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2024-05-21 07:16:12

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Haemophilus ducreyi 35000HP, 35000HP

Number of genes found: 108

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Haemophilus ducreyi 35000HP, 35000HP
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA HD1655 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1376947 1809 - 0.353787
NA HD0445 possible ADP-heptose--lipooligosaccharide heptosyltransferase ISubName: Full=Possible ADP-heptose--lipooligosaccharide heptosyltransferase I; chromosome CDS350849 1047 - 0.374403
NA HD1190 hypothetical outer membrane proteinSubName: Full=Hypothetical outer membrane protein; chromosome CDS968760 780 - 0.330769
NA HD1829 probable outer membrane proteinSubName: Full=Probable outer membrane protein; chromosome CDS1531604 1407 - 0.355366
NA HD0798 putative periplasmic binding transport protein, transglycosylase Slt family homologRecName: Full=Membrane-bound lytic murein transglycosylase F; EC=4.2.2.n1; AltName: Full=Murein lyase F; Flags: Precursor; chromosome CDS632928 1419 + 0.381254
NA HD1792 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome CDS1501153 591 + 0.333333
NA HD1017 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS807600 432 + 0.328704
NA HD0641 possible D,D-carboxypeptidase-related proteinSubName: Full=Possible D,D-carboxypeptidase-related protein; chromosome CDS504028 681 - 0.403818
NA HD1325 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1078607 1962 + 0.425076
NA HD2017 possible rare lipoprotein ASubName: Full=Possible rare lipoprotein A; chromosome CDS1679238 555 - 0.358559
NA HD1549 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1274119 609 + 0.449918
NA HD1400 putative soluble lytic murein transglycosylaseSubName: Full=Putative soluble lytic murein transglycosylase; chromosome CDS1146724 2133 + 0.360994
NA HD0647 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS510876 969 + 0.347781
NA HD0038 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS35412 600 + 0.421667
NA HD1090 putative glycosyl transferaseSubName: Full=Putative glycosyl transferase; chromosome CDS867534 810 - 0.25679
NA HD1481 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome CDS1217485 516 - 0.358527
NA HD1021 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS812807 768 - 0.377604
NA HD1289 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1052194 693 + 0.380952
NA HD0756 lipoproteinSubName: Full=Lipoprotein; chromosome CDS594874 579 - 0.39551
NA HD0375 possible glycosyltransferaseSubName: Full=Possible glycosyltransferase; chromosome CDS294325 801 + 0.345818
NA HD1513 putative RND efflux membrane fusion proteinSubName: Full=Putative RND efflux membrane fusion protein; chromosome CDS1258043 1317 - 0.406986
D15 HD1191 outer membrane protein D-15RecName: Full=Outer membrane protein assembly factor BamA; Flags: Precursor; chromosome CDS969641 2382 - 0.361461
LgtF HD1201 UDP-glucose--Lipooligosaccharide beta 1-4 glucosyltransferaseSubName: Full=UDP-glucose--Lipooligosaccharide beta 1-4 glucosyltransferase; chromosome CDS977139 759 + 0.372859
WaaQ HD1202 ADP-heptose--lipooligosaccharide heptosyltransferase IIISubName: Full=ADP-heptose--lipooligosaccharide heptosyltransferase III; chromosome CDS977937 1035 - 0.392271
alr HD0624 alanine racemaseRecName: Full=Alanine racemase; EC=5.1.1.1; chromosome CDS485783 1125 - 0.418667
amiB HD0450 N-acetylmuramoyl-L-alanine amidaseSubName: Full=N-acetylmuramoyl-L-alanine amidase; chromosome CDS355684 1032 - 0.354651
dacA HD2016 penicillin-binding protein 5SubName: Full=Penicillin-binding protein 5; chromosome CDS1677958 1182 - 0.367174
dapA HD1107 dihydrodipicolinate synthase (DHDPS)RecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; chromosome CDS882025 894 + 0.395973
ddlB HD0821 D-alanine-D-alanine ligase BRecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; chromosome CDS652519 912 - 0.382675
dgkA HD1253 diacylglycerol kinaseSubName: Full=Diacylglycerol kinase; chromosome CDS1017558 360 - 0.358333
ecfE HD1192 Protease EcfESubName: Full=Protease EcfE; chromosome CDS972071 1314 - 0.348554
ftsI HD0241 penicillin-binding protein 3SubName: Full=Penicillin-binding protein 3; chromosome CDS179745 2046 + 0.395894
