Gene list
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COG category: Cell wall/membrane biogenesis
Organism: Rhodopseudomonas palustris HaA2, HaA2
Number of genes found: 217
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Rhodopseudomonas palustris HaA2, HaA2 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | RPB_2240 | RND efflux system, outer membrane lipoprotein, NodT | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT; | chromosome | CDS | 2566836 | 1557 | + | 0.67052 |
NA | RPB_2894 | Type I secretion outer membrane protein, TolC | SubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; | chromosome | CDS | 3295455 | 1383 | - | 0.655098 |
NA | RPB_2676 | rare lipoprotein A | SubName: Full=Rare lipoprotein A; | chromosome | CDS | 3057767 | 945 | + | 0.671958 |
NA | RPB_2819 | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase | RecName: Full=UDP-3-O-acylglucosamine N-acyltransferase; EC=2.3.1.-; | chromosome | CDS | 3211715 | 1080 | - | 0.644444 |
NA | RPB_0051 | Peptidase U6, penicillin-insensitive murein endopeptidase | SubName: Full=Peptidase U6, penicillin-insensitive murein endopeptidase; Flags: Precursor; | chromosome | CDS | 54035 | 957 | + | 0.703239 |
NA | RPB_3382 | diacylglycerol kinase | SubName: Full=Diacylglycerol kinase; EC=2.7.1.107; | chromosome | CDS | 3866713 | 354 | - | 0.666667 |
NA | RPB_2145 | outer membrane protein | SubName: Full=Outer membrane protein; Flags: Precursor; | chromosome | CDS | 2434591 | 825 | + | 0.632727 |
NA | RPB_2736 | Peptidase M23B | SubName: Full=Peptidase M23B; Flags: Precursor; | chromosome | CDS | 3120772 | 1425 | - | 0.717193 |
NA | RPB_3958 | Dihydrodipicolinate synthetase | SubName: Full=Dihydrodipicolinate synthetase; | chromosome | CDS | 4518274 | 876 | - | 0.66895 |
NA | RPB_1856 | tetraacyldisaccharide 4'-kinase | RecName: Full=Tetraacyldisaccharide 4-kinase; EC=2.7.1.130; AltName: Full=Lipid A 4-kinase; | chromosome | CDS | 2121497 | 1017 | + | 0.704031 |
NA | RPB_3644 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4180417 | 381 | - | 0.653543 |
NA | RPB_2199 | putative outer membrane protein | SubName: Full=Putative outer membrane protein; Flags: Precursor; | chromosome | CDS | 2492147 | 714 | + | 0.673669 |
NA | RPB_1565 | glucose-1-phosphate thymidylyltransferase | RecName: Full=Glucose-1-phosphate thymidylyltransferase; EC=2.7.7.24; | chromosome | CDS | 1763766 | 879 | + | 0.645051 |
NA | RPB_0567 | OmpA-like transmembrane domain | SubName: Full=OmpA-like transmembrane domain; Flags: Precursor; | chromosome | CDS | 639289 | 1986 | - | 0.675227 |
NA | RPB_1011 | glycosyl transferase, WecB/TagA/CpsF family | SubName: Full=Glycosyl transferase, WecB/TagA/CpsF family; | chromosome | CDS | 1159529 | 912 | - | 0.685307 |
NA | RPB_0890 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 1020195 | 921 | - | 0.693811 |
NA | RPB_4181 | lipoprotein signal peptidase | RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; | chromosome | CDS | 4753652 | 498 | - | 0.636546 |
NA | RPB_3007 | Penicillin-binding protein 1A | SubName: Full=Penicillin-binding protein 1A; EC=2.4.1.129; Flags: Precursor; | chromosome | CDS | 3425035 | 2493 | - | 0.663057 |
NA | RPB_1525 | GDP-mannose 4,6-dehydratase | RecName: Full=GDP-mannose 4,6-dehydratase; EC=4.2.1.47; AltName: Full=GDP-D-mannose dehydratase; | chromosome | CDS | 1718054 | 1083 | + | 0.585411 |
NA | RPB_4101 | Glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome | CDS | 4669760 | 1173 | - | 0.671782 |
NA | RPB_3558 | Type I secretion outer membrane protein, TolC | SubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; | chromosome | CDS | 4071544 | 1419 | + | 0.6716 |
