191 | + | 0.538203 |
dacA | SC0666 | D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5 | chromosome | CDS | 740948 | 1212 | - | 0.520627 |
dacB | SC3238 | D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 4 | chromosome | CDS | 3423394 | 1434 | + | 0.549512 |
dacC | SC0857 | D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a | chromosome | CDS | 963244 | 1203 | + | 0.537822 |
dacD | SC2071 | DD-carboxypeptidase, penicillin-binding protein 6b | chromosome | CDS | 2157317 | 1173 | - | 0.524297 |
dadX | SC1795 | alanine racemase 2, catabolic | chromosome | CDS | 1916778 | 1071 | - | 0.572362 |
dapA | SC2484 | dihydrodipicolinate synthase | chromosome | CDS | 2617933 | 879 | - | 0.535836 |
ddg | SC2402 | cold shock-induced palmitoleoyl transferase | chromosome | CDS | 2528971 | 918 | + | 0.542484 |
ddlA | SC0421 | D-alanine-D-alanine ligase A | chromosome | CDS | 478036 | 1095 | - | 0.520548 |
ddlB | SC0127 | D-alanine-D-alanine ligase B, affects cell division | chromosome | CDS | 146943 | 921 | + | 0.541802 |
dgkA | SC4115 | diacylglycerol kinase | chromosome | CDS | 4393388 | 369 | + | 0.498645 |
dgoA | SC3751 | putative mandelate racemase / muconate lactonizing enzyme family | chromosome | CDS | 3975623 | 1194 | + | 0.543551 |
dgoA | SC2276 | putative dehydratase protein | chromosome | CDS | 2391040 | 1203 | - | 0.433084 |
dgoA | SC3745 | galactonate dehydratase | chromosome | CDS | 3969642 | 1149 | - | 0.550914 |
dniR | SC0256 | transcriptional regulator for nitrite reductase (cytochrome c552) | chromosome | CDS | 295832 | 1368 | - | 0.519737 |
emtA | SC1792 | membrane-bound lytic murein transglycosylase E | chromosome | CDS | 1913188 | 612 | - | 0.531046 |
fepE | SC0620 | ferric enterobactin (enterochelin) transporter | chromosome | CDS | 692122 | 1164 | + | 0.489691 |
flgJ | SC1129 | flagellar biosynthesis | chromosome | CDS | 1244507 | 951 | + | 0.561514 |
ftsI | SC0119 | division specific transpeptidase, penicillin-binding protein 3 re | chromosome | CDS | 136058 | 1767 | + | 0.548387 |
ftsI | SC1830 | putative penicillin-binding protein-3 | chromosome | CDS | 1948758 | 1746 | - | 0.527491 |
ftsQ | SC0128 | cell division protein; ingrowth of wall at septum | chromosome | CDS | 147865 | 831 | + | 0.524669 |
galE | SC0774 | UDP-galactose 4-epimerase | chromosome | CDS | 869219 | 1017 | - | 0.553589 |
galF | SC2099 | putative glucose-1-phosphate uridylyltransferase (UDP-glucose pyrophosphorylase), non-catalytic subunit | chromosome | CDS | 2191461 | 1023 | - | 0.503421 |
galU | SC1747 | glucose-1-phosphate uridylyltransferase | chromosome | CDS | 1860953 | 909 | - | 0.49725 |
gidB | SC3786 | associate with glucose-inhibited division | chromosome | CDS | 4016227 | 624 | - | 0.514423 |
glmS | SC3774 | L-glutamine:D-fructose-6-phosphateaminotransfera se | chromosome | CDS | 4004093 | 1830 | - | 0.543169 |
glmS | SC4391 | putative glucosamine-fructose-6-phosphate aminotransferase | chromosome | CDS | 4699786 | 1062 | + | 0.52919 |
glmU | SC3775 | N-acetyl glucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyl transferase | chromosome | CDS | 4006111 | 1371 | - | 0.531729 |
gmd | SC2110 | GDP-D-mannose dehydratase in colanic acid gene cluster | chromosome | CDS | 2205077 | 1122 | - | 0.569519 |
gtrB | SC4084 | putative phage glycosyltransferase | chromosome | CDS | 4360611 | 930 | - | 0.435484 |
