Gene list
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COG category: Cell wall/membrane biogenesis
Organism: Prochlorococcus marinus subsp. marinus str. CCMP1375, CCMP1375; SS120
Number of genes found: 102
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Prochlorococcus marinus subsp. marinus str. CCMP1375, CCMP1375; SS120 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Pro1571 | Predicted protein family PM-9 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1431094 | 378 | + | 0.378307 |
NA | Pro1419 | Probable import-associated channel, similar to chloroplast protein IAP75 | SubName: Full=Probable import-associated channel, similar to chloroplast protein IAP75; | chromosome | CDS | 1317250 | 2493 | - | 0.361813 |
NA | Pro0196 | Predicted S-adenosylmethionine-dependent methyltransferase | RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; | chromosome | CDS | 192903 | 918 | - | 0.367102 |
NA | Pro0679 | Nucleotide-diphosphate-sugar epimerase, membrane associated | SubName: Full=Nucleotide-diphosphate-sugar epimerase, membrane associated; | chromosome | CDS | 624259 | 1896 | - | 0.33808 |
NA | Pro0286 | Repeats containing protein | SubName: Full=Repeats containing protein; | chromosome | CDS | 275871 | 2058 | + | 0.302721 |
NA | Pro0681 | Nucleoside-diphosphate-sugar epimerase | SubName: Full=Nucleoside-diphosphate-sugar epimerase; | chromosome | CDS | 627245 | 903 | - | 0.330011 |
NA | Pro0879 | NAD dependent epimerase/dehydratase | SubName: Full=NAD dependent epimerase/dehydratase; | chromosome | CDS | 799764 | 678 | - | 0.342183 |
NA | Pro1819 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 1677223 | 1314 | - | 0.364536 |
NA | Pro1248 | NADPH-dependent reductase | SubName: Full=NADPH-dependent reductase; | chromosome | CDS | 1149747 | 963 | - | 0.386293 |
NA | Pro0662 | NADPH-dependent reductase | SubName: Full=NADPH-dependent reductase; | chromosome | CDS | 610371 | 1065 | - | 0.391549 |
NA | Pro1563 | Adhesin-like protein | SubName: Full=Adhesin-like protein; | chromosome | CDS | 1424836 | 669 | + | 0.379671 |
NA | Pro0373 | LysM repeats containing protein | SubName: Full=LysM repeats containing protein; | chromosome | CDS | 360884 | 876 | - | 0.315068 |
NA | Pro0073 | cyanobacteria-specific protein related to lipid A disaccharide synthetase | SubName: Full=Cyanobacteria-specific protein related to lipid A disaccharide synthetase; | chromosome | CDS | 83662 | 1296 | - | 0.359568 |
NA | Pro1074 | Uncharacterized membrane protein | SubName: Full=Uncharacterized membrane protein; | chromosome | CDS | 996048 | 594 | + | 0.392256 |
NA | Pro1305 | Predicted membrane-associated Zn-dependent protease | SubName: Full=Predicted membrane-associated Zn-dependent protease; | chromosome | CDS | 1204654 | 1083 | + | 0.361958 |
GCD1 | Pro1320 | Nucleotidyl transferase family enzyme | SubName: Full=Nucleotidyl transferase family enzyme; | chromosome | CDS | 1221358 | 729 | + | 0.352538 |
GCD1 | Pro0175 | Nucleoside-diphosphate-sugar transferase | SubName: Full=Nucleoside-diphosphate-sugar transferase; | chromosome | CDS | 175769 | 1170 | + | 0.384615 |
acrA | Pro1233 | HlyD family secretion protein | SubName: Full=HlyD family secretion protein; | chromosome | CDS | 1135226 | 1062 | + | 0.365348 |
alr | Pro1681 | Alanine racemase | RecName: Full=Alanine racemase; EC=5.1.1.1; | chromosome | CDS | 1546581 | 1161 | - | 0.399655 |
amiC | Pro1044 | N-acetylmuramoyl-L-alanine amidase | SubName: Full=N-acetylmuramoyl-L-alanine amidase; | chromosome | CDS | 959664 | 1092 | - | 0.336996 |
arnT | Pro1293 | Glycosyltransferase of PMT family | SubName: Full=Glycosyltransferase of PMT family; | chromosome | CDS | 1193707 | 1821 | - | 0.34212 |
arnT | Pro0062 | Glycosyltransferase of PMT family | SubName: Full=Glycosyltransferase of PMT family; | chromosome | CDS | 70715 | 2340 | + | 0.299573 |
arnT | Pro0059 | Glycosyltransferase of PMT family | SubName: Full=Glycosyltransferase of PMT family; | chromosome | CDS | 66592 | 1599 | + | 0.302064 |