NA | RPB_4295 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 4881600 | 1107 | - | 0.701897 |
NA | RPB_2903 | RND efflux system, outer membrane lipoprotein, NodT | SubName: Full=RND efflux system, outer membrane lipoprotein, NodT; | chromosome | CDS | 3309023 | 1449 | - | 0.673568 |
NA | RPB_4027 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 4596683 | 1200 | - | 0.6825 |
NA | RPB_1640 | Type I secretion membrane fusion protein, HlyD | SubName: Full=Type I secretion membrane fusion protein, HlyD; | chromosome | CDS | 1869479 | 1338 | + | 0.599402 |
NA | RPB_3839 | Glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 4384806 | 1335 | - | 0.68764 |
NA | RPB_2426 | Peptidase M15D, vanX D-ala-D-ala dipeptidase | SubName: Full=Peptidase M15D, vanX D-ala-D-ala dipeptidase; Flags: Precursor; | chromosome | CDS | 2783161 | 753 | + | 0.669323 |
NA | RPB_0618 | Peptidoglycan-binding domain 1 | SubName: Full=Peptidoglycan-binding domain 1; Flags: Precursor; | chromosome | CDS | 696546 | 1383 | + | 0.689082 |
NA | RPB_3608 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 4140591 | 1203 | - | 0.679136 |
NA | RPB_0469 | Small GTP-binding protein domain | RecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; | chromosome | CDS | 516521 | 1935 | + | 0.636176 |
NA | RPB_2478 | Organic solvent tolerance protein | RecName: Full=LPS-assembly protein LptD; Flags: Precursor; | chromosome | CDS | 2834360 | 2502 | - | 0.621503 |
NA | RPB_1992 | UDP-N-acetylmuramoylalanine--D-glutamateligase | RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; | chromosome | CDS | 2263174 | 1401 | + | 0.691649 |
NA | RPB_2781 | Glycosyl transferase, family 2 | RecName: Full=Glucans biosynthesis glucosyltransferase H; EC=2.4.1.-; | chromosome | CDS | 3169108 | 2163 | + | 0.6773 |
NA | RPB_1147 | Aspartate racemase | SubName: Full=Aspartate racemase; EC=5.1.1.13; | chromosome | CDS | 1319719 | 726 | + | 0.655647 |
NA | RPB_0565 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 635826 | 987 | - | 0.697062 |
NA | RPB_4521 | Lytic murein transglycosylase | SubName: Full=Lytic murein transglycosylase; Flags: Precursor; | chromosome | CDS | 5108270 | 1395 | + | 0.678136 |
NA | RPB_0288 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 326291 | 618 | + | 0.686084 |
NA | RPB_1102 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 1265108 | 1413 | + | 0.661713 |
NA | RPB_1609 | DegT/DnrJ/EryC1/StrS aminotransferase | SubName: Full=DegT/DnrJ/EryC1/StrS aminotransferase; | chromosome | CDS | 1813288 | 1152 | + | 0.662326 |
NA | RPB_1345 | Serine-type D-Ala-D-Ala carboxypeptidase | SubName: Full=Serine-type D-Ala-D-Ala carboxypeptidase; EC=3.4.16.4; Flags: Precursor; | chromosome | CDS | 1531960 | 1500 | - | 0.678 |
NA | RPB_0751 | surface antigen | RecName: Full=Outer membrane protein assembly factor BamA; Flags: Precursor; | chromosome | CDS | 840299 | 2523 | + | 0.62505 |
NA | RPB_1633 | Type I secretion outer membrane protein, TolC | SubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; | chromosome | CDS | 1839424 | 1560 | + | 0.623077 |
NA | RPB_1563 | dTDP-4-dehydrorhamnose 3,5-epimerase | SubName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; EC=5.1.3.13; | chromosome | CDS | 1762295 | 558 | + | 0.639785 |
NA | RPB_2906 | Cyclopropane-fatty-acyl-phospholipid synthase | SubName: Full=Cyclopropane-fatty-acyl-phospholipid synthase; EC=2.1.1.79; | chromosome | CDS | 3313121 | 1230 | + | 0.645528 |
NA | RPB_4203 | Lytic murein transglycosylase | SubName: Full=Lytic murein transglycosylase; Flags: Precursor; | chromosome | CDS | 4774711 | 1377 | + | 0.678286 |