ftsQ HD0820 cell division protein FtsQRecName: Full=Cell division protein FtsQ; chromosome CDS651728 792 - 0.35101
galE HD0829 UDP-glucose-4-epimeraseSubName: Full=UDP-glucose-4-epimerase; chromosome CDS658377 1017 - 0.408063
galU HD1431 UTP-glucose-1-phosphate uridylyltransferaseRecName: Full=UTP--glucose-1-phosphate uridylyltransferase; EC=2.7.7.9; AltName: Full=Alpha-D-glucosyl-1-phosphate uridylyltransferase; AltName: Full=UDP-glucose pyrophosphorylase; Short=UDPGP; AltName: Full=Uridine diphosphoglucose pyrophosphorylase; chromosome CDS1172605 888 + 0.390766
gidB HD0002 glucose inhibited division protein BRecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.170; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; chromosome CDS2293 612 + 0.387255
glmS HD1894 glucosamine--fructose-6-phosphateaminotransferas eRecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; chromosome CDS1591723 1833 - 0.397709
glmU HD1511 Bifunctional GlmU proteinRecName: Full=Bifunctional protein GlmU; Includes: RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.7.7.23; AltName: Full=N-acetylglucosamine-1-phosphate uridyltransferase; Includes: RecName: Full=Glucosamine-1-phosphate N-acetyltransferase; EC=2.3.1.157; chromosome CDS1253431 1371 - 0.399708
gmhD HD1890 ADP-L-glycero-D-manno-heptose-6-epimeraseRecName: Full=ADP-L-glycero-D-manno-heptose-6-epimerase; EC=5.1.3.20; AltName: Full=ADP-L-glycero-beta-D-manno-heptose-6-epimerase; Short=ADP-glyceromanno-heptose 6-epimerase; Short=ADP-hep 6-epimerase; Short=AGME; chromosome CDS1588825 942 + 0.369427
imp HD1704 organic solvent tolerance proteinRecName: Full=LPS-assembly protein LptD; Flags: Precursor; chromosome CDS1418783 2340 - 0.363248
ispH HD0064 hydroxymethylbutenyl pyrophosphate reductaseRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS54296 945 + 0.421164
kdsA HD0857 2-dehydro-3-deoxyphosphooctonate aldolaseRecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; EC=2.5.1.55; AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthase; AltName: Full=KDO-8-phosphate synthase; Short=KDO 8-P synthase; Short=KDOPS; AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase; chromosome CDS684749 861 + 0.391405
kdsB HD0334 3-deoxy-manno-octulosonate cytidylyltransferaseRecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase; EC=2.7.7.38; AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid synthase; Short=CKS; Short=CMP-KDO synthase; chromosome CDS263881 762 + 0.419948
lbgA HD1721 lipooligosaccharide galactosyltransferase ISubName: Full=Lipooligosaccharide galactosyltransferase I; chromosome CDS1434417 675 - 0.271111
lbgB HD1720 lipooligosaccharideD-glycero-D-manno-heptosyltransferaseSubName: Full=Lipooligosaccharide D-glycero-D-manno-heptosyltransferase; chromosome CDS1433385 1032 - 0.257752
lepA HD1608 GTP-binding protein LepARecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; chromosome CDS1328888 1800 - 0.364444
lgt HD0174 prolipoprotein diacylglyceryl transferaseRecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; chromosome CDS116565 798 + 0.421053
lgtA HD0466 lipooligosaccharide N-acetylglucosamine glycosyltransferaseSubName: Full=Lipooligosaccharide N-acetylglucosamine glycosyltransferase; chromosome CDS367222 993 + 0.321249
lgtB HD0472 lipooligosaccharide galactosyltransferase IISubName: Full=Lipooligosaccharide galactosyltransferase II; chromosome CDS372034 843 + 0.247924
lnt HD1144 apolipoprotein N-acyltransferaseRecName: Full=Apolipoprotein N-acyltransferase; Short=ALP N-acyltransferase; EC=2.3.1.-; chromosome CDS911305 1518 - 0.383399
lolA HD1237 outer membrane lipoprotein carrier proteinRecName: Full=Outer-membrane lipoprotein carrier protein; Flags: Precursor; chromosome CDS1004481 633 + 0.371248
lolB HD1629 outer membrane lipoprotein LolBRecName: Full=Outer-membrane lipoprotein LolB; Flags: Precursor; chromosome CDS1349720 630 - 0.350794
lolC HD0858 lipoprotein releasing system transmembrane proteinSubName: Full=Lipoprotein releasing system transmembrane protein; chromosome CDS685615 1173 + 0.381927
lolE HD0861 lipoprotein releasing system transmembrane proteinSubName: Full=Lipoprotein releasing system transmembrane protein; chromosome CDS687552 1251 + 0.3749
