Gene list
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COG category: Cell wall/membrane biogenesis
Organism: Rhodoferax ferrireducens DSM 15236, DSM 15236
Number of genes found: 172
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| Rhodoferax ferrireducens DSM 15236, DSM 15236 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Rfer_1765 | NmrA-like | SubName: Full=NmrA-like; | chromosome | CDS | 1897283 | 1101 | - | 0.634877 |
| NA | Rfer_3248 | hydroxymethylbutenyl pyrophosphate reductase | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 3599943 | 963 | - | 0.617861 |
| NA | Rfer_2649 | 2-dehydro-3-deoxyphosphooctonate aldolase | RecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; EC=2.5.1.55; AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthase; AltName: Full=KDO-8-phosphate synthase; Short=KDO 8-P synthase; Short=KDOPS; AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase; | chromosome | CDS | 2914900 | 858 | + | 0.587413 |
| NA | Rfer_0658 | polysaccharide export protein | SubName: Full=Polysaccharide export protein; | chromosome | CDS | 681878 | 567 | + | 0.569665 |
| NA | Rfer_0715 | dTDP-glucose 4,6-dehydratase | RecName: Full=dTDP-glucose 4,6-dehydratase; EC=4.2.1.46; | chromosome | CDS | 756634 | 1062 | - | 0.617702 |
| NA | Rfer_0677 | O-antigen polymerase | SubName: Full=O-antigen polymerase; | chromosome | CDS | 706234 | 1311 | + | 0.537757 |
| NA | Rfer_0365 | MltA | SubName: Full=MltA; | chromosome | CDS | 366160 | 1371 | - | 0.653538 |
| NA | Rfer_3303 | N-acetylmuramoyl-L-alanine amidase | SubName: Full=N-acetylmuramoyl-L-alanine amidase; EC=3.5.1.28; Flags: Precursor; | chromosome | CDS | 3666648 | 1425 | + | 0.631579 |
| NA | Rfer_1562 | RfaE bifunctional protein, domain I | SubName: Full=D-alpha,beta-D-heptose 7-phosphate 1-kinase; EC=2.7.1.-; | chromosome | CDS | 1688216 | 951 | - | 0.61409 |
| NA | Rfer_0667 | UDP-glucose/GDP-mannose dehydrogenase | SubName: Full=UDP-glucose/GDP-mannose dehydrogenase; | chromosome | CDS | 692624 | 1281 | + | 0.552693 |
| NA | Rfer_3922 | rod shape-determining protein MreC | RecName: Full=Cell shape-determining protein MreC; AltName: Full=Cell shape protein MreC; | chromosome | CDS | 4380804 | 921 | - | 0.663409 |
| NA | Rfer_3430 | UDP-N-acetylmuramyl-tripeptide synthetases | RecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13; AltName: Full=Meso-A2pm-adding enzyme; AltName: Full=Meso-diaminopimelate-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; | chromosome | CDS | 3818229 | 1617 | - | 0.660482 |
| NA | Rfer_1088 | Lytic transglycosylase, catalytic | SubName: Full=Lytic transglycosylase, catalytic; | chromosome | CDS | 1162563 | 1962 | + | 0.633537 |
| NA | Rfer_3562 | Curli production assembly/transport component CsgG | SubName: Full=Curli production assembly/transport component CsgG; Flags: Precursor; | chromosome | CDS | 3961332 | 675 | - | 0.52 |
| NA | Rfer_1461 | Lytic transglycosylase, catalytic | SubName: Full=Lytic transglycosylase, catalytic; Flags: Precursor; | chromosome | CDS | 1571071 | 1530 | - | 0.614379 |
| NA | Rfer_1315 | Cyanophycin synthetase | SubName: Full=Cyanophycin synthetase; | chromosome | CDS | 1408237 | 2169 | - | 0.639465 |
| NA | Rfer_3819 | outer membrane chaperone Skp (OmpH) | SubName: Full=Outer membrane chaperone Skp (OmpH); Flags: Precursor; | chromosome | CDS | 4262498 | 513 | + | 0.549708 |
| NA | Rfer_2428 | large conductance mechanosensitive channel protein | RecName: Full=Large-conductance mechanosensitive channel; | chromosome | CDS | 2677476 | 429 | - | 0.529138 |