NA | RPB_2821 | Peptidase M50, putative membrane-associated zinc metallopeptidase | SubName: Full=RseP peptidase. Metallo peptidase. MEROPS family M50B; | chromosome | CDS | 3215528 | 1152 | - | 0.618056 |
NA | RPB_1924 | Lytic murein transglycosylase | SubName: Full=Lytic murein transglycosylase; Flags: Precursor; | chromosome | CDS | 2196537 | 1236 | + | 0.680421 |
NA | RPB_2229 | Lytic transglycosylase, catalytic | SubName: Full=Lytic transglycosylase, catalytic; Flags: Precursor; | chromosome | CDS | 2541986 | 792 | + | 0.671717 |
NA | RPB_2714 | outer membrane protein | SubName: Full=Outer membrane protein; Flags: Precursor; | chromosome | CDS | 3098506 | 732 | + | 0.653005 |
NA | RPB_0321 | OmpA/MotB | SubName: Full=OmpA/MotB; Flags: Precursor; | chromosome | CDS | 365653 | 1956 | - | 0.751023 |
NA | RPB_2568 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; | chromosome | CDS | 2950177 | 1239 | - | 0.673123 |
NA | RPB_1601 | Lipopolysaccharide heptosyltransferase II | SubName: Full=Lipopolysaccharide heptosyltransferase II; | chromosome | CDS | 1804001 | 1077 | - | 0.687094 |
NA | RPB_2598 | Lipoprotein releasing system, transmembrane protein, LolC/E family | SubName: Full=Lipoprotein releasing system, transmembrane protein, LolC/E family; | chromosome | CDS | 2980197 | 1281 | + | 0.641686 |
NA | RPB_2238 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 2562396 | 1296 | + | 0.658951 |
NA | RPB_4485 | Cyclopropane-fatty-acyl-phospholipid synthase | SubName: Full=Cyclopropane-fatty-acyl-phospholipid synthase; | chromosome | CDS | 5072369 | 1026 | - | 0.653021 |
NA | RPB_2660 | Glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 3041701 | 1170 | - | 0.689744 |
NA | RPB_3590 | OmpA/MotB | SubName: Full=OmpA/MotB; Flags: Precursor; | chromosome | CDS | 4114920 | 1356 | - | 0.708702 |
NA | RPB_3008 | N-acetylmuramoyl-L-alanine amidase | SubName: Full=N-acetylmuramoyl-L-alanine amidase; EC=3.5.1.28; Flags: Precursor; | chromosome | CDS | 3427721 | 1311 | - | 0.652937 |
NA | RPB_4164 | prolipoprotein diacylglyceryl transferase | RecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; | chromosome | CDS | 4735603 | 864 | + | 0.662037 |
NA | RPB_1082 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 1241525 | 1509 | + | 0.713055 |
NA | RPB_2399 | Lytic transglycosylase, catalytic | SubName: Full=Lytic transglycosylase, catalytic; Flags: Precursor; | chromosome | CDS | 2754378 | 993 | + | 0.69285 |
NA | RPB_1551 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome | CDS | 1748465 | 909 | + | 0.674367 |
NA | RPB_0258 | carboxyl-terminal protease | SubName: Full=C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A; Flags: Precursor; | chromosome | CDS | 290963 | 1374 | + | 0.650655 |
NA | RPB_1502 | alanine racemase | RecName: Full=Alanine racemase; EC=5.1.1.1; | chromosome | CDS | 1696860 | 1167 | + | 0.66838 |
NA | RPB_1657 | TonB-like protein | SubName: Full=TonB-like protein; | chromosome | CDS | 1886570 | 840 | + | 0.709524 |
NA | RPB_2915 | Glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome | CDS | 3323145 | 759 | - | 0.683794 |
NA | RPB_2958 | Lytic murein transglycosylase | SubName: Full=Lytic murein transglycosylase; Flags: Precursor; | chromosome | CDS | 3367955 | 1227 | + | 0.691932 |
NA | RPB_1776 | NLP/P60 | SubName: Full=NLP/P60; | chromosome | CDS | 2037082 | 885 | - | 0.693785 |
NA | RPB_1550 | Glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 1747269 | 1140 | + | 0.640351 |
NA | RPB_2957 | Peptidase M23B | SubName: Full=Peptidase M23B; Flags: Precursor; | chromosome | CDS | 3366242 | 1623 | + | 0.700555 |