gtrB | SC0369 | Bactoprenol glucosyl transferase homolog from prop | chromosome | CDS | 411703 | 927 | - | 0.464941 |
gudD | SC2900 | d-glucarate dehydratase | chromosome | CDS | 3070246 | 1341 | - | 0.553318 |
hlpA | SC0225 | histone-like protein, located in outer membrane | chromosome | CDS | 260910 | 486 | + | 0.475309 |
htrB | SC1102 | lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis | chromosome | CDS | 1222669 | 840 | - | 0.539286 |
iagB | SC2809 | cell invasion protein | chromosome | CDS | 2975063 | 483 | + | 0.409938 |
imp | SC0088 | Organic solvent tolerance protein | chromosome | CDS | 100028 | 2361 | - | 0.526895 |
kdsA | SC1766 | 3-deoxy-D-manno-octulosonic acid 8-P synthetase | chromosome | CDS | 1883387 | 855 | - | 0.550877 |
kdsB | SC0945 | CTP:CMP-3-deoxy-D-manno-octulosonate transferase | chromosome | CDS | 1059926 | 747 | + | 0.570281 |
kdtA | SC3647 | 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) | chromosome | CDS | 3861639 | 1278 | + | 0.548513 |
lepA | SC2578 | GTP-binding elongation factor | chromosome | CDS | 2747233 | 1800 | - | 0.525556 |
lgt | SC2941 | phosphatidylglycerol-prolipoprotein diacylglyceryl transferase | chromosome | CDS | 3118511 | 876 | - | 0.538813 |
lmt | SC4096 | putative soluble lytic murein transglycosylase | chromosome | CDS | 4371135 | 606 | - | 0.561056 |
lnt | SC0694 | apolipoprotein N-acyltransferase, copper homeostasis protein, inner membrane | chromosome | CDS | 772706 | 1590 | - | 0.545283 |
lolA | SC0915 | periplasmic protein effects translocation of lipoproteins from inner membrane to outer membrane | chromosome | CDS | 1025518 | 615 | + | 0.497561 |
lolB | SC1772 | outer membrane lipoprotein | chromosome | CDS | 1889004 | 624 | + | 0.560897 |
lpp | SC1398 | murein lipoprotein, links outer and inner membranes | chromosome | CDS | 1497123 | 237 | - | 0.514768 |
lppB | SC1397 | putative methyl-accepting chemotaxis protein | chromosome | CDS | 1496798 | 294 | - | 0.462585 |
lppB | SC1396 | putative methyl-accepting chemotaxis protein | chromosome | CDS | 1496478 | 240 | - | 0.475 |
lpxA | SC0228 | UDP-N-acetylglucosamine acetyltransferase | chromosome | CDS | 262989 | 789 | + | 0.534854 |
lpxB | SC0229 | tetraacyldisaccharide-1-P | chromosome | CDS | 263777 | 1149 | + | 0.558747 |
lpxC | SC0131 | UDP-3-O-acyl N-acetylglucosamine deacetylase | chromosome | CDS | 151267 | 918 | + | 0.509804 |
lpxD | SC0226 | UDP-3-O-(3-hydroxymyristoyl)-glucosaminen-acyltr ansferase | chromosome | CDS | 261399 | 1026 | + | 0.521442 |
lpxK | SC0942 | tetraacyldisaccharide 4' kinase (lipid A 4'kinase) | chromosome | CDS | 1057442 | 978 | + | 0.596115 |
lspA | SC0041 | prolipoprotein signal peptidase (SPase II) | chromosome | CDS | 50943 | 501 | + | 0.528942 |
lytB | SC0043 | regulates the activity of guanosine 3',5'-bispyrophosphate synthetase I (RelA) | chromosome | CDS | 52050 | 951 | + | 0.576236 |
mdoB | SC4393 | phosphoglycerol transferase I | chromosome | CDS | 4702009 | 2292 | - | 0.534031 |
mdoH | SC1098 | membrane glycosyltransferase; synthesis of membrane-derived oligosaccharide (MDO)/synthesis of OPGs (osmoregulated periplasmic glucans) | chromosome | CDS | 1217969 | 2574 | + | 0.562937 |
mepA | SC2385 | murein DD-endopeptidase, penicillin-insensitive | chromosome | CDS | 2508123 | 825 | - | 0.590303 |
