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2024-05-01 22:02:47

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Rickettsia typhi str. Wilmington, Wilmington

Number of genes found: 78

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rickettsia typhi str. Wilmington, Wilmington
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RT0151 probable membrane associated zinc metalloproteasechromosome CDS192627 1074 - 0.315642
NA RT0683 conserved hypothetical proteinchromosome CDS866527 930 + 0.268817
NA RT0775 rickettsial conserved hypothetical proteinchromosome CDS989184 714 + 0.280112
NA RT0694 conserved hypothetical proteinchromosome CDS880785 1248 + 0.292468
NA RT0463 possible lipopolysaccharide 1,2-glucosyltransferase WaaJchromosome CDS593138 1554 + 0.260618
NA RT0329 glycosyltransferasechromosome CDS417234 957 + 0.267503
NA RT0388 soluble lytic transglycosylase domain containing proteinchromosome CDS488245 1956 + 0.296012
NA RT0400 glycosyltransferasechromosome CDS509116 1017 - 0.279253
NA RT0433 glycosyltransferasechromosome CDS546736 843 + 0.279953
NA RT0347 conserved hypothetical proteinchromosome CDS438817 1218 - 0.270936
NA RT0815 possible outer surface proteinchromosome CDS1041580 741 - 0.300945
NA RT0083 conserved hypothetical proteinchromosome CDS108196 1167 - 0.260497
NA RT0821 rickettsial 17 kDa surface antigen precursorchromosome CDS1046013 480 + 0.429167
NA RT0064 rickettsial conserved hypothetical proteinchromosome CDS82266 1323 + 0.331822
NA RT0330 WaaG-like sugar transferasechromosome CDS418166 1017 + 0.26057
NA RT0393 conserved hypothetical proteinchromosome CDS499359 1365 + 0.280586
NA RT0057 OmpW-like outer membrane proteinchromosome CDS76015 723 + 0.316736
NA RT0331 probable efflux transporterchromosome CDS419194 999 - 0.285285
NA RT0853 conserved hypothetical proteinchromosome CDS1089523 642 + 0.241433
NA RT0813 undecaprenyl-phosphatealpha-N-acetylglucosaminyltransferasechromosome CDS1039989 981 + 0.289501
NA RT0323 sugar epimerasechromosome CDS410487 1026 + 0.330409
NA RT0334 WaaG-like sugar transferasechromosome CDS421870 1170 + 0.311111
NA RT0444 conserved hypothetical proteinchromosome CDS568744 789 + 0.290241
NA RT0255 conserved hypothetical proteinchromosome CDS324421 507 + 0.313609
NA RT0327 possible glycosyltransferasechromosome CDS415002 1212 + 0.311881
NA RT0326 probable glycosyltransferasechromosome CDS413782 1224 + 0.308824
NA RT0109 conserved hypothetical proteinchromosome CDS143215 1065 - 0.286385
NA RT0816 possible outer surface proteinchromosome CDS1042545 678 - 0.339233
NA RT0209 glucosyltransferasechromosome CDS267959 879 + 0.295791
alr RT0042 alanine racemasechromosome CDS52970 1209 - 0.321754
aprE RT0304 alkaline proteinase secretion proteinchromosome CDS385761 1536 - 0.313802
asmA RT0336 outer membrane assembly protein AsmAchromosome CDS426547 2496 - 0.259615
ctp RT0220 tail specific periplasmic protease precursorchromosome CDS284315 1329 + 0.317532
dacF RT0377 serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein DacF precursor)chromosome CDS479212 921 + 0.310532
dapA RT0415 dihydrodipicolinate synthasechromosome CDS527113 885 + 0.306215
ddlB RT0241 D-alanine--D-alanine ligasechromosome CDS304379 966 + 0.311594
ftsI1 RT0553 cell division protein FtsI/ penicillin-binding proteinchromosome CDS715866 1785 - 0.317647
ftsI2 RT0555 cell division protein FtsI/ penicillin-binding proteinchromosome CDS718673 1686 - 0.317912