NA | RPB_2603 | large conductance mechanosensitive channel protein | RecName: Full=Large-conductance mechanosensitive channel; | chromosome | CDS | 2988060 | 432 | + | 0.648148 |
NA | RPB_1605 | Glycosyl transferase, family 4 | SubName: Full=Glycosyl transferase, family 4; Flags: Precursor; | chromosome | CDS | 1809716 | 1020 | - | 0.646078 |
NA | RPB_1855 | Three-deoxy-D-manno-octulosonic-acidtransferase-like | SubName: Full=Three-deoxy-D-manno-octulosonic-acid transferase-like; | chromosome | CDS | 2120158 | 1347 | + | 0.700817 |
NA | RPB_0772 | OmpA/MotB | SubName: Full=OmpA/MotB; Flags: Precursor; | chromosome | CDS | 865318 | 1395 | + | 0.69319 |
NA | RPB_2678 | Serine-type D-Ala-D-Ala carboxypeptidase | SubName: Full=Serine-type D-Ala-D-Ala carboxypeptidase; EC=3.4.16.4; Flags: Precursor; | chromosome | CDS | 3059834 | 1260 | + | 0.653175 |
NA | RPB_0163 | NmrA-like protein | SubName: Full=NmrA-like protein; | chromosome | CDS | 175990 | 672 | - | 0.715774 |
NA | RPB_1729 | hydroxymethylbutenyl pyrophosphate reductase | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 1971758 | 945 | - | 0.647619 |
NA | RPB_3452 | LipA a lipoprotein | SubName: Full=LipA a lipoprotein; | chromosome | CDS | 3958897 | 507 | - | 0.719921 |
NA | RPB_0801 | Type I secretion membrane fusion protein, HlyD | SubName: Full=Type I secretion membrane fusion protein, HlyD; | chromosome | CDS | 898198 | 1323 | - | 0.681784 |
NA | RPB_0269 | rare lipoprotein A | SubName: Full=Rare lipoprotein A; Flags: Precursor; | chromosome | CDS | 303167 | 483 | + | 0.668737 |
NA | RPB_2854 | glucosamine--fructose-6-phosphate aminotransferase, isomerizing | RecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; | chromosome | CDS | 3252407 | 1827 | - | 0.654625 |
NA | RPB_3003 | Peptidase M23B | SubName: Full=Peptidase M23B; | chromosome | CDS | 3420507 | 1374 | + | 0.694323 |
NA | RPB_1564 | dTDP-4-dehydrorhamnose reductase | SubName: Full=dTDP-4-dehydrorhamnose reductase; EC=1.1.1.133; | chromosome | CDS | 1762856 | 897 | + | 0.720178 |
NA | RPB_0892 | AsmA | SubName: Full=AsmA; Flags: Precursor; | chromosome | CDS | 1023804 | 1968 | - | 0.708333 |
NA | RPB_2223 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2536606 | 744 | + | 0.677419 |
NA | RPB_3497 | Choloylglycine hydrolase | SubName: Full=Penicillin V acylase. Cysteine peptidase. MEROPS family C59; EC=3.5.1.11; Flags: Precursor; | chromosome | CDS | 4002275 | 1068 | + | 0.652622 |
NA | RPB_1536 | Acylneuraminate cytidylyltransferase | SubName: Full=Acylneuraminate cytidylyltransferase; EC=2.7.7.43; | chromosome | CDS | 1730181 | 696 | + | 0.663793 |
NA | RPB_1033 | Glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 1185888 | 1068 | - | 0.650749 |
NA | RPB_1543 | Glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome | CDS | 1739152 | 744 | + | 0.58871 |
NA | RPB_1552 | NAD-dependent epimerase/dehydratase | RecName: Full=GDP-mannose 4,6-dehydratase; EC=4.2.1.47; AltName: Full=GDP-D-mannose dehydratase; | chromosome | CDS | 1749350 | 975 | - | 0.620513 |
NA | RPB_1844 | Glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; Flags: Precursor; | chromosome | CDS | 2110159 | 1044 | - | 0.681035 |
NA | RPB_0171 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; | chromosome | CDS | 185450 | 1071 | - | 0.688142 |
NA | RPB_1815 | OmpA/MotB | SubName: Full=OmpA/MotB; Flags: Precursor; | chromosome | CDS | 2076745 | 498 | + | 0.658635 |
NA | RPB_3804 | Nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; | chromosome | CDS | 4341566 | 918 | - | 0.654684 |
NA | RPB_1457 | AsmA | SubName: Full=AsmA; Flags: Precursor; | chromosome | CDS | 1645826 | 1965 | - | 0.692112 |