dacB | Pro0951 | D-alanyl-D-alanine carboxypeptidase | SubName: Full=D-alanyl-D-alanine carboxypeptidase; | chromosome | CDS | 868036 | 1266 | + | 0.28515 |
dapA | Pro1813 | Dihydrodipicolinate synthase | RecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; | chromosome | CDS | 1669718 | 909 | - | 0.412541 |
ddlA | Pro1380 | D-alanine-D-alanine ligase and related ATP-grasp enzymes | RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; | chromosome | CDS | 1284301 | 1056 | + | 0.362689 |
ddpX | Pro0829 | D-alanyl-D-alanine dipeptidase | SubName: Full=D-alanyl-D-alanine dipeptidase; | chromosome | CDS | 753064 | 678 | + | 0.408555 |
devB | Pro0820 | DevB-like secretion protein | SubName: Full=DevB-like secretion protein; | chromosome | CDS | 743688 | 855 | + | 0.353216 |
dgkA | Pro0208 | Diacylglycerol kinase | SubName: Full=Diacylglycerol kinase; | chromosome | CDS | 203336 | 462 | + | 0.357143 |
ftsI | Pro0041 | Cell division protein FtsI/penicillin-binding protein 2 | SubName: Full=Cell division protein FtsI/penicillin-binding protein 2; | chromosome | CDS | 39169 | 1788 | + | 0.361298 |
ftsI | Pro0518 | Cell division protein FtsI/penicillin-binding protein 2 | SubName: Full=Cell division protein FtsI/penicillin-binding protein 2; | chromosome | CDS | 493727 | 1803 | + | 0.391015 |
ftsQ | Pro1382 | Cell division protein FtsQ | SubName: Full=Cell division protein FtsQ; | chromosome | CDS | 1285778 | 819 | + | 0.349206 |
galE | Pro1314 | UDP-glucose 4-epimerase | SubName: Full=UDP-glucose 4-epimerase; | chromosome | CDS | 1214631 | 1044 | - | 0.356322 |
gidB | Pro1629 | Phosphoribulokinase | RecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.-; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; | chromosome | CDS | 1482894 | 762 | + | 0.366142 |
glf | Pro1286 | UDP-galactopyranose mutase | SubName: Full=UDP-galactopyranose mutase; | chromosome | CDS | 1185806 | 1113 | + | 0.357592 |
glmS | Pro1766 | Glucosamine 6-phosphate synthetase | RecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; | chromosome | CDS | 1620235 | 1905 | - | 0.376378 |
glmU | Pro1050 | N-acetylglucosamine-1-phosphateuridyltransferase | RecName: Full=Bifunctional protein GlmU; Includes: RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.7.7.23; AltName: Full=N-acetylglucosamine-1-phosphate uridyltransferase; Includes: RecName: Full=Glucosamine-1-phosphate N-acetyltransferase; EC=2.3.1.157; | chromosome | CDS | 966333 | 1359 | + | 0.36571 |
gmd | Pro0063 | GDP-D-mannose dehydratase | RecName: Full=GDP-mannose 4,6-dehydratase; EC=4.2.1.47; AltName: Full=GDP-D-mannose dehydratase; | chromosome | CDS | 73141 | 1128 | + | 0.388298 |
gumC | Pro1330 | Uncharacterized protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1231308 | 1758 | + | 0.342435 |
lepA | Pro0419 | Membrane GTPase LepA | RecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; | chromosome | CDS | 400642 | 1809 | + | 0.38419 |
lgt | Pro0458 | Prolipoprotein diacylglyceryltransferase | RecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; | chromosome | CDS | 440464 | 912 | - | 0.349781 |
lnt | Pro1366 | Apolipoprotein N-acyltransferase | RecName: Full=Apolipoprotein N-acyltransferase; Short=ALP N-acyltransferase; EC=2.3.1.-; | chromosome | CDS | 1268586 | 1485 | - | 0.402694 |
lpxA | Pro1416 | Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase | SubName: Full=Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; | chromosome | CDS | 1315075 | 855 | - | 0.395322 |
lpxB | Pro1415 | Lipid A disaccharide synthetase | SubName: Full=Lipid A disaccharide synthetase; | chromosome | CDS | 1313900 | 1173 | - | 0.370844 |
lpxC | Pro1418 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | SubName: Full=UDP-3-O-acyl-N-acetylglucosamine deacetylase; | chromosome | CDS | 1316382 | 867 | - | 0.402537 |
lpxD | Pro0863 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase | RecName: Full=UDP-3-O-acylglucosamine N-acyltransferase; EC=2.3.1.-; | chromosome | CDS | 786778 | 1038 | - | 0.342967 |
