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2024-05-03 10:32:40

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Leifsonia xyli subsp. xyli str. CTCB07, CTCB07

Number of genes found: 102

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Leifsonia xyli subsp. xyli str. CTCB07, CTCB07
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Lxx00190 membrane proteinchromosome CDS17919 750 + 0.636
NA Lxx17310 starvation-sensing protein Achromosome CDS1797440 906 - 0.710817
NA Lxx18880 phosphinothricin acetyltransferase proteinchromosome CDS1947796 579 - 0.62867
NA Lxx00230 penicillin binding protein, transpeptidase domainchromosome CDS22985 1422 - 0.64135
NA Lxx17740 hypothetical proteinchromosome CDS1838868 501 - 0.704591
NA Lxx04970 rhamnosyltransferasechromosome CDS495575 966 + 0.650104
NA Lxx15650 nucleoside-diphosphate-sugar epimerasechromosome CDS1627602 1491 - 0.718981
NA Lxx14000 N-acetyl-glucosamine transferasechromosome CDS1446576 1350 + 0.622222
NA Lxx17870 membrane proteinchromosome CDS1852497 564 - 0.671986
NA Lxx23160 hypothetical proteinchromosome CDS2385225 216 - 0.694444
NA Lxx07485 secreted proteinchromosome CDS746450 1059 + 0.638338
NA Lxx04910 thymidine diphosphoglucose 4,6-dehydratasechromosome CDS489801 990 - 0.665657
NA Lxx02040 dolichyl-phosphate mannose synthasechromosome CDS198580 1497 - 0.685371
NA Lxx20375 glycosyltransferasechromosome CDS2085485 741 - 0.662618
NA Lxx13680 lipopolysaccharide exporterchromosome CDS1417522 735 + 0.653061
NA Lxx21540 peptidoglycan lytic protein P45chromosome CDS2214764 1203 - 0.679136
NA Lxx05030 lysozymechromosome CDS501087 2316 - 0.665371
NA Lxx22710 lysozymechromosome CDS2343519 726 - 0.586777
NA Lxx15870 conserved ypothetical proteinchromosome CDS1651385 231 - 0.692641
NA Lxx01230 glycosyltransferasechromosome CDS120874 876 + 0.697489
NA Lxx12840 glycosyltransferasechromosome CDS1336008 642 - 0.668224
NA Lxx21080 N-acetyl-glucosamine transferasechromosome CDS2162572 1344 - 0.681548
NA Lxx22790 conserved hypothetical proteinchromosome CDS2352552 357 - 0.761905
NA Lxx20370 glycosyltransferasechromosome CDS2084173 1248 - 0.701122
NA Lxx19300 conserved hypothetical proteinchromosome CDS1991195 765 + 0.688889
NA Lxx21550 cell wall binding proteinchromosome CDS2216031 1218 - 0.711002
NA Lxx08630 glucosyltransferasechromosome CDS873429 1257 + 0.669849
NA Lxx23220 glucosaminyltransferasechromosome CDS2389513 1266 + 0.672196
NA Lxx15390 lipoproteinchromosome CDS1601604 1062 + 0.716573
NA Lxx03900 hypothetical proteinchromosome CDS394141 558 - 0.648746
NA Lxx06160 galactosyltransferasechromosome CDS625754 1056 + 0.688447
NA Lxx23990 hypothetical proteinchromosome CDS2460796 597 + 0.680067
NA Lxx16700 conserved hypothetical proteinchromosome CDS1736846 903 - 0.703212
NA Lxx07795 lysozymechromosome CDS786215 957 - 0.601881
NA Lxx18740 RHS-related proteinchromosome CDS1933207 3120 + 0.715064
NA Lxx12190 zinc metalloproteasechromosome CDS1267322 1332 + 0.674925
NA Lxx14700 NAD dependent epimerase/dehydratasechromosome CDS1526254 966 + 0.731884
NA Lxx14024 N-acetyl-glucosamine transferasechromosome CDS1449434 1419 - 0.535588
NA Lxx15320 penicillin binding protein, transpeptidase domainchromosome CDS1595222 1743 - 0.661503
NA Lxx06550 conserved hypothetical proteinchromosome CDS654210 909 - 0.683168
NA Lxx04890 mannosyltransferasechromosome CDS487782 1134 - 0.732804
NA Lxx14026 UDP-N-acetylglucosamine 2-epimerasechromosome CDS1451176 1050 - 0.589524
alr Lxx10340 alanine racemasechromosome CDS1053573 1113 - 0.744834
alr Lxx10330 alanine racemasechromosome CDS1054682 711 - 0.729958
alr Lxx19950 alanine racemasechromosome CDS2056511 1119 - 0.742627
bplE Lxx05100 glycosyltransferasechromosome CDS511383 1182 - 0.660744
dapA Lxx10270 dihydrodipicolinate synthasechromosome CDS1049885 933 - 0.703108
ddlA Lxx09710 D-alanine:D-alanine ligasechromosome CDS993940 894 + 0.696868
exoA Lxx13720 glucosyltransferasechromosome CDS1421699 1053 + 0.678063
exoB Lxx05210 UDP-glucose 4-epimerasechromosome CDS521864 963 + 0.683281
exoQ Lxx05160 exopolysaccharide production proteinchromosome CDS517251 1350 - 0.706667
ftsQ Lxx15240 cell division proteinchromosome CDS1584906 882 - 0.713152
galE Lxx04960 UDP-glucose 4-epimerasechromosome CDS494638 927 + 0.6548