NA | RPB_4245 | Peptidase M23B | SubName: Full=Peptidase M23B; | chromosome | CDS | 4826867 | 2043 | + | 0.679883 |
NA | RPB_0515 | Monofunctional biosynthetic peptidoglycan transglycosylase | RecName: Full=Monofunctional biosynthetic peptidoglycan transglycosylase; Short=Monofunctional TGase; EC=2.4.2.-; | chromosome | CDS | 575982 | 684 | - | 0.695906 |
NA | RPB_1243 | TonB-like protein | SubName: Full=TonB-like protein; | chromosome | CDS | 1421753 | 879 | + | 0.739477 |
NA | RPB_1340 | hydroxymethylbutenyl pyrophosphate reductase | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 1526621 | 966 | + | 0.675983 |
NA | RPB_1998 | UDP-N-acetylenolpyruvoylglucosamine reductase | RecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; | chromosome | CDS | 2269969 | 930 | + | 0.698925 |
NA | RPB_0886 | glycosyl transferases | SubName: Full=Glycosyl transferases; | chromosome | CDS | 1013469 | 2022 | - | 0.708704 |
NA | RPB_2855 | Nucleotidyl transferase | RecName: Full=Bifunctional protein GlmU; Includes: RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.7.7.23; AltName: Full=N-acetylglucosamine-1-phosphate uridyltransferase; Includes: RecName: Full=Glucosamine-1-phosphate N-acetyltransferase; EC=2.3.1.157; | chromosome | CDS | 3254379 | 1359 | - | 0.667403 |
NA | RPB_0660 | dehydrogenase | SubName: Full=Dehydrogenase; | chromosome | CDS | 744542 | 966 | + | 0.682195 |
NA | RPB_0311 | Membrane bound O-acyl transferase, MBOAT | SubName: Full=Membrane bound O-acyl transferase, MBOAT; | chromosome | CDS | 352393 | 1473 | - | 0.646979 |
NA | RPB_1604 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome | CDS | 1807772 | 1956 | + | 0.620143 |
NA | RPB_4708 | Polysaccharide export protein | SubName: Full=Polysaccharide export protein; | chromosome | CDS | 5328176 | 660 | - | 0.690909 |
NA | RPB_3840 | Glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome | CDS | 4386405 | 1044 | + | 0.705939 |
NA | RPB_3304 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 3778449 | 1191 | - | 0.698573 |
NA | RPB_3514 | Peptidoglycan-binding domain 1 | SubName: Full=Peptidoglycan-binding domain 1; | chromosome | CDS | 4022130 | 804 | - | 0.735075 |
NA | RPB_2243 | Type I secretion membrane fusion protein, HlyD | SubName: Full=Type I secretion membrane fusion protein, HlyD; Flags: Precursor; | chromosome | CDS | 2572670 | 1335 | + | 0.64794 |
NA | RPB_3795 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4330897 | 342 | + | 0.646199 |
NA | RPB_1768 | 3-deoxy-D-manno-octulosonatecytidylyltransferase | RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase; EC=2.7.7.38; AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid synthase; Short=CKS; Short=CMP-KDO synthase; | chromosome | CDS | 2026750 | 780 | - | 0.7 |
NA | RPB_1597 | UDP-glucose 4-epimerase | SubName: Full=UDP-galactose 4-epimerase; EC=5.1.3.2; | chromosome | CDS | 1800656 | 1014 | - | 0.658777 |
NA | RPB_1309 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1491948 | 801 | + | 0.64794 |
NA | RPB_0594 | apolipoprotein N-acyltransferase | RecName: Full=Apolipoprotein N-acyltransferase; Short=ALP N-acyltransferase; EC=2.3.1.-; Flags: Precursor; | chromosome | CDS | 666514 | 1611 | + | 0.657356 |
NA | RPB_3883 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; | chromosome | CDS | 4437635 | 1275 | - | 0.703529 |
NA | RPB_4061 | Mandelate racemase/muconate lactonizing enzyme | SubName: Full=Mandelate racemase/muconate lactonizing enzyme; | chromosome | CDS | 4632059 | 1128 | + | 0.695922 |
NA | RPB_1622 | Glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 1827408 | 1059 | + | 0.707271 |
