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2024-05-15 19:20:26

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Lactobacillus sakei subsp. sakei 23K, 23K

Number of genes found: 93

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Lactobacillus sakei subsp. sakei 23K, 23K
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA LSA1206 Putative glycosyl transferase, group 1SubName: Full=Putative glycosyl transferase, group 1; chromosome CDS1188786 1059 + 0.421152
NA LSA0194 Hypothetical cell surface protein precursorSubName: Full=Hypothetical cell surface protein; chromosome CDS186239 1347 - 0.431329
NA LSA0116 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS108324 252 + 0.444444
NA LSA1053 Putative cinnamoyl-CoA reductase (oxidoreductase)SubName: Full=Putative cinnamoyl-CoA reductase (Oxidoreductase); chromosome CDS1047385 1029 - 0.432459
NA LSA1519 Putative teichoic acid/polysaccharide glycosyl transferase, family 2SubName: Full=Putative teichoic acid/polysaccharide glycosyl transferase, family 2; chromosome CDS1493231 933 + 0.418006
NA LSA1246 Putative glycosyl transferase, family 2SubName: Full=Putative glycosyl transferase, family 2; chromosome CDS1223964 1320 - 0.418939
NA LSA0461 Putative glycosyl transferase, group 1SubName: Full=Putative glycosyl transferase, group 1; chromosome CDS472169 1203 + 0.419784
NA LSA0315 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS319948 642 - 0.465732
NA LSA1573 Putative teichoic acid/polysaccharide glycosyl transferase, group 1SubName: Full=Putative teichoic acid/polysaccharide glycosyl transferase, group 1; chromosome CDS1547354 1077 - 0.406685
NA LSA0228 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS225117 600 + 0.455
NA LSA0465 Putative phosphoglycerol transferaseSubName: Full=Putative phosphoglycerol transferase; chromosome CDS475882 2058 + 0.400875
NA LSA1819 Hypothetical cell surface protein precursorSubName: Full=Hypothetical cell surface protein; chromosome CDS1810329 882 - 0.407029
NA LSA1510_f Putative glycosyl transferase, family 8SubName: Full=Putative glycosyl transferase, family 8; chromosome CDS1484685 915 - 0.296175
NA LSA1474 Putative bifunctional glycosyl transferase, family 8SubName: Full=Putative bifunctional glycosyl transferase, family 8; chromosome CDS1450436 1710 + 0.408187
NA LSA0264 Putative glycine/betaine/carnitine/choline transport proteinSubName: Full=Putative glycine/betaine/carnitine/choline transport protein; chromosome CDS258582 1530 - 0.439869
NA LSA0510 L-threonine dehydrogenase (N-terminal fragment), authentic frameshiftSubName: Full=L-threonine dehydrogenase (N-terminal), authentic frameshift; EC=1.1.1.103; chromosome CDS528968 264 + 0.431818
NA LSA1585 Putative teichoic acid/polysaccharide phosphoglycerol transferaseSubName: Full=Putative teichoic acid/polysaccharide phosphoglycerol transferase; chromosome CDS1561596 2040 - 0.346569
NA LSA1581 Putative teichoic acid-binding N-acetylmuramoyl L-alalanine amidase (cell wall hydrolase)SubName: Full=Putative teichoic acid-binding N-acetylmuramoyl L-alalanine amidase (Cell wall hydrolase); EC=3.5.1.28; chromosome CDS1557090 2085 - 0.397602
NA LSA0160 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS154294 918 - 0.424837
NA LSA0162 Putative Bifunctional glycosyl transferase, family 8SubName: Full=Putative Bifunctional glycosyl transferase, family 8; chromosome CDS155691 1701 - 0.398001
NA LSA0536 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS559648 645 + 0.43876
NA LSA1139 Putative UDP-N-acetylmuramyl peptide synthetaseSubName: Full=Putative UDP-N-acetylmuramyl peptide synthetase; chromosome CDS1126340 1350 + 0.422222
NA LSA0313 Hypothetical cell surface protein precursorSubName: Full=Hypothetical cell surface protein; chromosome CDS317566 1542 + 0.453307
NA LSA1408 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1375706 786 - 0.419847
NA LSA1510_d Putative Glycosyl transferase, family 2SubName: Full=Putative Glycosyl transferase, family 2; chromosome CDS1482616 981 - 0.27421