galU Lxx05910 UTP-glucose-1-phosphate uridylyltransferasechromosome CDS600703 972 + 0.682099
gidB Lxx25255 glucose-inhibited division protein Bchromosome CDS2580885 630 - 0.603175
glmS Lxx19980 glucosamine--fructose-6-phosphateaminotransferas echromosome CDS2057988 1851 - 0.685575
glmU Lxx17430 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS1809391 1476 - 0.711382
lepA Lxx14690 GTP-binding protein elongation factorchromosome CDS1524052 1851 - 0.656942
lgt Lxx11310 prolipoprotein diacylglyceryl transferasechromosome CDS1156338 1005 + 0.658706
lnt Lxx08350 apolipoprotein N-acyltransferasechromosome CDS841193 1599 + 0.684178
lspA Lxx15175 signal peptidase IIchromosome CDS1580409 513 - 0.664717
lytB Lxx16760 penicillin-tolerance proteinchromosome CDS1741972 1014 - 0.690335
manC Lxx04570 mannose-1-phosphate guanylyltransferasechromosome CDS454351 1149 - 0.704961
menC Lxx01430 O-succinylbenzoate-CoA synthasechromosome CDS141955 993 - 0.708963
mraW Lxx15340 S-adenosyl-methyltransferasechromosome CDS1597668 978 - 0.714724
mrc Lxx23190 penicillin-binding proteinchromosome CDS2386160 1206 - 0.666667
mscL Lxx05890 large-conductance mechanosensitive channelchromosome CDS599276 438 - 0.625571
mscS Lxx08720 small-conductance mechanosensitive channelchromosome CDS880750 1173 - 0.670077
mtfB Lxx11850 mannosyltransferasechromosome CDS1219569 1083 + 0.690674
murA Lxx09670 UDP-N-acetylglucosamine enolpyruvyl transferasechromosome CDS990541 1371 + 0.673231
murB Lxx02830 UDP-N-acetylmuramate dehydrogenasechromosome CDS285610 1137 + 0.719437
murC Lxx15250 UDP-N-acetylmuramate-alanine ligasechromosome CDS1585875 1395 - 0.686022
murC Lxx10200 UDP-N-acetylmuramyl tripeptide synthetasechromosome CDS1044905 1275 + 0.690196
murD Lxx15280 UDP-N-acetylmuramoylalanine-D-glutamate ligasechromosome CDS1589576 1554 - 0.698198
murE Lxx15310 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligasechromosome CDS1593666 1545 - 0.719741
murF Lxx15300 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-alanyl ligasechromosome CDS1592238 1428 - 0.693978
murG Lxx15260 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferasechromosome CDS1587329 1077 - 0.741876
murI Lxx13590 glutamate racemasechromosome CDS1410566 819 - 0.675214
murX Lxx15290 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS1591126 1116 - 0.665771
pbp Lxx04140 D-alanyl-D-alanine carboxypeptidasechromosome CDS416091 1419 + 0.703312
pbpA Lxx11900 D-alanyl-D-alanine endopeptidasechromosome CDS1224372 1185 + 0.676793
pglA Lxx07750 endopolygalacturonasechromosome CDS778148 1491 + 0.688129
pon1 Lxx05450 penicillin-binding proteinchromosome CDS549673 2502 + 0.653877
ponA Lxx03600 penicillin-binding proteinchromosome CDS362055 2559 - 0.642829
ponA Lxx02090 penicillin-binding proteinchromosome CDS204175 2313 + 0.64505
proX Lxx12280 ABC-type glycine betaine transport, substrate-binding proteinchromosome CDS1277510 954 + 0.632075
rfbA Lxx13670 lipopolysaccharide exporterchromosome CDS1416638 885 + 0.636158
rfbA Lxx05020 lipopolysaccharide exporterchromosome CDS500036 936 - 0.628205
rfbB Lxx05010 lipopolysaccharide exporterchromosome CDS498823 1203 - 0.638404
rfbD Lxx05090 dTDP-4-dehydrorhamnose reductasechromosome CDS510466 906 - 0.646799
rfe Lxx06970 undecaprenyl-phosphatealpha-N-acetylglucosaminyltransferasechromosome CDS698263 1269 + 0.661939
rgpB Lxx05140 rhamnosyltransferasechromosome CDS514972 987 + 0.687943
rmlA Lxx04930 glucose-1-phosphate thymidylyltransferasechromosome CDS491500 864 + 0.65625
rmlC Lxx04920 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS490878 606 + 0.673267
strL Lxx04900 dTDP-4-dehydrorhamnose reductasechromosome CDS488902 888 - 0.701577
tagA Lxx21780 UDP-N-acetyl-D-mannosaminuronic acid transferasechromosome CDS2241448 648 + 0.725309
tagF Lxx17460 teichoic acid synthasechromosome CDS1811632 2502 + 0.685452
udgA Lxx03520 UDP-glucose 6-dehydrogenasechromosome CDS348959 1308 + 0.70107
wbjB Lxx05080 polysaccharide biosynthesis proteinchromosome CDS509438 1032 - 0.641473
wbjD Lxx05070 O-antigen biosynthesis proteinchromosome CDS508317 1125 - 0.652444
wecB Lxx21100 UDP-N-acetylglucosamine 2-epimerasechromosome CDS2163912 1149 - 0.704961
ycbB Lxx05130 dolichyl-phosphate mannose synthasechromosome CDS514172 738 - 0.676152