NA | RPB_1986 | methyltransferase | RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; | chromosome | CDS | 2255736 | 1014 | + | 0.713018 |
NA | RPB_3882 | Protein of unknown function DUF214 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4436412 | 1227 | - | 0.682967 |
NA | RPB_2241 | Type I secretion outer membrane protein, TolC | SubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; | chromosome | CDS | 2568705 | 1575 | + | 0.645079 |
NA | RPB_0378 | Outer membrane lipoprotein carrier protein LolA | SubName: Full=Outer membrane lipoprotein carrier protein LolA; | chromosome | CDS | 419473 | 954 | + | 0.665618 |
NA | RPB_3838 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4383488 | 1311 | - | 0.682685 |
NA | RPB_3650 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; | chromosome | CDS | 4189890 | 1194 | - | 0.668342 |
NA | RPB_2457 | alanine racemase | RecName: Full=Alanine racemase; EC=5.1.1.1; | chromosome | CDS | 2813220 | 1272 | - | 0.691824 |
NA | RPB_1553 | UDP-glucose/GDP-mannose dehydrogenase | SubName: Full=UDP-glucose/GDP-mannose dehydrogenase; | chromosome | CDS | 1750581 | 1272 | + | 0.60456 |
NA | RPB_1996 | UDP-N-acetylmuramate--alanine ligase | RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; | chromosome | CDS | 2268066 | 1407 | + | 0.663113 |
NA | RPB_1537 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1730876 | 1713 | + | 0.637478 |
NA | RPB_3459 | Putative phage cell wall peptidase, NlpC/P60 | SubName: Full=Putative phage cell wall peptidase, NlpC/P60; | chromosome | CDS | 3969295 | 444 | - | 0.707207 |
NA | RPB_3810 | dTDP-glucose 4,6-dehydratase | SubName: Full=dTDP-glucose 4,6-dehydratase; | chromosome | CDS | 4347875 | 1038 | - | 0.659923 |
NA | RPB_1012 | UDP-glucose 4-epimerase | SubName: Full=UDP-galactose 4-epimerase; EC=5.1.3.2; | chromosome | CDS | 1160679 | 984 | - | 0.680894 |
NA | RPB_4525 | Dihydrodipicolinate synthetase | RecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; | chromosome | CDS | 5113782 | 912 | + | 0.689693 |
NA | RPB_4194 | MscS Mechanosensitive ion channel | SubName: Full=MscS Mechanosensitive ion channel; Flags: Precursor; | chromosome | CDS | 4766136 | 1689 | - | 0.670811 |
NA | RPB_2602 | dihydrodipicolinate synthase | RecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; | chromosome | CDS | 2987118 | 891 | + | 0.657688 |
NA | RPB_1988 | Peptidoglycan glycosyltransferase | SubName: Full=Peptidoglycan glycosyltransferase; EC=2.4.1.129; | chromosome | CDS | 2257126 | 1755 | + | 0.659829 |
NA | RPB_0896 | OmpA/MotB | SubName: Full=OmpA/MotB; Flags: Precursor; | chromosome | CDS | 1031508 | 639 | - | 0.668232 |
NA | RPB_3657 | glycosyl transferase, family 39 | SubName: Full=Glycosyl transferase, family 39; Flags: Precursor; | chromosome | CDS | 4197974 | 1491 | - | 0.681422 |
NA | RPB_3035 | Lytic transglycosylase, catalytic | SubName: Full=Lytic transglycosylase, catalytic; Flags: Precursor; | chromosome | CDS | 3457737 | 2244 | + | 0.681818 |
NA | RPB_2661 | Lipopolysaccharide biosynthesis | SubName: Full=Lipopolysaccharide biosynthesis; | chromosome | CDS | 3043165 | 2322 | + | 0.670543 |
NA | RPB_4352 | UDP-N-acetylglucosamine1-carboxyvinyltransferase | RecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase; Short=EPT; | chromosome | CDS | 4935765 | 1290 | - | 0.660465 |
NA | RPB_1562 | dTDP-glucose 4,6-dehydratase | RecName: Full=dTDP-glucose 4,6-dehydratase; EC=4.2.1.46; | chromosome | CDS | 1761212 | 1062 | + | 0.653484 |