| NA | Rfer_0727 | peptidase M23B | SubName: Full=Peptidase M23B; Flags: Precursor; | chromosome | CDS | 766405 | 1398 | - | 0.600858 |
| NA | Rfer_1255 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1348669 | 1239 | + | 0.368039 |
| NA | Rfer_1275 | Lytic transglycosylase, catalytic | SubName: Full=Lytic transglycosylase, catalytic; | chromosome | CDS | 1368389 | 558 | + | 0.650538 |
| NA | Rfer_4237 | KpsF/GutQ family protein | SubName: Full=KpsF/GutQ family protein; EC=5.3.1.13; | chromosome | CDS | 4703476 | 1002 | - | 0.59481 |
| NA | Rfer_1923 | prolipoprotein diacylglyceryl transferase | RecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; | chromosome | CDS | 2065317 | 828 | + | 0.611111 |
| NA | Rfer_3735 | Twin-arginine translocation pathway signal | SubName: Full=Twin-arginine translocation pathway signal; EC=3.1.4.3; Flags: Precursor; | chromosome | CDS | 4165088 | 2184 | - | 0.599817 |
| NA | Rfer_2097 | dihydrodipicolinate synthase | RecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; | chromosome | CDS | 2271011 | 894 | - | 0.589485 |
| NA | Rfer_3425 | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase | RecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; | chromosome | CDS | 3811039 | 1167 | - | 0.663239 |
| NA | Rfer_1997 | outer membrane chaperone Skp (OmpH) | SubName: Full=Outer membrane chaperone Skp (OmpH); Flags: Precursor; | chromosome | CDS | 2154035 | 525 | + | 0.531429 |
| NA | Rfer_0483 | Lytic transglycosylase, catalytic | SubName: Full=Lytic transglycosylase, catalytic; Flags: Precursor; | chromosome | CDS | 500120 | 900 | + | 0.676667 |
| NA | Rfer_1592 | surface antigen (D15) | SubName: Full=Surface antigen (D15); Flags: Precursor; | chromosome | CDS | 1722838 | 1866 | + | 0.674169 |
| NA | Rfer_0920 | Serine-type D-Ala-D-Ala carboxypeptidase | SubName: Full=Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; Flags: Precursor; | chromosome | CDS | 966327 | 1245 | - | 0.637751 |
| NA | Rfer_0702 | Undecaprenyl-phosphategalactosephosphotransferase | SubName: Full=Undecaprenyl-phosphate galactosephosphotransferase; EC=2.7.8.6; | chromosome | CDS | 740101 | 1383 | + | 0.567607 |
| NA | Rfer_0413 | outer membrane efflux protein | SubName: Full=Outer membrane efflux protein; Flags: Precursor; | chromosome | CDS | 422676 | 1272 | - | 0.605346 |
| NA | Rfer_3177 | outer membrane lipoprotein carrier protein LolA | RecName: Full=Outer-membrane lipoprotein carrier protein; Flags: Precursor; | chromosome | CDS | 3514233 | 642 | - | 0.588785 |
| NA | Rfer_2100 | NLP/P60 | SubName: Full=NLP/P60; Flags: Precursor; | chromosome | CDS | 2274106 | 606 | - | 0.562706 |
| NA | Rfer_3431 | Peptidoglycan glycosyltransferase | SubName: Full=Peptidoglycan synthetase FtsI; EC=2.4.1.129; Flags: Precursor; | chromosome | CDS | 3819845 | 1743 | - | 0.598394 |
| NA | Rfer_3570 | beta-lactamase | SubName: Full=Beta-lactamase; Flags: Precursor; | chromosome | CDS | 3969782 | 1440 | + | 0.667361 |
| NA | Rfer_0759 | rare lipoprotein B | RecName: Full=LPS-assembly lipoprotein LptE; Flags: Precursor; | chromosome | CDS | 794128 | 492 | + | 0.605691 |
| NA | Rfer_3419 | Monofunctional biosynthetic peptidoglycan transglycosylase | SubName: Full=Monofunctional biosynthetic peptidoglycan transglycosylase; Flags: Precursor; | chromosome | CDS | 3803628 | 783 | - | 0.619413 |
| NA | Rfer_0850 | Lytic murein transglycosylase | SubName: Full=Lytic murein transglycosylase; | chromosome | CDS | 886897 | 1299 | + | 0.672055 |
