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2024-05-20 03:26:59

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Chlamydophila caviae GPIC

Number of genes found: 42

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Chlamydophila caviae GPIC
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA CCA00187 tail-specific protease precursor, putativeSubName: Full=Tail-specific protease, putative; chromosome CDS200600 1956 - 0.399284
NA CCA00866 LysM domain proteinSubName: Full=LysM domain protein; chromosome CDS988296 729 - 0.400549
NA CCA01006 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1166785 1845 - 0.345799
NA CCA00087 hydrolase, carbon-nitrogen familyRecName: Full=Apolipoprotein N-acyltransferase; Short=ALP N-acyltransferase; EC=2.3.1.-; chromosome CDS101865 1626 + 0.396679
NA CCA00974 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1133670 762 + 0.389764
NA CCA00067 D-alanyl-D-alanine carboxypeptidaseSubName: Full=D-alanyl-D-alanine carboxypeptidase; chromosome CDS83161 1302 - 0.423195
NA CCA00745 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS851994 1782 - 0.382155
NA CCA00534 NLP/P60 family proteinSubName: Full=NLP/P60 family protein; chromosome CDS603515 852 - 0.420188
NA CCA00481 cationic outer membrane protein OmpH, putativeSubName: Full=Cationic outer membrane protein OmpH, putative; chromosome CDS545656 540 - 0.342593
NA CCA00673 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS769998 1347 + 0.378619
NA CCA00482 outer membrane protein, putativeSubName: Full=Outer membrane protein, putative; chromosome CDS546304 2373 - 0.380531
NA CCA00976 peptidoglycan-associated lipoproteinSubName: Full=Peptidoglycan-associated lipoprotein; chromosome CDS1135745 576 + 0.381944
NA CCA00006 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS6839 1023 + 0.387097
NA CCA00449 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS507438 516 - 0.377907
NA CCA00377 N-acetylmuramoyl-L-alanine amidase, family 3SubName: Full=N-acetylmuramoyl-L-alanine amidase, family 3; chromosome CDS427398 798 + 0.411028
NA CCA00148 LysM domain proteinSubName: Full=LysM domain protein; chromosome CDS157050 1092 + 0.407509
NA CCA00442 zinc proteaseSubName: Full=Zinc protease; chromosome CDS499884 1869 + 0.379882
NA CCA00367 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS418843 591 - 0.409475
dapA CCA00712 dihydrodipicolinate synthaseRecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; chromosome CDS819598 870 - 0.411494
glmS CCA00788 glucosamine--fructose-6-phosphate aminotransferase (isomerizing)RecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; chromosome CDS902654 1830 - 0.393443
ispH CCA00744 hydroxymethylbutenyldiphosphate reductaseRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS850955 930 - 0.395699
kdsA CCA00021 2-dehydro-3-deoxyphosphooctonate aldolaseRecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; EC=2.5.1.55; AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthase; AltName: Full=KDO-8-phosphate synthase; Short=KDO 8-P synthase; Short=KDOPS; AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase; chromosome CDS30626 810 - 0.417284
kdsB CCA00596 3-deoxy-D-manno-octulosonatecytidylyltransferaseRecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase; EC=2.7.7.38; AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid synthase; Short=CKS; Short=CMP-KDO synthase; chromosome CDS676068 765 + 0.396078
kdtA CCA00611 3-deoxy-D-manno-2-octulosonic acid transferaseSubName: Full=3-deoxy-D-manno-2-octulosonic acid transferase; chromosome CDS694839 1305 - 0.378544
lepA CCA00433 GTP-binding protein LepARecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; chromosome CDS488331 1809 - 0.383637
lgt CCA00471 prolipoprotein diacylglyceryl transferaseRecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; chromosome CDS532162 891 + 0.356902
lpxA CCA00090 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine o-acyltransferaseRecName: Full=Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Short=UDP-N-acetylglucosamine acyltransferase; EC=2.3.1.129; chromosome CDS104851 840 + 0.415476
lpxC CCA00088 UDP-3-0-acyl N-acetylglucosamine deacetylaseRecName: Full=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; EC=3.5.1.-; AltName: Full=UDP-3-O-acyl-GlcNAc deacetylase; chromosome CDS103505 858 + 0.425408
lpxD CCA00480 UDP-3-O-(R-3-hydroxymyristoyl)-glucosamineN-acyl transferaseRecName: Full=UDP-3-O-acylglucosamine N-acyltransferase; EC=2.3.1.-; chromosome CDS544549 1080 - 0.396296
lpxK CCA00216 tetraacyldisaccharide 4'-kinaseRecName: Full=Tetraacyldisaccharide 4-kinase; EC=2.7.1.130; AltName: Full=Lipid A 4-kinase; chromosome CDS231383 1104 + 0.442935
lspA CCA00210 lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS227329 498 - 0.371486
mraW CCA00372 S-adenosyl-methyltransferase MraWRecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; chromosome CDS422155 894 + 0.394855
mraY CCA00868 phospho-N-acetylmuramoyl-pentapeptide-transferaseRecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; chromosome CDS990284 1047 - 0.397326
murA CCA00171 UDP-N-acetylglucosamine1-carboxyvinyltransferaseSubName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase; chromosome CDS178511 1335 + 0.432959
murB CCA00773 UDP-N-acetylenolpyruvoylglucosamine reductaseRecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; chromosome CDS882290 891 + 0.393939
murC/ddlA CCA00863 UDP-N-acetylmuramate--alanine ligase/D-alanine--D-alanine ligaseRecName: Full=Bifunctional enzyme MurC/Ddl; Includes: RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; Includes: RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; chromosome CDS983695 2436 - 0.396141
murD CCA00867 UDP-N-acetylmuramoylalanine--D-glutamateligaseRecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; chromosome CDS989021 1260 - 0.409524
murE CCA00376 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligaseRecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13; AltName: Full=Meso-A2pm-adding enzyme; AltName: Full=Meso-diaminopimelate-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; chromosome CDS426032 1452 + 0.401515
murF CCA00869 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligaseRecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; chromosome CDS991348 1347 - 0.395694
murG CCA00864 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferaseRecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; chromosome CDS986138 1077 - 0.409471
pbp2 CCA00048 PBP2-transglycolase/transpeptidaseSubName: Full=PBP2-transglycolase/transpeptidase; chromosome CDS59801 3276 + 0.40293
pbp3 CCA00374 penicillin-binding proteinSubName: Full=Penicillin-binding protein; chromosome CDS423322 1950 + 0.39641