NA | RPB_2393 | Serine-type D-Ala-D-Ala carboxypeptidase | SubName: Full=Serine-type D-Ala-D-Ala carboxypeptidase; EC=3.4.16.4; Flags: Precursor; | chromosome | CDS | 2744538 | 1722 | - | 0.680604 |
NA | RPB_0041 | Penicillin-binding protein 1A | SubName: Full=Penicillin-binding protein 1A; EC=2.4.1.129; | chromosome | CDS | 40187 | 2208 | + | 0.6875 |
NA | RPB_2757 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 3144029 | 1131 | - | 0.646331 |
NA | RPB_3411 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 3898432 | 1092 | - | 0.668498 |
NA | RPB_2460 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 2816934 | 1146 | + | 0.699825 |
NA | RPB_2100 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome | CDS | 2387545 | 987 | + | 0.680851 |
NA | RPB_3561 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 4076950 | 1242 | - | 0.666667 |
NA | RPB_1104 | Cell wall hydrolase, SleB | SubName: Full=Cell wall hydrolase, SleB; | chromosome | CDS | 1269952 | 1419 | + | 0.67019 |
NA | RPB_1547 | Glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 1743262 | 1194 | + | 0.650754 |
NA | RPB_0390 | methyltransferase GidB | RecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.170; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; | chromosome | CDS | 433056 | 714 | - | 0.661064 |
NA | RPB_1602 | ADP-L-glycero-D-manno-heptose-6-epimerase | SubName: Full=ADP-glyceromanno-heptose 6-epimerase; EC=5.1.3.20; | chromosome | CDS | 1805262 | 981 | + | 0.641182 |
NA | RPB_3805 | Cytidyltransferase-related | SubName: Full=Cytidyltransferase-related; | chromosome | CDS | 4342480 | 1485 | - | 0.663973 |
NA | RPB_2216 | TonB-like protein | SubName: Full=TonB-like protein; | chromosome | CDS | 2529144 | 708 | + | 0.680791 |
NA | RPB_4535 | UTP-glucose-1-phosphate uridylyltransferase | SubName: Full=UDP-glucose pyrophosphorylase; EC=2.7.7.9; | chromosome | CDS | 5128382 | 876 | + | 0.652968 |
NA | RPB_1991 | phospho-N-acetylmuramoyl-pentapeptide-transferase | RecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; | chromosome | CDS | 2261901 | 1086 | + | 0.646409 |
NA | RPB_3811 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome | CDS | 4348909 | 939 | - | 0.641108 |
NA | RPB_1540 | Glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 1734621 | 1245 | + | 0.641767 |
NA | RPB_1994 | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase | RecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; | chromosome | CDS | 2265952 | 1101 | + | 0.722071 |
NA | RPB_1554 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome | CDS | 1751867 | 1017 | + | 0.611603 |
NA | RPB_2068 | DegT/DnrJ/EryC1/StrS aminotransferase | SubName: Full=DegT/DnrJ/EryC1/StrS aminotransferase; | chromosome | CDS | 2350041 | 1143 | + | 0.71741 |
NA | RPB_3129 | Secretin/TonB, short-like protein | SubName: Full=Secretin/TonB, short-like protein; Flags: Precursor; | chromosome | CDS | 3574914 | 756 | - | 0.619048 |
NA | RPB_0262 | sugar nucleotide dehydratase | SubName: Full=Sugar nucleotide dehydratase; | chromosome | CDS | 295742 | 954 | + | 0.644654 |
NA | RPB_2618 | NmrA-like protein | SubName: Full=NmrA-like protein; | chromosome | CDS | 3000159 | 885 | - | 0.712994 |
NA | RPB_0057 | MscS Mechanosensitive ion channel | SubName: Full=MscS Mechanosensitive ion channel; | chromosome | CDS | 59695 | 1314 | + | 0.655251 |
NA | RPB_2236 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; | chromosome | CDS | 2560189 | 1215 | - | 0.649383 |
NA | RPB_0627 | Nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; | chromosome | CDS | 708337 | 723 | + | 0.680498 |
NA | RPB_2659 | sugar transferase | SubName: Full=Sugar transferase; | chromosome | CDS | 3040048 | 1530 | - | 0.638562 |