| NA | Rfer_1239 | DegT/DnrJ/EryC1/StrS aminotransferase | SubName: Full=DegT/DnrJ/EryC1/StrS aminotransferase; | chromosome | CDS | 1334045 | 1107 | + | 0.547425 |
| NA | Rfer_0656 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; Flags: Precursor; | chromosome | CDS | 680042 | 1008 | + | 0.5625 |
| NA | Rfer_1572 | OmpA/MotB | SubName: Full=OmpA/MotB; Flags: Precursor; | chromosome | CDS | 1700935 | 639 | + | 0.533646 |
| NA | Rfer_0687 | glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome | CDS | 723713 | 978 | - | 0.566462 |
| NA | Rfer_2168 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 2363564 | 684 | - | 0.611111 |
| NA | Rfer_3423 | D-alanine--D-alanine ligase | RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; | chromosome | CDS | 3807928 | 1041 | - | 0.652257 |
| NA | Rfer_0277 | NmrA-like | SubName: Full=NmrA-like; | chromosome | CDS | 281882 | 891 | - | 0.654321 |
| NA | Rfer_2690 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome | CDS | 2960830 | 960 | - | 0.622917 |
| NA | Rfer_3920 | Peptidoglycan glycosyltransferase | SubName: Full=Peptidoglycan glycosyltransferase; EC=2.4.1.129; | chromosome | CDS | 4378252 | 2022 | - | 0.623145 |
| NA | Rfer_3157 | 3-deoxy-D-manno-octulosonatecytidylyltransferase | RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase; EC=2.7.7.38; AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid synthase; Short=CKS; Short=CMP-KDO synthase; | chromosome | CDS | 3493414 | 774 | + | 0.667959 |
| NA | Rfer_2780 | peptidase M23B | SubName: Full=Peptidase M23B; Flags: Precursor; | chromosome | CDS | 3067681 | 879 | - | 0.613197 |
| NA | Rfer_0672 | glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 700160 | 1215 | + | 0.590946 |
| NA | Rfer_1153 | OmpA/MotB | SubName: Full=OmpA/MotB; Flags: Precursor; | chromosome | CDS | 1238237 | 546 | - | 0.501832 |
| NA | Rfer_3801 | Serine-type D-Ala-D-Ala carboxypeptidase | SubName: Full=Penicillin-binding protein 6. Serine peptidase. MEROPS family S11; Flags: Precursor; | chromosome | CDS | 4241685 | 1185 | - | 0.58903 |
| NA | Rfer_3173 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3509725 | 663 | - | 0.627451 |
| NA | Rfer_3346 | negative regulator of AmpC, AmpD | SubName: Full=Negative regulator of AmpC, AmpD; | chromosome | CDS | 3714777 | 612 | + | 0.581699 |
| NA | Rfer_1074 | glucosamine--fructose-6-phosphate aminotransferase, isomerizing | RecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; | chromosome | CDS | 1147882 | 1884 | - | 0.619958 |
| NA | Rfer_0689 | DegT/DnrJ/EryC1/StrS aminotransferase | SubName: Full=DegT/DnrJ/EryC1/StrS aminotransferase; | chromosome | CDS | 725343 | 1110 | - | 0.52973 |
| NA | Rfer_4058 | glycosyl transferase, family 51 | SubName: Full=Glycosyl transferase, family 51; | chromosome | CDS | 4524662 | 2037 | - | 0.653412 |
| NA | Rfer_0488 | alanine racemase | RecName: Full=Alanine racemase; EC=5.1.1.1; | chromosome | CDS | 504569 | 1125 | + | 0.662222 |
| NA | Rfer_3736 | Twin-arginine translocation pathway signal | SubName: Full=Twin-arginine translocation pathway signal; EC=3.1.4.3; Flags: Precursor; | chromosome | CDS | 4167554 | 2184 | - | 0.630952 |
| NA | Rfer_1237 | GDP-mannose 4,6-dehydratase | RecName: Full=GDP-mannose 4,6-dehydratase; EC=4.2.1.47; AltName: Full=GDP-D-mannose dehydratase; | chromosome | CDS | 1331945 | 1104 | + | 0.577899 |
| NA | Rfer_2604 | Type I secretion outer membrane protein, TolC | SubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; | chromosome | CDS | 2868402 | 1329 | + | 0.629797 |