lspA | Pro1032 | Lipoprotein signal peptidase | RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; | chromosome | CDS | 946909 | 471 | + | 0.273885 |
lytB | Pro0296 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 287863 | 1218 | + | 0.372742 |
menC | Pro0200 | O-succinylbenzoate-CoA synthase | SubName: Full=O-succinylbenzoate-CoA synthase; | chromosome | CDS | 196740 | 972 | - | 0.385802 |
mrcB | Pro0423 | Membrane carboxypeptidase (penicillin-binding protein) | SubName: Full=Membrane carboxypeptidase (Penicillin-binding protein); | chromosome | CDS | 405968 | 1818 | - | 0.383938 |
mreC | Pro1782 | Cell shape-determining protein | SubName: Full=Cell shape-determining protein; | chromosome | CDS | 1635477 | 747 | - | 0.364123 |
mscS | Pro0792 | Small-conductance mechanosensitive channel | SubName: Full=Small-conductance mechanosensitive channel; | chromosome | CDS | 715924 | 1017 | - | 0.324484 |
murA | Pro1374 | UDP-N-acetylglucosamine enolpyruvyl transferase | RecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase 1; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase 1; Short=EPT 1; | chromosome | CDS | 1276078 | 1374 | + | 0.395924 |
murA | Pro1539 | UDP-N-acetylglucosamine enolpyruvyl transferase | RecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase 2; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase 2; Short=EPT 2; | chromosome | CDS | 1407516 | 1284 | - | 0.412773 |
murB | Pro0021 | UDP-N-acetylmuramate dehydrogenase | RecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; | chromosome | CDS | 22128 | 885 | - | 0.367232 |
murC | Pro0022 | UDP-N-acetylmuramate-alanine ligase | RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; | chromosome | CDS | 23017 | 1419 | - | 0.312896 |
murD | Pro1439 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; | chromosome | CDS | 1337319 | 1413 | + | 0.360934 |
murE | Pro0412 | UDP-N-acetylmuramyl tripeptide synthase | RecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13; AltName: Full=Meso-A2pm-adding enzyme; AltName: Full=Meso-diaminopimelate-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; | chromosome | CDS | 394752 | 1512 | + | 0.405423 |
murF | Pro1051 | UDP-N-acetylmuramyl pentapeptide synthase | RecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; | chromosome | CDS | 967688 | 1401 | - | 0.366167 |
murG | Pro0223 | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase | RecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; | chromosome | CDS | 220991 | 1074 | + | 0.382682 |
murI | Pro1043 | Glutamate racemase | RecName: Full=Glutamate racemase; EC=5.1.1.3; | chromosome | CDS | 958864 | 804 | - | 0.356965 |
prc | Pro1014 | Periplasmic protease | SubName: Full=Periplasmic protease; | chromosome | CDS | 931013 | 1344 | - | 0.327381 |
prc | Pro0366 | Periplasmic protease | SubName: Full=Periplasmic protease; | chromosome | CDS | 348504 | 1380 | - | 0.374638 |
rfaE | Pro1322 | ADP-heptose synthase | SubName: Full=ADP-heptose synthase; | chromosome | CDS | 1222693 | 1515 | + | 0.348515 |
rfaG | Pro1327 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 1227921 | 1107 | + | 0.331527 |
rfaG | Pro1392 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 1295550 | 1212 | - | 0.377063 |
rfaG | Pro0057 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 63339 | 1224 | + | 0.310458 |
rfaG | Pro1827 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 1683843 | 1155 | + | 0.399134 |
rfaG | Pro0394 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 378246 | 1158 | - | 0.379102 |
rfaG | Pro1880 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 1741024 | 1395 | - | 0.359857 |
rfaG | Pro0682 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 628144 | 1149 | - | 0.302002 |
rfaG | Pro1294 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 1195563 | 1089 | - | 0.392103 |
rfaG | Pro1329 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 1230051 | 1167 | + | 0.292202 |
rfaL | Pro1869 | Lipid A core O-antigen ligase related enzyme | SubName: Full=Lipid A core O-antigen ligase related enzyme; | chromosome | CDS | 1731226 | 1296 | - | 0.380401 |