NA | RPB_1526 | NAD-dependent epimerase/dehydratase | RecName: Full=GDP-L-fucose synthase; EC=1.1.1.271; AltName: Full=GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; | chromosome | CDS | 1719117 | 954 | + | 0.604822 |
NA | RPB_4119 | Lytic murein transglycosylase | SubName: Full=Lytic murein transglycosylase; Flags: Precursor; | chromosome | CDS | 4690935 | 819 | - | 0.667888 |
NA | RPB_3358 | lipid A biosynthesis acyltransferase | SubName: Full=Lipid A biosynthesis acyltransferase; | chromosome | CDS | 3839802 | 933 | + | 0.670954 |
NA | RPB_4237 | Glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 4812559 | 1086 | - | 0.708103 |
NA | RPB_2918 | Penicillin-binding protein 1C | SubName: Full=Penicillin-binding protein 1C; | chromosome | CDS | 3326640 | 2196 | - | 0.697632 |
NA | RPB_1603 | Bifunctional D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate adenosyltransferase | RecName: Full=Bifunctional protein HldE; Includes: RecName: Full=D-beta-D-heptose 7-phosphate kinase; EC=2.7.1.167; AltName: Full=D-beta-D-heptose 7-phosphotransferase; AltName: Full=D-glycero-beta-D-manno-heptose-7-phosphate kinase; Includes: RecName: Full=D-beta-D-heptose 1-phosphate adenylyltransferase; EC=2.7.7.70; AltName: Full=D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase; | chromosome | CDS | 1806268 | 1473 | + | 0.691107 |
NA | RPB_4560 | outer membrane protein | SubName: Full=Outer membrane protein; Flags: Precursor; | chromosome | CDS | 5154398 | 717 | + | 0.663877 |
NA | RPB_0468 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 514959 | 1542 | - | 0.697795 |
NA | RPB_2353 | Dihydrodipicolinate synthetase | SubName: Full=Dihydrodipicolinate synthetase; | chromosome | CDS | 2703577 | 954 | + | 0.66457 |
NA | RPB_3506 | Penicillin-binding protein 1A | SubName: Full=Penicillin-binding protein 1A; EC=2.4.1.129; | chromosome | CDS | 4013583 | 2310 | + | 0.675325 |
NA | RPB_2092 | TonB-like protein | SubName: Full=TonB-like protein; Flags: Precursor; | chromosome | CDS | 2377734 | 795 | + | 0.690566 |
NA | RPB_2005 | UDP-3-0-acyl N-acetylglucosamine deacetylase | SubName: Full=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; EC=3.5.1.-; | chromosome | CDS | 2279263 | 963 | + | 0.672897 |
NA | RPB_1989 | UDP-N-acetylmuramyl-tripeptide synthetases | RecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13; AltName: Full=Meso-A2pm-adding enzyme; AltName: Full=Meso-diaminopimelate-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; | chromosome | CDS | 2258997 | 1458 | + | 0.705761 |
NA | RPB_4301 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 4888903 | 1008 | - | 0.694444 |
NA | RPB_1535 | UDP-N-acetylglucosamine 2-epimerase | SubName: Full=UDP-N-acetylglucosamine 2-epimerase; EC=5.1.3.14; | chromosome | CDS | 1728992 | 1158 | + | 0.61399 |
NA | RPB_1585 | UDP-glucose 6-dehydrogenase | SubName: Full=UDP-glucose 6-dehydrogenase; EC=1.1.1.22; Flags: Precursor; | chromosome | CDS | 1784879 | 1308 | - | 0.676606 |
NA | RPB_0331 | Beta-Ig-H3/fasciclin | SubName: Full=Beta-Ig-H3/fasciclin; Flags: Precursor; | chromosome | CDS | 376744 | 582 | + | 0.649485 |
NA | RPB_1990 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase | RecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; | chromosome | CDS | 2260451 | 1440 | + | 0.688194 |
NA | RPB_1008 | Lipopolysaccharide biosynthesis | SubName: Full=Lipopolysaccharide biosynthesis; | chromosome | CDS | 1154444 | 2064 | + | 0.693314 |
NA | RPB_1534 | N-acetylneuraminate synthase | SubName: Full=N-acetylneuraminate synthase; EC=2.5.1.56; | chromosome | CDS | 1727997 | 999 | + | 0.612613 |
NA | RPB_2917 | