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2024-04-29 08:55:34

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Lactobacillus sakei subsp. sakei 23K, 23K

Number of genes found: 93

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Lactobacillus sakei subsp. sakei 23K, 23K
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LSA1581 Putative teichoic acid-binding N-acetylmuramoyl L-alalanine amidase (cell wall hydrolase)chromosome CDS1557090 2085 - 0.397602
NA LSA1474 Putative bifunctional glycosyl transferase, family 8chromosome CDS1450436 1710 + 0.408187
NA LSA1408 Hypothetical proteinchromosome CDS1375706 786 - 0.419847
NA LSA0118 Hypothetical proteinchromosome CDS108609 2202 + 0.447321
NA LSA0315 Hypothetical proteinchromosome CDS319948 642 - 0.465732
NA LSA0461 Putative glycosyl transferase, group 1chromosome CDS472169 1203 + 0.419784
NA LSA0264 Putative glycine/betaine/carnitine/choline transport proteinchromosome CDS258582 1530 - 0.439869
NA LSA0743 PutativeS-adenosylmethionine-dependent-methyltransferasechromosome CDS737357 957 + 0.406479
NA LSA1510_f Putative glycosyl transferase, family 8chromosome CDS1484685 915 - 0.296175
NA LSA0116 Hypothetical proteinchromosome CDS108324 252 + 0.444444
NA LSA1585 Putative teichoic acid/polysaccharide phosphoglycerol transferasechromosome CDS1561596 2040 - 0.346569
NA LSA0536 Hypothetical proteinchromosome CDS559648 645 + 0.43876
NA LSA1638 Putative large conductance mechanosensitive channelchromosome CDS1623140 399 + 0.398496
NA LSA0631 Aminoglycoside phosphotransferasechromosome CDS633989 795 + 0.412579
NA LSA1258 Putative membrane-associated zinc metalloendopeptidasechromosome CDS1239741 1278 - 0.428795
NA LSA1538 Putative extracellular glycosyl hydrolase precursor, family 25 (Lysosyme M1 family)chromosome CDS1508863 750 - 0.450667
NA LSA0511 L-threonine dehydrogenase (C-terminal fragment), authentic frameshiftchromosome CDS529250 666 + 0.423423
NA LSA0465 Putative phosphoglycerol transferasechromosome CDS475882 2058 + 0.400875
NA LSA1510_e Putative glycosyl transferase, group 1chromosome CDS1483603 1065 - 0.299531
NA LSA1510_d Putative Glycosyl transferase, family 2chromosome CDS1482616 981 - 0.27421
NA LSA1437 N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase) (Autolysin)chromosome CDS1411165 2007 - 0.397608
NA LSA1193 Putative oxidoreductasechromosome CDS1175147 639 - 0.442879
NA LSA1139 Putative UDP-N-acetylmuramyl peptide synthetasechromosome CDS1126340 1350 + 0.422222
NA LSA1819 Hypothetical cell surface protein precursorchromosome CDS1810329 882 - 0.407029
NA LSA0991 Hypothetical proteinchromosome CDS984534 867 - 0.426759
NA LSA0228 Hypothetical proteinchromosome CDS225117 600 + 0.455
NA LSA1788 Putative phage-related 1,4-beta-N-acetyl muramidase (cell wall hydrolase)chromosome CDS1772421 759 - 0.42029
NA LSA1510_g Putative priming glycosyl transferasechromosome CDS1485657 696 - 0.375
NA LSA1869 Putative glycine/betaine/carnitine/choline ABC transporter, substrate binding and membrane-spanning subunitschromosome CDS1854136 1527 - 0.469548
NA LSA0106 Hypothetical cell surface protein precursorchromosome CDS100870 1275 + 0.398431
NA LSA0162 Putative Bifunctional glycosyl transferase, family 8chromosome CDS155691 1701 - 0.398001
NA LSA1246 Putative glycosyl transferase, family 2chromosome CDS1223964 1320 - 0.418939
NA LSA0410 Putative mechanosensitive ion chanelchromosome CDS418486 888 - 0.442568
NA LSA1207 Putative phosphoglycerol transferasechromosome CDS1189948 2178 + 0.406336
NA LSA0210 Choloylglycine hydrolase (Bile salt hydrolase)chromosome CDS203428 993 + 0.418933
NA LSA1053 Putative cinnamoyl-CoA reductase (oxidoreductase)chromosome CDS1047385 1029 - 0.432459
NA LSA0160 Hypothetical proteinchromosome CDS154294 918 - 0.424837
NA LSA0194 Hypothetical cell surface protein precursorchromosome CDS186239 1347 - 0.431329
NA LSA1512 Putative polysaccharide biosynthesis protein, chain length determinationchromosome CDS1487128 741 - 0.321188
NA LSA1573 Putative teichoic acid/polysaccharide glycosyl transferase, group 1chromosome CDS1547354 1077 - 0.406685
NA LSA0313 Hypothetical cell surface protein precursorchromosome CDS317566 1542 + 0.453307
NA LSA1206 Putative glycosyl transferase, group 1chromosome CDS1188786 1059 + 0.421152
NA LSA0115 Hypothetical cell surface protein precursorchromosome CDS107334 771 + 0.411154
NA LSA0618 Putative glycine/betaine/carnitine/choline ABC transporter, substrate-binding lipoprotein precursorchromosome CDS619611 936 + 0.456197
NA LSA1572 Putative teichoic acid/polysaccharide glycosyl transferase, family 2chromosome CDS1546380 954 - 0.379455
NA LSA0510 L-threonine dehydrogenase (N-terminal fragment), authentic frameshiftchromosome CDS528968 264 + 0.431818
NA LSA1019 Hypothetical cell surface protein precursorchromosome CDS1009695 702 - 0.431624
NA LSA1519 Putative teichoic acid/polysaccharide glycosyl transferase, family 2chromosome CDS1493231 933 + 0.418006
NA LSA0840 Putative glutamate-cysteine ligasechromosome CDS825971 2280 + 0.430702
alr LSA1613 Alanine racemasechromosome CDS1598851 1143 - 0.427822
cfa LSA0045 Cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS41152 1188 - 0.41835
dacA LSA0279 D-alanyl-D-alanine carboxypeptidase precursorchromosome CDS274535 1287 + 0.453768
ddl LSA0049 D-alanine--D-alanine ligase (D-alanylalanine synthetase)chromosome CDS44293 1053 - 0.407407
dgkA LSA0877 Diacylglycerol kinasechromosome CDS863501 402 + 0.400498
dltB LSA0396 D-alanyl transfer protein (membrane protein)chromosome CDS405437 1209 + 0.383788
dltD LSA0398 Lipoteichoic acid D-alanyl esterase precursorchromosome CDS406913 1272 + 0.410377
ftsQ LSA0749 Cell division protein, FtsQchromosome CDS744347 861 + 0.373984
galE1 LSA0765 UDP-glucose 4-epimerasechromosome CDS760591 993 + 0.448137
galE2 LSA1280 UDP-glucose 4-epimerasechromosome CDS1260176 993 + 0.446123
galU LSA1507 UTP--glucose-1-phosphate uridylyltransferasechromosome CDS1475623 903 - 0.385382
gidB LSA0014 Methyltransferase GidB (Glucose Inhibited Cell Division protein B)chromosome CDS16777 741 + 0.419703
glmS LSA1355 L-glutamine--D-fructose-6-phosphate amidotransferase (Glucosamine-6-phosphate synthetase)chromosome CDS1323949 1815 - 0.425344
glmU LSA1648 UDP-N-acetylglucosamine pyrophosphorylase / N-acetylglucosamine-1-phosphate uridyltransferasechromosome CDS1632935 1389 - 0.418287
lepA LSA1290 GTPase LepAchromosome CDS1268339 1839 - 0.424144
lgt LSA0517 Prolipoprotein diacylglyceryl transferasechromosome CDS533685 837 + 0.434886
lspA LSA0948 Signal peptidase II (Lipoprotein signal peptidase) (Prolipoprotein signal peptidase)chromosome CDS935242 456 + 0.403509
mnaA LSA1520 UDP-N-acetylglucosamine 2-epimerasechromosome CDS1494222 1140 - 0.416667
mraY LSA0746 Phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS740867 963 + 0.400831
mreC LSA0854 Cell shape determining lipoprotein precursorchromosome CDS842632 861 + 0.383275
mreD LSA0855 Cell shape determining proteinchromosome CDS843479 546 + 0.346154
murA1 LSA1123 UDP-N-acetylglucosamine 1-carboxyvinyltransferase Ichromosome CDS1111924 1302 - 0.433948
murA2 LSA1628 UDP-N-acetylglucosamine 1-carboxyvinyltransferase IIchromosome CDS1612355 1260 - 0.431746
murB LSA1337 UDP-N-acetylpyruvoylglucosamine reductasechromosome CDS1308829 912 - 0.425439
murC LSA0637 UDP-N-acetylmuranoyl-L-alanine synthetasechromosome CDS639369 1335 + 0.395506
murD LSA0747 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS741845 1365 + 0.424908
murE LSA0280 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligasechromosome CDS275970 1542 + 0.445525
murF LSA1616 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligasechromosome CDS1602350 1377 - 0.425563
murG LSA0748 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS743234 1092 + 0.401099
murI LSA0405 Glutamate racemasechromosome CDS414104 825 + 0.476364
nanA LSA1640 N-acetylneuraminate lyasechromosome CDS1624703 918 - 0.374728
pbp1A LSA0917 Bifunctional glycosyltransferase/transpeptidase penicillin-binding protein 1Achromosome CDS907714 2304 - 0.422309
pbp1B LSA0416 Bifunctional glycosyltransferase/transpeptidase penicillin-binding protein 1Bchromosome CDS423183 2556 - 0.406103
pbp2A LSA0621 Bifunctional glycolsyltransferase/transpeptidase penicillin binding protein 2Achromosome CDS622364 2082 + 0.434678
pbp2B1 LSA0745 Bifunctional dimerisation/transpeptidase penicillin-binding 2Bchromosome CDS738762 2073 + 0.425953
pbp2B2 LSA1334 Bifuntional dimerisation/transpeptidase penicillin-binding protein 2Bchromosome CDS1301490 2115 - 0.417021
racD LSA0099 Aspartate racemasechromosome CDS96063 717 + 0.423989
rfbB LSA1495 Putative dTDP-glucose 4,6-dehydratasechromosome CDS1467578 1005 - 0.447761
srtA1 LSA0066 Putative surface protein transpeptidase 1 precursor (Sortase 1)chromosome CDS62931 663 + 0.408748
srtA2 LSA1591 Putative surface protein transpeptidase 2 (Sortase 2)chromosome CDS1567975 597 - 0.463987
tagA LSA1571 N-acetylglucosamyldiphospho-undecaprenol-N- acetyl-beta-D-mannosaminyltransferase (Teichoic acid biosynthesis protein A)chromosome CDS1545608 729 + 0.406036
tagB LSA1576 CDP-glycerol:glycerophosphate glycerophosphotransferase (Teichoic acid biosynthesis protein B)chromosome CDS1550263 1146 - 0.379581
tagD LSA1574 Glycerol-3-phosphate cytidyltransferase (CDP-glycerol pyrophosphorylase) (Teichoic acid biosynthesis protein D)chromosome CDS1548453 387 - 0.343669
tagO LSA0490 Undecaprenyl-phosphate N-acetyl-glucosaminyl transferasechromosome CDS508094 1098 + 0.410747