mipA | SC1298 | scaffolding protein for murein-synthesizing holoenzyme | chromosome | CDS | 1395812 | 747 | + | 0.508701 |
mltA | SC2928 | membrane-bound lytic murein transglycosylase A | chromosome | CDS | 3099452 | 1098 | - | 0.545537 |
mltB | SC2764 | membrane-bound lytic murein transglycosylase B | chromosome | CDS | 2931388 | 1128 | - | 0.555851 |
mltC | SC3053 | membrane-bound lytic murein transglycosylase C | chromosome | CDS | 3229645 | 1086 | + | 0.518416 |
mpl | SC4290 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | chromosome | CDS | 4594189 | 1374 | + | 0.588064 |
mraY | SC0122 | phospho-N-acetylmuramoyl-pentapeptidetransferase | chromosome | CDS | 140647 | 1083 | + | 0.54109 |
mrcA | SC3425 | transpeptidase of penicillin-binding protein 1a (peptidoglycan synthetase) | chromosome | CDS | 3600119 | 2577 | + | 0.561506 |
mrcB | SC0190 | transpeptidase of penicillin-binding protein 1b (peptidoglycan synthetase) | chromosome | CDS | 217030 | 2523 | + | 0.567182 |
mrdA | SC0670 | cell elongation specific transpeptidase of penicillin-binding protein 2 (peptidoglycan synthetase) | chromosome | CDS | 744570 | 1902 | - | 0.542587 |
mreC | SC3311 | rod shape-determining protein | chromosome | CDS | 3497134 | 1053 | - | 0.592593 |
mreD | SC3310 | rod shape-determining protein | chromosome | CDS | 3496643 | 492 | - | 0.53252 |
msbB | SC1897 | myristoyl transferase in lipid A biosynthesis, suppressor of htrB (lpxL) | chromosome | CDS | 2006570 | 1056 | - | 0.530303 |
mtgA | SC3264 | peptidoglycan transglycosylase, biosynthetic | chromosome | CDS | 3443629 | 729 | - | 0.559671 |
mtrC | SC0394 | putative cation efflux pump | chromosome | CDS | 441597 | 1227 | - | 0.604727 |
murA | SC3245 | UDP-N-acetylglucosamine1-carboxyvinyltransferase | chromosome | CDS | 3429637 | 1260 | - | 0.581746 |
murB | SC4025 | UDP-N-acetylenolpyruvoylglucosamine reductase | chromosome | CDS | 4290689 | 1029 | + | 0.533528 |
murC | SC0126 | L-alanine adding enzyme, UDP-N-acetyl-muramate:alanine ligase | chromosome | CDS | 145475 | 1476 | + | 0.560976 |
murD | SC0123 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | chromosome | CDS | 141732 | 1317 | + | 0.582384 |
murE | SC0120 | UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase | chromosome | CDS | 137811 | 1488 | + | 0.586694 |
murF | SC0121 | D-alanine:D-alanine-adding enzyme | chromosome | CDS | 139295 | 1359 | + | 0.564386 |
murG | SC0125 | UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase | chromosome | CDS | 144289 | 1068 | + | 0.614232 |
murI | SC4020 | glutamate racemase | chromosome | CDS | 4284268 | 852 | + | 0.545775 |
nanA | SC3277 | N-acetylneuraminate lyase (aldolase) | chromosome | CDS | 3462860 | 894 | - | 0.540268 |
nlpB | SC2483 | lipoprotein-34 | chromosome | CDS | 2616882 | 1035 | - | 0.577778 |
nlpC | SC1362 | lipoprotein | chromosome | CDS | 1458126 | 465 | + | 0.486022 |
nlpD | SC2857 | lipoprotein | chromosome | CDS | 3021483 | 1122 | - | 0.518717 |
nmpC | SC1572 | new outer membrane protein; predicted bacterial porin | chromosome | CDS | 1668993 | 1089 | + | 0.504132 |
ompA | SC1022 | putative hydrogenase, membrane component | chromosome | CDS | 1141579 | 1053 | - | 0.54226 |
ompC | SC1547 | putative outer membrane protein | chromosome | CDS | 1644563 | 1119 | + | 0.460232 |