rfe | Pro1878 | UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase | RecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; | chromosome | CDS | 1739674 | 1113 | + | 0.303684 |
rfe | Pro0680 | UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase | SubName: Full=UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; | chromosome | CDS | 626255 | 984 | - | 0.293699 |
spr | Pro1675 | Cell wall-associated hydrolase | SubName: Full=Cell wall-associated hydrolase; | chromosome | CDS | 1543060 | 753 | + | 0.351926 |
tolC | Pro0116 | Outer membrane efflux protein | SubName: Full=Outer membrane efflux protein; | chromosome | CDS | 122083 | 1626 | - | 0.292743 |
ugd | Pro1312 | UDP-glucose 6-dehydrogenase | SubName: Full=UDP-glucose 6-dehydrogenase; | chromosome | CDS | 1212167 | 1416 | - | 0.34322 |
vanY | Pro0833 | D-alanyl-D-alanine carboxypeptidase | SubName: Full=D-alanyl-D-alanine carboxypeptidase; | chromosome | CDS | 759211 | 759 | + | 0.380764 |
wcaA | Pro1325 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 1226040 | 885 | + | 0.311864 |
wcaA | Pro0727 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 660844 | 1197 | - | 0.380117 |
wcaA | Pro0824 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 746717 | 933 | + | 0.369775 |
wcaA | Pro0380 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 366770 | 954 | + | 0.321803 |
wcaA | Pro1328 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 1229035 | 984 | + | 0.302846 |
wcaA | Pro0060 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 68269 | 1395 | + | 0.342652 |
wcaA | Pro1676 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 1543842 | 951 | + | 0.334385 |
wcaA | Pro1326 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 1226928 | 960 | + | 0.296875 |
wcaA | Pro0565 | Glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 536360 | 711 | - | 0.319269 |
wcaG | Pro0064 | NAD dependent epimerase/dehydratase | RecName: Full=GDP-L-fucose synthase; EC=1.1.1.271; AltName: Full=GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; | chromosome | CDS | 74274 | 1014 | + | 0.321499 |
wcaG | Pro0873 | NAD dependent epimerase/dehydratase | SubName: Full=NAD dependent epimerase/dehydratase; | chromosome | CDS | 796099 | 903 | + | 0.339978 |
wcaG | Pro0030 | NAD dependent epimerase/dehydratase | SubName: Full=NAD dependent epimerase/dehydratase; | chromosome | CDS | 30137 | 894 | - | 0.383669 |
wcaG | Pro1282 | NAD dependent epimerase/dehydratase | SubName: Full=NAD dependent epimerase/dehydratase; | chromosome | CDS | 1182924 | 867 | + | 0.324106 |
wcaG | Pro1313 | NAD dependent epimerase/dehydratase | SubName: Full=NAD dependent epimerase/dehydratase; | chromosome | CDS | 1213586 | 924 | - | 0.358225 |
wcaG | Pro1315 | NAD dependent epimerase/dehydratase | SubName: Full=NAD dependent epimerase/dehydratase; | chromosome | CDS | 1215866 | 1026 | - | 0.351852 |
wcaG | Pro1080 | NAD dependent epimerase/dehydratase | SubName: Full=NAD dependent epimerase/dehydratase; | chromosome | CDS | 1002503 | 1023 | + | 0.350929 |
wcaG | Pro1826 | NAD dependent epimerase/dehydratase | SubName: Full=NAD dependent epimerase/dehydratase; | chromosome | CDS | 1682637 | 1197 | + | 0.40518 |
wcaG | Pro1323 | NAD dependent epimerase/dehydratase | SubName: Full=NAD dependent epimerase/dehydratase; | chromosome | CDS | 1224296 | 948 | + | 0.332278 |
wcaJ | Pro1391 | Sugar transferase | SubName: Full=Sugar transferase; | chromosome | CDS | 1294762 | 738 | - | 0.359079 |
wecE | Pro0316 | DegT/DnrJ/EryC1/StrS aminotransferase family enzyme | SubName: Full=DegT/DnrJ/EryC1/StrS aminotransferase family enzyme; | chromosome | CDS | 307512 | 1188 | + | 0.371212 |
wecE | Pro1456 | DegT/DnrJ/EryC1/StrS aminotransferase family enzyme | SubName: Full=DegT/DnrJ/EryC1/StrS aminotransferase family enzyme; | chromosome | CDS | 1349704 | 1191 | + | 0.337531 |
wza | Pro1316 | polysaccharide export-related periplasmic protein | SubName: Full=Polysaccharide export-related periplasmic protein; | chromosome | CDS | 1217122 | 1215 | + | 0.330864 |