lpp HD0266 15kd outer membrane lipoproteinSubName: Full=15 kDa outer membrane lipoprotein; chromosome CDS200788 471 - 0.41189
lpxA HD1187 UDP-N-acetylglucosamine O-acyltransferaseRecName: Full=Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Short=UDP-N-acetylglucosamine acyltransferase; EC=2.3.1.129; chromosome CDS966368 795 - 0.376101
lpxB HD0846 lipid-A-disaccharide synthaseRecName: Full=Lipid-A-disaccharide synthase; EC=2.4.1.182; chromosome CDS672926 1173 - 0.401535
lpxC HD0816 UDP-3-O-acyl-GlcNAc deacetylaseRecName: Full=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; EC=3.5.1.-; AltName: Full=UDP-3-O-acyl-GlcNAc deacetylase; chromosome CDS648238 921 - 0.34962
lpxD HD1189 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferaseRecName: Full=UDP-3-O-acylglucosamine N-acyltransferase; EC=2.3.1.-; chromosome CDS967735 1026 - 0.404483
lpxK HD0217 tetraacyldisaccharide 4' kinaseRecName: Full=Tetraacyldisaccharide 4-kinase; EC=2.7.1.130; AltName: Full=Lipid A 4-kinase; chromosome CDS157810 987 - 0.410334
lpxL HD1106 lipid A acyltransferaseSubName: Full=Lipid A acyltransferase; chromosome CDS880973 939 + 0.365282
lpxM HD0404 lipid A acyltransferaseSubName: Full=Lipid A acyltransferase; chromosome CDS320252 957 + 0.380355
lsgD HD0883 possible lipooligosaccharide N-acetylglucosamine glycosyltransferaseSubName: Full=Possible lipooligosaccharide N-acetylglucosamine glycosyltransferase; chromosome CDS706181 795 + 0.377358
lsgE HD0885 putative lipooligosaccharide galactosyltransferaseSubName: Full=Putative lipooligosaccharide galactosyltransferase; chromosome CDS708150 882 + 0.368481
lsgF HD0886 putative lipooligosaccharide galactosyltransferaseSubName: Full=Putative lipooligosaccharide galactosyltransferase; chromosome CDS709031 801 + 0.39201
lspA HD0063 lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS53810 486 + 0.349794
macA HD1018 probable macrolide-specific efflux proteinSubName: Full=Probable macrolide-specific efflux protein; chromosome CDS808192 1173 + 0.355499
mepA HD1275 penicillin-insensitive murein endopeptidase ASubName: Full=Penicillin-insensitive murein endopeptidase A; chromosome CDS1037327 831 + 0.436823
mltA HD1636 lytic murein transglycosylase ASubName: Full=Lytic murein transglycosylase A; chromosome CDS1355481 1107 - 0.392954
mltC HD2002 membrane-bound lytic murein transglycosylase CRecName: Full=Membrane-bound lytic murein transglycosylase C; EC=4.2.2.n1; AltName: Full=Murein lyase C; Flags: Precursor; chromosome CDS1666187 1104 - 0.370471
momp HD0045 major outer membrane proteinSubName: Full=Major outer membrane protein; chromosome CDS40269 1212 + 0.370462
mpl HD0703 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl- medo-diaminopimelate ligaseSubName: Full=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-medo-diaminopimelate ligase; chromosome CDS556767 1380 + 0.413043
mraW HD0239 S-adenosyl-methyltransferase MraWRecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; chromosome CDS178471 942 + 0.401274
mraY HD0244 phospho-N-acetylmuramoyl-pentapeptide-transferaseERecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; chromosome CDS184765 1083 + 0.381348
mrcA HD0426 penicillin-binding protein 1ASubName: Full=Penicillin-binding protein 1A; chromosome CDS336370 2619 - 0.385643
mrdA HD2020 penicillin binding protein 2SubName: Full=Penicillin binding protein 2; chromosome CDS1681042 1962 - 0.390418
mreC HD1293 rod shape-determining protein MreCRecName: Full=Cell shape-determining protein MreC; AltName: Full=Cell shape protein MreC; chromosome CDS1056044 1062 + 0.393597
mreD HD1294 rod shape-determining protein MreDSubName: Full=Rod shape-determining protein MreD; chromosome CDS1057105 489 + 0.361963
mscL HD2027 large-conductance mechanosensitive channelRecName: Full=Large-conductance mechanosensitive channel; chromosome CDS1689869 402 - 0.385572
murA HD0253 UDP-N-Acetyllglucosamine-1-carboxyvinyltransfera seRecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase; Short=EPT; chromosome CDS191658 1281 - 0.434036
murB HD0081 UDP-N-acetylenolpyruvoylglucosamine reductaseRecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; chromosome CDS67395 1035 + 0.38744
murC HD0823 UDP-N-acetylmuramate--alanine ligaseRecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; chromosome CDS653450 1428 - 0.404062
murD HD0245 UDP-N-acetylmuramoylalanine--D-glutamateligaseRecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; chromosome CDS185927 1308 + 0.409021
murE HD0242 UDP-N-acetylmuramyl-tripeptide synthetaseRecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13; AltName: Full=Meso-A2pm-adding enzyme; AltName: Full=Meso-diaminopimelate-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; chromosome CDS181813 1506 + 0.401062
murF HD0243 UDP-MurNAc-pentapeptide synthetaseRecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; chromosome CDS183362 1404 + 0.401709
murG HD0824 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferaseRecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; chromosome CDS654912 1068 - 0.412921
murI HD1906 glutamate racemaseRecName: Full=Glutamate racemase; EC=5.1.1.3; chromosome CDS1606459 798 - 0.384712
nanA HD1850 N-acetylneuraminate lyase, truncated chromosome CDS1554010 810 - 0.371605
neuA HD0685 cytidine 5'monophosphate N-acetylneuraminic acid synthetaseSubName: Full=Cytidine 5monophosphate N-acetylneuraminic acid synthetase; chromosome CDS540594 690 + 0.378261
nlpD HD0755 lipoproteinSubName: Full=Lipoprotein; chromosome CDS593671 1119 - 0.411081
ompA2 HD0046 major outer membrane protein homolog, OmpA2SubName: Full=Major outer membrane protein-like protein, OmpA2; chromosome CDS41761 1224 + 0.353758
ompP2A HD1433 outer membrane protein P2 homologSubName: Full=Outer membrane protein P2-like protein; chromosome CDS1174546 1275 + 0.335686
ompP2B HD1435 outer membrane protein P2 homologSubName: Full=Outer membrane protein P2-like protein; chromosome CDS1176194 1194 + 0.330821
pal HD1772 18K peptidoglycan-associated outer membrane lipoproteinSubName: Full=18K peptidoglycan-associated outer membrane lipoprotein; chromosome CDS1485449 474 - 0.396624
prc HD1010 tail-specific proteaseSubName: Full=Tail-specific protease; chromosome CDS802103 2067 + 0.355588
rlpB HD1131 possible rare lipoprotein BRecName: Full=LPS-assembly lipoprotein LptE; Flags: Precursor; chromosome CDS898130 498 - 0.371486
rmlA HD0688 glucose-1-phosphate thymidyltransferaseRecName: Full=Glucose-1-phosphate thymidylyltransferase; EC=2.7.7.24; chromosome CDS543373 888 + 0.402027
rmlB HD0687 dTDP-D-glucose 4,6-dehydrataseRecName: Full=dTDP-glucose 4,6-dehydratase; EC=4.2.1.46; chromosome CDS542311 1041 + 0.393852
tonB HD0327 TobB energy transducing proteinRecName: Full=Protein TonB; chromosome CDS259687 840 - 0.413095
vacJ HD0677 VacJ lipoproteinSubName: Full=VacJ lipoprotein; chromosome CDS534438 744 + 0.385753
waaA HD0454 3-deoxy-D-manno-octulosonic-acid transferaseSubName: Full=3-deoxy-D-manno-octulosonic-acid transferase; chromosome CDS358304 1284 - 0.39486
waaE HD1182 ADP-heptose synthaseRecName: Full=Bifunctional protein HldE; Includes: RecName: Full=D-beta-D-heptose 7-phosphate kinase; EC=2.7.1.167; AltName: Full=D-beta-D-heptose 7-phosphotransferase; AltName: Full=D-glycero-beta-D-manno-heptose-7-phosphate kinase; Includes: RecName: Full=D-beta-D-heptose 1-phosphate adenylyltransferase; EC=2.7.7.70; AltName: Full=D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase; chromosome CDS959473 1431 - 0.409504
waaF HD0653 ADP-heptose--lipooligosaccharide heptosyltransferase IISubName: Full=ADP-heptose--lipooligosaccharide heptosyltransferase II; chromosome CDS516830 906 + 0.409492
wecA HD1844 undecaprenyl-phosphatealpha-N-acetylglucosaminyltransferaseSubName: Full=Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; chromosome CDS1550592 1158 - 0.385147
wecB HD1843 UDP-N-acetylglucosamine 2-epimeraseRecName: Full=UDP-N-acetylglucosamine 2-epimerase; EC=5.1.3.14; chromosome CDS1549432 1080 - 0.403704
wecC HD1842 UDP-N-acetyl-D-mannosamininuronic acid dehydrogenaseSubName: Full=UDP-N-acetyl-D-mannosamininuronic acid dehydrogenase; chromosome CDS1548092 1278 - 0.422535
wecE HD1840 TDP-4-keto-6-deoxy-D-glucose transaminaseSubName: Full=TDP-4-keto-6-deoxy-D-glucose transaminase; chromosome CDS1546298 1131 - 0.396994
wecG HD1833 putative UDP-N-acetyl-D-mannosaminuronic acid transferaseSubName: Full=Putative UDP-N-acetyl-D-mannosaminuronic acid transferase; chromosome CDS1541896 723 - 0.348548