ompC | SC2271 | outer membrane protein 1b (ib;c), porin | chromosome | CDS | 2379727 | 1137 | - | 0.524186 |
ompF | SC0956 | outer membrane protein 1a (ia;b;f), porin | chromosome | CDS | 1075051 | 1098 | - | 0.51275 |
ompN | SC1490 | outer membrane protein N, non-specific porin | chromosome | CDS | 1587835 | 1134 | - | 0.477072 |
ompS | SC1998 | putative porin | chromosome | CDS | 2099330 | 1194 | + | 0.5067 |
ompW | SC1728 | outer membrane protein W; colicin S4 receptor; putative transporter | chromosome | CDS | 1841025 | 639 | - | 0.525822 |
ompX | SC0829 | outer membrane protease, receptor for phage OX2 | chromosome | CDS | 928127 | 516 | + | 0.513566 |
opcC | SC1510 | putative periplasmic component, ABC transport system | chromosome | CDS | 1608486 | 903 | - | 0.522702 |
oprM | SC0393 | outer membrane efflux protein-like protein | chromosome | CDS | 436959 | 1458 | - | 0.595336 |
oxd6E | SC1272 | putative inner membrane protein | chromosome | CDS | 1375614 | 1134 | - | 0.4903 |
pagC | SC1256 | PhoP regulated: reduced macrophage survival | chromosome | CDS | 1363885 | 558 | + | 0.430108 |
pagC | SC2971 | outer membrane protein (associated with virulence) | chromosome | CDS | 3151953 | 537 | - | 0.489758 |
pal | SC0753 | tol protein required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA to cytoplasm | chromosome | CDS | 846305 | 525 | + | 0.537143 |
pbpA | SC1917 | putative penicillin-binding protein | chromosome | CDS | 2027099 | 1872 | + | 0.522436 |
pbpG | SC2184 | D-alanyl-D-alanine endopeptidase; penicillin-binding protein 7 and penicillin-binding protein 8 | chromosome | CDS | 2288040 | 948 | - | 0.53903 |
pdgL | SC1596 | Periplasmic dipeptidase for D-ala-D-ala digestion in peptidoglycan | chromosome | CDS | 1703102 | 771 | - | 0.473411 |
pgtE | SC2396 | Phosphoglycerate transport: outer membrane protein E | chromosome | CDS | 2520465 | 939 | - | 0.463259 |
phoE | SC0321 | outer membrane pore protein e (e,ic,nmpab) | chromosome | CDS | 368942 | 1053 | - | 0.469136 |
pldA | SC3856 | outer membrane phospholipase A | chromosome | CDS | 4095865 | 870 | + | 0.504598 |
pmrF | SC2300 | putative glycosyl transferase | chromosome | CDS | 2419393 | 984 | + | 0.525406 |
pnl | SC4365 | putative aspartate racemase | chromosome | CDS | 4672005 | 735 | + | 0.552381 |
prc | SC1841 | carboxy-terminal protease for penicillin-binding protein 3 | chromosome | CDS | 1957086 | 2049 | - | 0.519278 |
psi | SC3535 | putative phosphosugar isomerase | chromosome | CDS | 3731939 | 975 | - | 0.50359 |
rfaB | SC3642 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6 -D-galactosyltransferase | chromosome | CDS | 3856835 | 1080 | - | 0.393519 |
rfaC | SC3635 | heptosyl transferase I | chromosome | CDS | 3849598 | 954 | + | 0.54717 |
rfaD | SC3633 | ADP-L-glycero-D-mannoheptose-6-epimerase | chromosome | CDS | 3847617 | 933 | + | 0.505895 |
rfaE | SC3147 | putative sugar nucleotide transferase domain of ADP-L-glycero-D-manno-heptose synthase | chromosome | CDS | 3324634 | 1434 | - | 0.576011 |
rfaF | SC3634 | ADP-heptose; LPS heptosyltransferase 1 | chromosome | CDS | 3848552 | 1047 | + | 0.584527 |
rfaG | SC3645 | glucosyltransferase I | chromosome | CDS | 3859039 | 1125 | - | 0.481778 |
rfaI | SC3641 | UDP-D-galactose:(glucosyl)lipopolysaccharide-alp ha-1,3-D-galactosyltransferase | chromosome | CDS | 3855816 | 1014 | - | 0.380671 |
rfaJ | SC3640 | UDP-D-glucose:(galactosyl)lipopolysaccharidegluc osyltransferase | chromosome | CDS | 3854788 | 1011 | - | 0.34817 |
rfaK | SC3637 | putative hexose transferase, lipopolysaccharide core biosynthesis | chromosome | CDS | 3851863 | 1146 | - | 0.411867 |
rfaQ | SC3646 | lipopolysaccharide core biosynthesis; modification of heptose region of core | chromosome | CDS | 3860160 | 1071 | - | 0.475257 |
rffG | SC3827 | dTDP-glucose 4,6-dehydratase | chromosome | CDS | 4066818 | 1068 | + | 0.554307 |
rffH | SC3828 | glucose-1-phosphate thymidylyltransferase | chromosome | CDS | 4067918 | 882 | + | 0.553288 |
rhs | SC0284 | Rhs-family protein | chromosome | CDS | 327039 | 4782 | + | 0.59954 |
rlpA | SC0668 | minor lipoprotein | chromosome | CDS | 742299 | 1146 | - | 0.609948 |
rlpB | SC0677 | minor lipoprotein | chromosome | CDS | 751067 | 591 | - | 0.554992 |
rspA | SC1522 | putative dehydratase, starvation sensing protein | chromosome | CDS | 1620407 | 1215 | + | 0.546502 |
sapA | SC0307 | sapA-like protein | chromosome | CDS | 353897 | 720 | - | 0.426389 |
sipD | SC2815 | cell invasion protein | chromosome | CDS | 2980283 | 1032 | - | 0.47093 |
slp | SC1813 | putative outer membrane protein | chromosome | CDS | 1932284 | 582 | - | 0.560137 |
slt | SC4427 | lytic murein transglycosylase, soluble | chromosome | CDS | 4737267 | 1974 | + | 0.569909 |
slyB | SC1463 | putative outer membrane lipoprotein | chromosome | CDS | 1558056 | 465 | - | 0.544086 |
sopE2 | SC1852 | TypeIII-secreted protein effector: invasion-associated protein | chromosome | CDS | 1967962 | 723 | - | 0.423237 |
spr | SC2230 | putative lipoprotein, suppresses thermosensitivity of prc mutants at low osmolality | chromosome | CDS | 2337509 | 573 | + | 0.495637 |
tolA | SC0751 | tol protein, membrane spanning protein | chromosome | CDS | 843694 | 1161 | + | 0.582257 |
tolC | SC3130 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes, role in organic solvent tolerance | chromosome | CDS | 3309329 | 1476 | + | 0.523713 |
tonB | SC1733 | energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins | chromosome | CDS | 1844391 | 846 | - | 0.542553 |
tsx | SC0454 | nucleoside channel; receptor of phage T6 and colicin K | chromosome | CDS | 511948 | 969 | - | 0.496388 |
udg | SC2090 | UDP-glucose/GDP-mannose dehydrogenase | chromosome | CDS | 2179261 | 1167 | - | 0.436161 |
vacJ | SC2394 | lipoprotein precursor | chromosome | CDS | 2518173 | 756 | - | 0.541005 |
vtaK | SC1232 | Gifsy-1 prophage VtaK | chromosome | CDS | 1341312 | 555 | + | 0.572973 |
vtaK | SC0999 | Gifsy-2 prophage probable tail assembly protein | chromosome | CDS | 1112071 | 738 | + | 0.54607 |
wcaA | SC2116 | putative glycosyl transferase in colanic acid biosynthesis | chromosome | CDS | 2210445 | 843 | - | 0.508897 |
wcaC | SC2114 | putative glycosyl transferase in colanic acid biosynthesis | chromosome | CDS | 2208740 | 1218 | - | 0.558292 |
wcaE | SC2112 | putative transferase in colanic acid biosynthesis | chromosome | CDS | 2206792 | 747 | - | 0.488621 |
wcaG | SC2109 | GDP fucose synthetase | chromosome | CDS | 2204109 | 966 | - | 0.600414 |
wcaI | SC2107 | putative glycosyl transferase in colanic acid biosynthesis | chromosome | CDS | 2202413 | 1224 | - | 0.578431 |