| NA | Rfer_1156 | peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 | SubName: Full=Murein-DD-endopeptidase. Serine peptidase. MEROPS family S11; Flags: Precursor; | chromosome | CDS | 1242123 | 849 | + | 0.484099 |
| NA | Rfer_2000 | acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase | RecName: Full=Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Short=UDP-N-acetylglucosamine acyltransferase; EC=2.3.1.129; | chromosome | CDS | 2156126 | 795 | + | 0.578616 |
| NA | Rfer_2679 | polysaccharide biosynthesis protein CapD | SubName: Full=Polysaccharide biosynthesis protein CapD; | chromosome | CDS | 2947642 | 1944 | + | 0.602366 |
| NA | Rfer_0453 | dihydrodipicolinate synthetase | SubName: Full=2-dehydro-3-deoxy-L-arabinonate dehydratase; EC=4.2.1.43; | chromosome | CDS | 459314 | 930 | - | 0.629032 |
| NA | Rfer_2912 | peptidase M23B | SubName: Full=Peptidase M23B; Flags: Precursor; | chromosome | CDS | 3222462 | 993 | - | 0.591138 |
| NA | Rfer_2676 | polysaccharide export protein | SubName: Full=Polysaccharide export protein; Flags: Precursor; | chromosome | CDS | 2943385 | 2550 | + | 0.588627 |
| NA | Rfer_1250 | Nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; | chromosome | CDS | 1344138 | 774 | + | 0.471576 |
| NA | Rfer_3727 | Aspartate racemase | SubName: Full=Aspartate racemase; Flags: Precursor; | chromosome | CDS | 4158484 | 732 | + | 0.60929 |
| NA | Rfer_4106 | RND efflux system, outer membrane lipoprotein, NodT | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT; Flags: Precursor; | chromosome | CDS | 4583146 | 1458 | - | 0.713992 |
| NA | Rfer_1308 | carboxyl-terminal protease | SubName: Full=Carboxyl-terminal protease; EC=3.4.21.102; Flags: Precursor; | chromosome | CDS | 1400663 | 1473 | - | 0.577733 |
| NA | Rfer_2093 | OmpA/MotB | SubName: Full=OmpA/MotB; Flags: Precursor; | chromosome | CDS | 2267778 | 534 | + | 0.565543 |
| NA | Rfer_0194 | OmpW | SubName: Full=OmpW; Flags: Precursor; | chromosome | CDS | 192375 | 684 | + | 0.587719 |
| NA | Rfer_1253 | DegT/DnrJ/EryC1/StrS aminotransferase | SubName: Full=DegT/DnrJ/EryC1/StrS aminotransferase; | chromosome | CDS | 1346461 | 1119 | + | 0.449508 |
| NA | Rfer_0098 | Organic solvent tolerance protein | RecName: Full=LPS-assembly protein LptD; Flags: Precursor; | chromosome | CDS | 100836 | 2400 | - | 0.602083 |
| NA | Rfer_0079 | AsmA | SubName: Full=AsmA; Flags: Precursor; | chromosome | CDS | 79028 | 2010 | - | 0.644279 |
| NA | Rfer_3851 | putative capsule biosynthesis protein | SubName: Full=Putative capsule biosynthesis protein; | chromosome | CDS | 4300235 | 1140 | - | 0.673684 |
| NA | Rfer_2678 | dTDP-4-dehydrorhamnose 3,5-epimerase | SubName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; EC=5.1.3.13; | chromosome | CDS | 2946962 | 552 | + | 0.581522 |
| NA | Rfer_1791 | peptidoglycan-binding LysM | SubName: Full=Peptidoglycan-binding LysM; Flags: Precursor; | chromosome | CDS | 1926798 | 2634 | - | 0.601367 |
| NA | Rfer_3428 | phospho-N-acetylmuramoyl-pentapeptide-transferase | RecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; | chromosome | CDS | 3814957 | 1179 | - | 0.592875 |
| NA | Rfer_2784 | glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome | CDS | 3071417 | 1983 | - | 0.640948 |
| NA | Rfer_2426 | MscS Mechanosensitive ion channel | SubName: Full=MscS Mechanosensitive ion channel; | chromosome | CDS | 2675605 | 816 | - | 0.589461 |
| NA | Rfer_1636 | dihydrodipicolinate synthetase | SubName: Full=Dihydrodipicolinate synthetase; | chromosome | CDS | 1767391 | 936 | - | 0.571581 |