ftsQ RT0242 cell division protein FtsQchromosome CDS305341 801 + 0.263421
gidB RT0075 glucose inhibited division protein Bchromosome CDS96930 576 - 0.234375
glmU RT0441 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS566819 747 - 0.281125
kdsA RT0070 3-deoxy-8-phosphooctulonate synthasechromosome CDS92301 825 - 0.322424
kdsB RT0368 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS468475 726 - 0.301653
lepA RT0266 GTP-binding protein LepAchromosome CDS334763 1803 + 0.351636
lgt RT0084 prolipoprotein diacylglyceryl transferasechromosome CDS109598 780 + 0.280769
lnt RT0354 apolipoprotein N-acyltransferasechromosome CDS445435 1491 + 0.293092
lpxA RT0006 acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferasechromosome CDS6007 795 - 0.332075
lpxB RT0311 lipid-A-disaccharide synthasechromosome CDS393926 1143 + 0.281715
lpxC RT0246 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylasechromosome CDS309632 870 - 0.317241
lpxD RT0008 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS7429 1041 - 0.32853
lpxK RT0705 tetraacyldisaccharide 4'-kinasechromosome CDS899208 966 - 0.280538
lpxL RT0704 lipid A biosynthesis lauroyl acyltransferasechromosome CDS898361 873 - 0.312715
lspA RT0394 lipoprotein signal peptidasechromosome CDS500855 591 + 0.277496
mraW RT0557 S-adenosyl-methyltransferase MraWchromosome CDS721061 921 - 0.32139
mraY RT0583 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS754171 1086 - 0.314917
mrcA RT0794 penicillin-binding protein 1Achromosome CDS1014828 2358 - 0.339271
mreC RT0754 rod shape-determining proteinchromosome CDS957744 840 - 0.280952
murA RT0568 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS734733 1260 - 0.336508
murB RT0240 UDP-N-acetylmuramate dehydrogenasechromosome CDS303380 888 + 0.309685
murC RT0239 UDP-N-acetylmuramate--L-alanine ligasechromosome CDS301873 1497 + 0.311957
murD RT0396 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS501879 1374 + 0.281659
murE RT0585 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligasechromosome CDS756841 1497 - 0.298597
murF RT0584 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligasechromosome CDS755424 1347 - 0.282851
murG RT0398 undecaprenyldiphospho-muramoylpentapeptidebeta-N-acetylglucosaminyltransferasechromosome CDS504423 1158 + 0.292746
nlpD RT0291 outer membrane antigenic lipoprotein B precursorchromosome CDS368701 633 + 0.296998
omp1 RT0150 outer membrane protein Omp1chromosome CDS190091 2307 - 0.299523
ostA RT0668 probable organic solvent tolerance protein OstAchromosome CDS844520 2136 - 0.295412
pal RT0758 peptidoglycan-associated lipoprotein precursorchromosome CDS961362 468 - 0.348291
pbpC RT0185 membrane carboxypeptidase/penicillin-binding protein PbpCchromosome CDS234789 2331 - 0.290004
rffE RT0324 UDP-N-acetylglucosamine 2-epimerasechromosome CDS411505 1131 + 0.322723
rlpA RT0378 rare lipoprotein A precursorchromosome CDS480248 963 - 0.273105
rmlD RT0322 probable dTDP-4-dehydrorhamnose reductasechromosome CDS409600 855 + 0.320468
tolC RT0216 outer membrane protein TolC precursorchromosome CDS278361 1365 + 0.342125
udg RT0766 UDP-glucose 6-dehydrogenasechromosome CDS974397 1305 - 0.302682
vacJ RT0044 lipoprotein precursorchromosome CDS55575 756 - 0.316138
waaA RT0048 3-deoxy-D-manno-octulosonic-acid transferasechromosome CDS59542 1389 + 0.287977
wzm RT0004 O-antigen export system permease proteinchromosome CDS2067 777 + 0.265122
wzt RT0003 O-antigen export system ATP-binding proteinchromosome CDS1312 759 + 0.274045