wcaJ | SC2104 | putative UDP-glucose lipid carrier transferase/glucose-1-phosphate transferase in colanic acid gene cluster | chromosome | CDS | 2198045 | 1395 | - | 0.532616 |
wcaL | SC2101 | putative glycosyl transferase in colanic acid gene cluster | chromosome | CDS | 2193946 | 1221 | - | 0.562654 |
wecA | SC3823 | Undecaprenyl-phosphatealpha-N-acetylglucosaminyl | chromosome | CDS | 4062212 | 1104 | + | 0.491848 |
wecB | SC3825 | UDP-N-acetyl glucosamine-2-epimerase | chromosome | CDS | 4064552 | 1008 | + | 0.522817 |
wecC | SC3826 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase | chromosome | CDS | 4065511 | 1308 | + | 0.567278 |
wecE | SC3830 | TDP-4-oxo-6-deoxy-D-glucose transaminase | chromosome | CDS | 4069459 | 1131 | + | 0.536693 |
wecG | SC3834 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase | chromosome | CDS | 4074269 | 741 | + | 0.557355 |
wza | SC2119 | putative polysaccharide export protein, outer membrane | chromosome | CDS | 2213985 | 1140 | - | 0.538597 |
wzc | SC2117 | putative tyrosine-protein kinase in colanic acid export | chromosome | CDS | 2211374 | 2160 | - | 0.5375 |
wzzB | SC2089 | regulator of length of O-antigen component of lipopolysaccharide chains | chromosome | CDS | 2178135 | 1038 | - | 0.50289 |
wzzE | SC3824 | modulator of enterobacterial common antigen (ECA) polysaccharide chain length | chromosome | CDS | 4063327 | 1047 | + | 0.515759 |
yabC | SC0117 | putative S-adenosyl methionine adenyltransferase | chromosome | CDS | 134742 | 939 | + | 0.563365 |
yaeL | SC0223 | putative membrane-associated Zn-dependent protease | chromosome | CDS | 256986 | 1353 | + | 0.530673 |
yaeT | SC0224 | putative outer membrane antigen | chromosome | CDS | 258370 | 2418 | + | 0.524814 |
yagE | SC3462 | putative dihydrodipicolinate synthetase | chromosome | CDS | 3650334 | 906 | + | 0.475717 |
yajG | SC0487 | putative lipoprotein | chromosome | CDS | 544475 | 633 | - | 0.508689 |
ybdG | SC0606 | putative transport | chromosome | CDS | 675787 | 1248 | - | 0.49359 |
ybhG | SC0815 | membrane permeases, predicted cation efflux pump | chromosome | CDS | 912283 | 996 | - | 0.574297 |
ybiO | SC0822 | paral putative transport protein | chromosome | CDS | 920994 | 2223 | - | 0.545209 |
ybjS | SC0887 | putative nucleoside-diphosphate-sugar epimerase | chromosome | CDS | 991536 | 1014 | - | 0.547337 |
ybjT | SC0888 | putative nucleoside-diphosphate-sugar epimerase | chromosome | CDS | 992645 | 1434 | - | 0.578801 |
ybjY | SC0896 | paral putative membrane protein | chromosome | CDS | 1003633 | 1119 | + | 0.529044 |
ycfN | SC1158 | putative cytoplasmic protein | chromosome | CDS | 1273137 | 825 | + | 0.567273 |
ycfU | SC1167 | ABC transporter, integral membrane protein | chromosome | CDS | 1283931 | 1311 | + | 0.544622 |
ycfW | SC1169 | ABC transporter, integral membrane protein | chromosome | CDS | 1285935 | 1245 | + | 0.535743 |
ycgR | SC1791 | putative inner membrane protein | chromosome | CDS | 1912440 | 735 | + | 0.527891 |
ycjG | SC1674 | putative chloromuconate cycloisomerase (muconate cycloisomerase) | chromosome | CDS | 1787637 | 966 | - | 0.575569 |
ydhO | SC1451 | putative cell wall-associated hydrolase | chromosome | CDS | 1547809 | 855 | - | 0.512281 |
ydiY | SC1348 | putative salt-induced outer membrane protein | chromosome | CDS | 1444975 | 759 | + | 0.503294 |