| NA | Rfer_1264 | O-antigen polymerase | SubName: Full=O-antigen polymerase; Flags: Precursor; | chromosome | CDS | 1358008 | 1668 | - | 0.598921 |
| NA | Rfer_0673 | GDP-mannose 6-dehydrogenase | SubName: Full=GDP-mannose 6-dehydrogenase; EC=1.1.1.132; | chromosome | CDS | 701371 | 1317 | + | 0.567957 |
| NA | Rfer_1996 | surface antigen (D15) | RecName: Full=Outer membrane protein assembly factor BamA; Flags: Precursor; | chromosome | CDS | 2151696 | 2340 | + | 0.547863 |
| NA | Rfer_0085 | Nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; | chromosome | CDS | 85846 | 819 | + | 0.650794 |
| NA | Rfer_2001 | lipid-A-disaccharide synthase | RecName: Full=Lipid-A-disaccharide synthase; EC=2.4.1.182; | chromosome | CDS | 2156944 | 1170 | + | 0.595726 |
| NA | Rfer_3422 | cell division protein FtsQ | RecName: Full=Cell division protein FtsQ; Flags: Precursor; | chromosome | CDS | 3807146 | 786 | - | 0.643766 |
| NA | Rfer_1514 | RND efflux system, outer membrane lipoprotein, NodT | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT; Flags: Precursor; | chromosome | CDS | 1630281 | 1452 | + | 0.636364 |
| NA | Rfer_3427 | UDP-N-acetylmuramoylalanine--D-glutamateligase | RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; | chromosome | CDS | 3813434 | 1521 | - | 0.662064 |
| NA | Rfer_0508 | Lipopolysaccharide heptosyltransferase II | SubName: Full=Lipopolysaccharide heptosyltransferase II; | chromosome | CDS | 526589 | 954 | + | 0.637317 |
| NA | Rfer_3429 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase | RecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; | chromosome | CDS | 3816125 | 1443 | - | 0.656272 |
| NA | Rfer_1242 | 3-deoxy-manno-octulosonate cytidylyltransferase | SubName: Full=3-deoxy-manno-octulosonate cytidylyltransferase; EC=2.7.7.38; | chromosome | CDS | 1337447 | 771 | + | 0.508431 |
| NA | Rfer_2417 | Cyclopropane-fatty-acyl-phospholipid synthase | SubName: Full=Cyclopropane-fatty-acyl-phospholipid synthase; | chromosome | CDS | 2660841 | 1245 | - | 0.606426 |
| NA | Rfer_0917 | Penicillin-binding protein 1A | SubName: Full=Penicillin-binding protein 1A; EC=2.4.1.129; Flags: Precursor; | chromosome | CDS | 961083 | 2259 | - | 0.572377 |
| NA | Rfer_3921 | rod shape-determining protein MreD | SubName: Full=Rod shape-determining protein MreD; | chromosome | CDS | 4380277 | 531 | - | 0.636535 |
| NA | Rfer_0604 | LrgB-like protein | SubName: Full=LrgB-like protein; | chromosome | CDS | 629533 | 726 | - | 0.688705 |
| NA | Rfer_0451 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome | CDS | 456764 | 1056 | - | 0.641098 |
| NA | Rfer_1401 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 1512352 | 525 | - | 0.6 |
| NA | Rfer_0769 | glycosyl transferase, family 39 | SubName: Full=Glycosyl transferase, family 39; Flags: Precursor; | chromosome | CDS | 806214 | 1569 | + | 0.634799 |
| NA | Rfer_0826 | Cyclopropane-fatty-acyl-phospholipid synthase | SubName: Full=Cyclopropane-fatty-acyl-phospholipid synthase; EC=2.1.1.79; | chromosome | CDS | 862202 | 1215 | - | 0.630453 |
| NA | Rfer_0525 | phospholipase | SubName: Full=Phospholipase; Flags: Precursor; | chromosome | CDS | 548359 | 1203 | - | 0.632585 |
| NA | Rfer_0435 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome | CDS | 440514 | 891 | - | 0.581369 |
| NA | Rfer_2159 | Conserved TM helix | SubName: Full=Conserved TM helix; | chromosome | CDS | 2349236 | 693 | - | 0.590188 |
| NA | Rfer_2500 | membrane bound O-acyl transferase, MBOAT | SubName: Full=Membrane bound O-acyl transferase, MBOAT; | chromosome | CDS | 2762538 | 1473 | - | 0.629328 |
| NA | Rfer_2677 | glucose-1-phosphate thymidylyltransferase | RecName: Full=Glucose-1-phosphate thymidylyltransferase; EC=2.7.7.24; | chromosome | CDS | 2946076 | 879 | + | 0.590444 |
| NA | Rfer_1235 | NAD-dependent epimerase/dehydratase | RecName: Full=GDP-L-fucose synthase; EC=1.1.1.271; AltName: Full=GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; | chromosome | CDS | 1330447 | 963 | + | 0.602285 |
| NA | Rfer_3762 | Type I secretion outer membrane protein, TolC | SubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; | chromosome | CDS | 4197041 | 1830 | - | 0.597268 |
| NA | Rfer_2346 | Serine-type D-Ala-D-Ala carboxypeptidase | SubName: Full=Murein-DD-endopeptidase. Serine peptidase. MEROPS family S11; Flags: Precursor; | chromosome | CDS | 2579493 | 1041 | + | 0.535062 |
| NA | Rfer_0668 | glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 693905 | 1179 | + | 0.628499 |
| NA | Rfer_1614 | glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 1746585 | 993 | - | 0.647533 |
| NA | Rfer_0771 | glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; Flags: Precursor; | chromosome | CDS | 808088 | 1020 | - | 0.60098 |
| NA | Rfer_1256 | glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome | CDS | 1350323 | 876 | + | 0.341324 |
| NA | Rfer_2998 | Lipopolysaccharide heptosyltransferase I | SubName: Full=Lipopolysaccharide heptosyltransferase I; | chromosome | CDS | 3305098 | 1062 | - | 0.661017 |
| NA | Rfer_2938 | VacJ-like lipoprotein | SubName: Full=VacJ-like lipoprotein; Flags: Precursor; | chromosome | CDS | 3252070 | 834 | + | 0.592326 |
| NA | Rfer_0711 | Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | SubName: Full=Mannose-1-phosphate guanylyltransferase (GDP); EC=2.7.7.22; | chromosome | CDS | 751893 | 1488 | - | 0.627688 |
| NA | Rfer_1998 | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase | RecName: Full=UDP-3-O-acylglucosamine N-acyltransferase; EC=2.3.1.-; | chromosome | CDS | 2154582 | 990 | + | 0.584848 |
| NA | Rfer_3184 | RND efflux system, outer membrane lipoprotein, NodT | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT; Flags: Precursor; | chromosome | CDS | 3521847 | 1428 | + | 0.654762 |
| NA | Rfer_2545 | Lytic murein transglycosylase B | SubName: Full=Lytic murein transglycosylase B; | chromosome | CDS | 2805990 | 1071 | + | 0.64239 |
| NA | Rfer_2527 | MscS Mechanosensitive ion channel | SubName: Full=MscS Mechanosensitive ion channel; | chromosome | CDS | 2785956 | 1284 | - | 0.622274 |
| NA | Rfer_2307 | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase | RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; EC=1.17.7.1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; | chromosome | CDS | 2530393 | 1275 | - | 0.552157 |
| NA | Rfer_3433 | methyltransferase | RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; | chromosome | CDS | 3821925 | 930 | - | 0.61828 |
| NA | Rfer_1882 | OmpA/MotB | SubName: Full=OmpA/MotB; Flags: Precursor; | chromosome | CDS | 2018400 | 1164 | + | 0.575601 |
| NA | Rfer_0714 | dTDP-4-dehydrorhamnose reductase | SubName: Full=dTDP-4-dehydrorhamnose reductase; EC=1.1.1.133; | chromosome | CDS | 755627 | 903 | - | 0.681063 |
| NA | Rfer_1260 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome | CDS | 1354551 | 1149 | + | 0.550914 |
| NA | Rfer_0713 | UDP-glucose 4-epimerase | SubName: Full=UDP-galactose 4-epimerase; EC=5.1.3.2; | chromosome | CDS | 754572 | 1020 | - | 0.647059 |
| NA | Rfer_3997 | glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome | CDS | 4459868 | 789 | - | 0.61597 |
| NA | Rfer_1314 | Cyanophycin synthetase | SubName: Full=Cyanophycin synthetase; | chromosome | CDS | 1405656 | 2577 | - | 0.638339 |
| NA | Rfer_0319 | OmpW | SubName: Full=OmpW; Flags: Precursor; | chromosome | CDS | 318065 | 702 | - | 0.574074 |
| NA | Rfer_0050 | methyltransferase GidB | RecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.170; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; | chromosome | CDS | 53728 | 675 | + | 0.628148 |
| NA | Rfer_1561 | ADP-L-glycero-D-manno-heptose-6-epimerase | RecName: Full=ADP-L-glycero-D-manno-heptose-6-epimerase; EC=5.1.3.20; AltName: Full=ADP-L-glycero-beta-D-manno-heptose-6-epimerase; Short=ADP-glyceromanno-heptose 6-epimerase; Short=ADP-hep 6-epimerase; Short=AGME; | chromosome | CDS | 1687197 | 1023 | - | 0.57478 |
| NA | Rfer_2944 | UDP-N-acetylglucosamine1-carboxyvinyltransferase | RecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase; Short=EPT; | chromosome | CDS | 3255905 | 1266 | + | 0.617694 |
| NA | Rfer_1995 | Peptidase M50, putative membrane-associated zinc metallopeptidase | SubName: Full=RseP peptidase. Metallo peptidase. MEROPS family M50B; Flags: Precursor; | chromosome | CDS | 2150342 | 1362 | + | 0.600587 |
| NA | Rfer_2064 | RND efflux system, outer membrane lipoprotein, NodT | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT; Flags: Precursor; | chromosome | CDS | 2234832 | 1500 | - | 0.671333 |
| NA | Rfer_0327 | Lytic murein transglycosylase | SubName: Full=Lytic murein transglycosylase; | chromosome | CDS | 326141 | 1305 | - | 0.669732 |
| NA | Rfer_1251 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome | CDS | 1344920 | 1104 | + | 0.501812 |
| NA | Rfer_1259 | glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 1353266 | 1116 | + | 0.564516 |
| NA | Rfer_3412 | TonB-like | SubName: Full=TonB-like; Flags: Precursor; | chromosome | CDS | 3796878 | 858 | + | 0.656177 |
| NA | Rfer_4052 | RfaE bifunctional protein, domain II | SubName: Full=RfaE bifunctional protein, domain II; | chromosome | CDS | 4516782 | 513 | + | 0.666667 |
| NA | Rfer_3414 | UDP-3-0-acyl N-acetylglucosamine deacetylase | RecName: Full=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; EC=3.5.1.-; AltName: Full=UDP-3-O-acyl-GlcNAc deacetylase; | chromosome | CDS | 3798640 | 924 | + | 0.626623 |
| NA | Rfer_3356 | UDP-N-acetylmuramate | SubName: Full=UDP-N-acetylmuramate; Flags: Precursor; | chromosome | CDS | 3725928 | 1401 | + | 0.613847 |
| NA | Rfer_1083 | UDP-N-acetylglucosamine pyrophosphorylase | RecName: Full=Bifunctional protein GlmU; Includes: RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.7.7.23; AltName: Full=N-acetylglucosamine-1-phosphate uridyltransferase; Includes: RecName: Full=Glucosamine-1-phosphate N-acetyltransferase; EC=2.3.1.157; | chromosome | CDS | 1157165 | 1446 | - | 0.630705 |
| NA | Rfer_2597 | Glutamate racemase | RecName: Full=Glutamate racemase; EC=5.1.1.3; | chromosome | CDS | 2860702 | 816 | + | 0.628676 |
| NA | Rfer_0191 | D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase | SubName: Full=D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13; Flags: Precursor; | chromosome | CDS | 188463 | 1500 | + | 0.678667 |
| NA | Rfer_2918 | Penicillin-binding protein 1A | SubName: Full=Penicillin-binding protein 1A; EC=2.4.1.129; | chromosome | CDS | 3227411 | 2394 | - | 0.566416 |
| NA | Rfer_2091 | glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome | CDS | 2265513 | 783 | - | 0.491699 |
| NA | Rfer_2189 | beta-lactamase | SubName: Full=Beta-lactamase; | chromosome | CDS | 2387936 | 1209 | - | 0.611249 |