NA LSA1538 Putative extracellular glycosyl hydrolase precursor, family 25 (Lysosyme M1 family)SubName: Full=Putative extracellular glycosyl hydrolase, family 25 (Lysosyme M1 family); EC=3.2.1.17; chromosome CDS1508863 750 - 0.450667
NA LSA0991 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS984534 867 - 0.426759
NA LSA1869 Putative glycine/betaine/carnitine/choline ABC transporter, substrate binding and membrane-spanning subunitsSubName: Full=Putative glycine/betaine/carnitine/choline ABC transporter, substrate binding and membrane-spanning subunits; chromosome CDS1854136 1527 - 0.469548
NA LSA0511 L-threonine dehydrogenase (C-terminal fragment), authentic frameshiftSubName: Full=L-threonine dehydrogenase (C-terminal), authentic frameshift; EC=1.1.1.103; chromosome CDS529250 666 + 0.423423
NA LSA1788 Putative phage-related 1,4-beta-N-acetyl muramidase (cell wall hydrolase)SubName: Full=Putative phage-related 1,4-beta-N-acetyl muramidase (Cell wall hydrolase); EC=3.2.1.17; chromosome CDS1772421 759 - 0.42029
NA LSA1019 Hypothetical cell surface protein precursorSubName: Full=Hypothetical cell surface protein; chromosome CDS1009695 702 - 0.431624
NA LSA0106 Hypothetical cell surface protein precursorSubName: Full=Hypothetical cell surface protein; chromosome CDS100870 1275 + 0.398431
NA LSA1207 Putative phosphoglycerol transferaseSubName: Full=Putative phosphoglycerol transferase; chromosome CDS1189948 2178 + 0.406336
NA LSA1510_e Putative glycosyl transferase, group 1SubName: Full=Putative glycosyl transferase, group 1; chromosome CDS1483603 1065 - 0.299531
NA LSA1510_g Putative priming glycosyl transferaseSubName: Full=Putative priming glycosyl transferase; chromosome CDS1485657 696 - 0.375
NA LSA0410 Putative mechanosensitive ion chanelSubName: Full=Putative mechanosensitive ion chanel; chromosome CDS418486 888 - 0.442568
NA LSA1512 Putative polysaccharide biosynthesis protein, chain length determinationSubName: Full=Putative polysaccharide biosynthesis protein, chain length determination; chromosome CDS1487128 741 - 0.321188
NA LSA1638 Putative large conductance mechanosensitive channelRecName: Full=Large-conductance mechanosensitive channel; chromosome CDS1623140 399 + 0.398496
NA LSA0618 Putative glycine/betaine/carnitine/choline ABC transporter, substrate-binding lipoprotein precursorSubName: Full=Putative glycine/betaine/carnitine/choline ABC transporter, substrate-binding lipoprotein; chromosome CDS619611 936 + 0.456197
NA LSA0210 Choloylglycine hydrolase (Bile salt hydrolase)SubName: Full=Choloylglycine hydrolase (Bile salt hydrolase); EC=3.5.1.24; chromosome CDS203428 993 + 0.418933
NA LSA1193 Putative oxidoreductaseSubName: Full=Putative oxidoreductase; chromosome CDS1175147 639 - 0.442879
NA LSA0115 Hypothetical cell surface protein precursorSubName: Full=Hypothetical cell surface protein; chromosome CDS107334 771 + 0.411154
NA LSA0118 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS108609 2202 + 0.447321
NA LSA0743 PutativeS-adenosylmethionine-dependent-methyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; chromosome CDS737357 957 + 0.406479
NA LSA1258 Putative membrane-associated zinc metalloendopeptidaseSubName: Full=Putative membrane-associated zinc metalloendopeptidase; EC=3.4.24.-; chromosome CDS1239741 1278 - 0.428795
NA LSA0631 Aminoglycoside phosphotransferaseSubName: Full=Aminoglycoside phosphotransferase; chromosome CDS633989 795 + 0.412579
NA LSA1437 N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase) (Autolysin)SubName: Full=N-acetylmuramoyl-L-alanine amidase (Cell wall hydrolase) (Autolysin); EC=3.5.1.28; chromosome CDS1411165 2007 - 0.397608
NA LSA1572 Putative teichoic acid/polysaccharide glycosyl transferase, family 2SubName: Full=Putative teichoic acid/polysaccharide glycosyl transferase, family 2; chromosome CDS1546380 954 - 0.379455
NA LSA0840 Putative glutamate-cysteine ligaseRecName: Full=Glutathione biosynthesis bifunctional protein GshAB; AltName: Full=Gamma-GCS-GS; chromosome CDS825971 2280 + 0.430702
alr LSA1613 Alanine racemaseRecName: Full=Alanine racemase; EC=5.1.1.1; chromosome CDS1598851 1143 - 0.427822
cfa LSA0045 Cyclopropane-fatty-acyl-phospholipid synthaseSubName: Full=Cyclopropane-fatty-acyl-phospholipid synthase; EC=2.1.1.79; chromosome CDS41152 1188 - 0.41835
dacA LSA0279 D-alanyl-D-alanine carboxypeptidase precursorSubName: Full=D-alanyl-D-alanine carboxypeptidase; EC=3.4.16.4; chromosome CDS274535 1287 + 0.453768
ddl LSA0049 D-alanine--D-alanine ligase (D-alanylalanine synthetase)RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; chromosome CDS44293 1053 - 0.407407
dgkA LSA0877 Diacylglycerol kinaseSubName: Full=Diacylglycerol kinase; EC=2.7.1.107; chromosome CDS863501 402 + 0.400498
dltB LSA0396 D-alanyl transfer protein (membrane protein)SubName: Full=D-alanyl transfer protein (Membrane protein); chromosome CDS405437 1209 + 0.383788
dltD LSA0398 Lipoteichoic acid D-alanyl esterase precursorSubName: Full=Lipoteichoic acid D-alanyl esterase; chromosome CDS406913 1272 + 0.410377
ftsQ LSA0749 Cell division protein, FtsQRecName: Full=Cell division protein DivIB; chromosome CDS744347 861 + 0.373984
galE1 LSA0765 UDP-glucose 4-epimeraseSubName: Full=UDP-glucose 4-epimerase; EC=5.1.3.2; chromosome CDS760591 993 + 0.448137
galE2 LSA1280 UDP-glucose 4-epimeraseSubName: Full=UDP-glucose 4-epimerase; EC=5.1.3.2; chromosome CDS1260176 993 + 0.446123
galU LSA1507 UTP--glucose-1-phosphate uridylyltransferaseSubName: Full=UTP--glucose-1-phosphate uridylyltransferase; EC=2.7.7.9; chromosome CDS1475623 903 - 0.385382
gidB LSA0014 Methyltransferase GidB (Glucose Inhibited Cell Division protein B)RecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.-; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; chromosome CDS16777 741 + 0.419703
glmS LSA1355 L-glutamine--D-fructose-6-phosphate amidotransferase (Glucosamine-6-phosphate synthetase)RecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; chromosome CDS1323949 1815 - 0.425344
glmU LSA1648 UDP-N-acetylglucosamine pyrophosphorylase / N-acetylglucosamine-1-phosphate uridyltransferaseRecName: Full=Bifunctional protein GlmU; Includes: RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.7.7.23; AltName: Full=N-acetylglucosamine-1-phosphate uridyltransferase; Includes: RecName: Full=Glucosamine-1-phosphate N-acetyltransferase; EC=2.3.1.157; chromosome CDS1632935 1389 - 0.418287
lepA LSA1290 GTPase LepARecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; chromosome CDS1268339 1839 - 0.424144
lgt LSA0517 Prolipoprotein diacylglyceryl transferaseRecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; chromosome CDS533685 837 + 0.434886
lspA LSA0948 Signal peptidase II (Lipoprotein signal peptidase) (Prolipoprotein signal peptidase)RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS935242 456 + 0.403509
mnaA LSA1520 UDP-N-acetylglucosamine 2-epimeraseRecName: Full=UDP-N-acetylglucosamine 2-epimerase; EC=5.1.3.14; chromosome CDS1494222 1140 - 0.416667
mraY LSA0746 Phospho-N-acetylmuramoyl-pentapeptide-transferaseRecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; chromosome CDS740867 963 + 0.400831
mreC LSA0854 Cell shape determining lipoprotein precursorRecName: Full=Cell shape-determining protein MreC; AltName: Full=Cell shape protein MreC; chromosome CDS842632 861 + 0.383275
mreD LSA0855 Cell shape determining proteinSubName: Full=Cell shape determining protein; chromosome CDS843479 546 + 0.346154
murA1 LSA1123 UDP-N-acetylglucosamine 1-carboxyvinyltransferase IRecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase 1; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase 1; Short=EPT 1; chromosome CDS1111924 1302 - 0.433948
murA2 LSA1628 UDP-N-acetylglucosamine 1-carboxyvinyltransferase IIRecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase 2; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase 2; Short=EPT 2; chromosome CDS1612355 1260 - 0.431746
murB LSA1337 UDP-N-acetylpyruvoylglucosamine reductaseRecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; chromosome CDS1308829 912 - 0.425439
murC LSA0637 UDP-N-acetylmuranoyl-L-alanine synthetaseRecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; chromosome CDS639369 1335 + 0.395506
murD LSA0747 UDP-N-acetylmuramoylalanine--D-glutamateligaseRecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; chromosome CDS741845 1365 + 0.424908
murE LSA0280 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligaseRecName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; EC=6.3.2.-; AltName: Full=UDP-MurNAc-tripeptide synthetase; chromosome CDS275970 1542 + 0.445525
murF LSA1616 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligaseRecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; chromosome CDS1602350 1377 - 0.425563
murG LSA0748 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferaseRecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; chromosome CDS743234 1092 + 0.401099
murI LSA0405 Glutamate racemaseRecName: Full=Glutamate racemase; EC=5.1.1.3; chromosome CDS414104 825 + 0.476364
nanA LSA1640 N-acetylneuraminate lyaseSubName: Full=N-acetylneuraminate lyase; EC=4.1.3.3; chromosome CDS1624703 918 - 0.374728
pbp1A LSA0917 Bifunctional glycosyltransferase/transpeptidase penicillin-binding protein 1ASubName: Full=Bifunctional glycosyltransferase/transpeptidase penicillin-binding protein 1A; chromosome CDS907714 2304 - 0.422309
pbp1B LSA0416 Bifunctional glycosyltransferase/transpeptidase penicillin-binding protein 1BSubName: Full=Bifunctional glycosyltransferase/transpeptidase penicillin-binding protein 1B; chromosome CDS423183 2556 - 0.406103
pbp2A LSA0621 Bifunctional glycolsyltransferase/transpeptidase penicillin binding protein 2ASubName: Full=Bifunctional glycolsyltransferase/transpeptidase penicillin binding protein 2A; chromosome CDS622364 2082 + 0.434678
pbp2B1 LSA0745 Bifunctional dimerisation/transpeptidase penicillin-binding 2BSubName: Full=Bifunctional dimerisation/transpeptidase penicillin-binding 2B; chromosome CDS738762 2073 + 0.425953
pbp2B2 LSA1334 Bifuntional dimerisation/transpeptidase penicillin-binding protein 2BSubName: Full=Bifuntional dimerisation/transpeptidase penicillin-binding protein 2B; chromosome CDS1301490 2115 - 0.417021
racD LSA0099 Aspartate racemaseSubName: Full=Aspartate racemase; EC=5.1.1.13; chromosome CDS96063 717 + 0.423989
rfbB LSA1495 Putative dTDP-glucose 4,6-dehydrataseRecName: Full=dTDP-glucose 4,6-dehydratase; EC=4.2.1.46; chromosome CDS1467578 1005 - 0.447761
srtA1 LSA0066 Putative surface protein transpeptidase 1 precursor (Sortase 1)SubName: Full=Putative surface protein transpeptidase 1 (Sortase 1); chromosome CDS62931 663 + 0.408748
srtA2 LSA1591 Putative surface protein transpeptidase 2 (Sortase 2)SubName: Full=Putative surface protein transpeptidase 2 (Sortase 2); chromosome CDS1567975 597 - 0.463987
tagA LSA1571 N-acetylglucosamyldiphospho-undecaprenol-N- acetyl-beta-D-mannosaminyltransferase (Teichoic acid biosynthesis protein A)SubName: Full=N-acetylglucosamyldiphospho-undecaprenol-N-acetyl-beta-D-mannosaminyltransferase (Teichoic acid biosynthesis protein A); EC=2.4.1.187; chromosome CDS1545608 729 + 0.406036
tagB LSA1576 CDP-glycerol:glycerophosphate glycerophosphotransferase (Teichoic acid biosynthesis protein B)SubName: Full=CDP-glycerol:glycerophosphate glycerophosphotransferase (Teichoic acid biosynthesis protein B); EC=2.7.8.-; chromosome CDS1550263 1146 - 0.379581
tagD LSA1574 Glycerol-3-phosphate cytidyltransferase (CDP-glycerol pyrophosphorylase) (Teichoic acid biosynthesis protein D)SubName: Full=Glycerol-3-phosphate cytidyltransferase (CDP-glycerol pyrophosphorylase) (Teichoic acid biosynthesis protein D); EC=2.7.7.39; chromosome CDS1548453 387 - 0.343669
tagO LSA0490 Undecaprenyl-phosphate N-acetyl-glucosaminyl transferaseSubName: Full=Undecaprenyl-phosphate N-acetyl-glucosaminyl transferase; EC=2.4.1.-; chromosome CDS508094 1098 + 0.410747