yebA | SC1898 | putative Peptidase | chromosome | CDS | 2007655 | 1320 | - | 0.546212 |
yeeZ | SC2080 | putative dehydratase | chromosome | CDS | 2169744 | 825 | - | 0.569697 |
yegM | SC2129 | putative HlyD family secretion protein | chromosome | CDS | 2226805 | 1194 | + | 0.586265 |
yehZ | SC2181 | putative ABC superfamily (bind_prot) transport protein (possibly glycine betaine choline transport for osmoprotection) | chromosome | CDS | 2282590 | 918 | - | 0.555556 |
yfaW | SC2294 | paral putative galactonate dehydratase | chromosome | CDS | 2412495 | 1206 | - | 0.538143 |
yfbE | SC2299 | putative DegT/DnrJ/EryC1/StrS family | chromosome | CDS | 2418251 | 1140 | + | 0.563158 |
yfbI | SC2302 | putative melittin resistance protein, PqaB, affects polymycin B resistance and lipopolysaccharide synthesis | chromosome | CDS | 2423247 | 1647 | + | 0.542805 |
yfdH | SC0596 | putative glycosyltransferase | chromosome | CDS | 666637 | 927 | - | 0.458468 |
yfdH | SC0593 | putative glycosyltransferase | chromosome | CDS | 661356 | 927 | + | 0.457389 |
yfeL | SC2437 | putative membrane carboxypeptidase (penicillin-binding protein) | chromosome | CDS | 2566732 | 540 | + | 0.496296 |
yfeN | SC2421 | putative outer membrane protein | chromosome | CDS | 2551548 | 762 | + | 0.456693 |
yfhD | SC2562 | putative periplasmic amino acid binding protein | chromosome | CDS | 2732859 | 1545 | + | 0.521683 |
ygeA | SC2954 | putative aspartate racemase | chromosome | CDS | 3134674 | 681 | - | 0.535977 |
ygeR | SC2978 | putative metalloendopeptidase | chromosome | CDS | 3155747 | 759 | - | 0.540184 |
yggB | SC3009 | putative membrane protein, involved in stability of MscS mechanosensitive channel | chromosome | CDS | 3186596 | 861 | - | 0.508711 |
yhiI | SC3516 | paral putative membrane protein | chromosome | CDS | 3709883 | 933 | - | 0.613076 |
yhjG | SC3544 | putative inner membrane protein | chromosome | CDS | 3744315 | 2061 | - | 0.545366 |
yiaD | SC3577 | putative outer membrane lipoprotein | chromosome | CDS | 3783587 | 663 | + | 0.589744 |
yibD | SC3630 | putative glycosyltransferase | chromosome | CDS | 3843856 | 963 | - | 0.494289 |
yibJ | SC2145 | orf, hypothetical protein | chromosome | CDS | 2248348 | 738 | - | 0.443089 |
yibR | SC3643 | putative inner membrane protein | chromosome | CDS | 3857984 | 234 | - | 0.316239 |
yin | SC3621 | putative mandelate racemase / muconate lactonizing enzyme family | chromosome | CDS | 3833958 | 1197 | + | 0.543024 |
ynaI | SC1659 | putative integral membrane protein | chromosome | CDS | 1769938 | 1032 | + | 0.448643 |
yncA | SC1587 | putative acyltransferase | chromosome | CDS | 1691487 | 516 | + | 0.552326 |
yohG | SC2188 | putative Outer membrane efflux protein | chromosome | CDS | 2291343 | 1437 | - | 0.576896 |
yohK | SC2199 | putative transmembrane protein | chromosome | CDS | 2300831 | 696 | + | 0.560345 |
yraR | SC3209 | putative nucleoside-diphosphate-sugar epimerase | chromosome | CDS | 3393013 | 669 | - | 0.578475 |
ytfB | SC4270 | putative cell envelope opacity-associated protein A | chromosome | CDS | 4567769 | 636 | - | 0.572327 |
ytfM | SC4284 | putative outer membrane protein | chromosome | CDS | 4583572 | 1734 | + | 0.528258 |
ywgG | SC4151 | putative inner membrane protein | chromosome | CDS | 4445397 | 690 | + | 0.585507 |