| NA | Rfer_0670 | glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 697011 | 1218 | + | 0.610837 |
| NA | Rfer_0741 | NLP/P60 | SubName: Full=NLP/P60; Flags: Precursor; | chromosome | CDS | 779356 | 504 | + | 0.585317 |
| NA | Rfer_2657 | Lytic transglycosylase, catalytic | SubName: Full=Lytic transglycosylase, catalytic; | chromosome | CDS | 2924375 | 804 | + | 0.574627 |
| NA | Rfer_1026 | dihydrodipicolinate synthetase | SubName: Full=2-dehydro-3-deoxy-L-arabinonate dehydratase; EC=4.2.1.43; | chromosome | CDS | 1085585 | 930 | - | 0.632258 |
| NA | Rfer_3424 | UDP-N-acetylmuramate--alanine ligase | RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; | chromosome | CDS | 3808965 | 1434 | - | 0.642259 |
| NA | Rfer_2152 | MscS Mechanosensitive ion channel | SubName: Full=MscS Mechanosensitive ion channel; | chromosome | CDS | 2335674 | 1134 | + | 0.567019 |
| NA | Rfer_2691 | UDP-N-acetylenolpyruvoylglucosamine reductase | RecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; | chromosome | CDS | 2961843 | 1107 | - | 0.633243 |
| NA | Rfer_1623 | glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome | CDS | 1755675 | 675 | + | 0.586667 |
| NA | Rfer_0663 | UDP-N-acetylglucosamine 2-epimerase | SubName: Full=UDP-N-acetylglucosamine 2-epimerase; EC=5.1.3.14; | chromosome | CDS | 687744 | 1197 | + | 0.598997 |
| NA | Rfer_0675 | glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 703735 | 1131 | + | 0.569408 |
| NA | Rfer_0712 | Nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; | chromosome | CDS | 753416 | 1131 | - | 0.599469 |
| NA | Rfer_0686 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 722584 | 1116 | - | 0.585125 |
| NA | Rfer_3108 | Aspartate racemase | SubName: Full=Aspartate racemase; | chromosome | CDS | 3447747 | 780 | + | 0.625641 |
| NA | Rfer_1854 | Substrate-binding region of ABC-type glycine betaine transport system | SubName: Full=Substrate-binding region of ABC-type glycine betaine transport system; Flags: Precursor; | chromosome | CDS | 1995526 | 927 | + | 0.601942 |
| NA | Rfer_2992 | glycosyl transferase, family 51 | SubName: Full=Glycosyl transferase, family 51; Flags: Precursor; | chromosome | CDS | 3297274 | 3045 | + | 0.632184 |
| NA | Rfer_3298 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome | CDS | 3661846 | 918 | - | 0.643791 |
| NA | Rfer_2963 | large conductance mechanosensitive channel protein | RecName: Full=Large-conductance mechanosensitive channel; | chromosome | CDS | 3270266 | 429 | - | 0.561772 |
| NA | Rfer_3765 | Lytic transglycosylase, catalytic | SubName: Full=Lytic transglycosylase, catalytic; Flags: Precursor; | chromosome | CDS | 4201613 | 981 | + | 0.671763 |
| NA | Rfer_0206 | OmpA/MotB | SubName: Full=OmpA/MotB; Flags: Precursor; | chromosome | CDS | 205013 | 654 | - | 0.626911 |
| NA | Rfer_3697 | apolipoprotein N-acyltransferase | RecName: Full=Apolipoprotein N-acyltransferase; Short=ALP N-acyltransferase; EC=2.3.1.-; | chromosome | CDS | 4130083 | 1725 | - | 0.652174 |
| NA | Rfer_1263 | sugar transferase | SubName: Full=Sugar transferase; Flags: Precursor; | chromosome | CDS | 1357372 | 561 | + | 0.57041 |
| NA | Rfer_2085 | glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 2259845 | 1206 | + | 0.556385 |
| NA | Rfer_2997 | Three-deoxy-D-manno-octulosonic-acidtransferase-like | SubName: Full=Three-deoxy-D-manno-octulosonic-acid transferase-like; | chromosome | CDS | 3303740 | 1362 | - | 0.657122 |
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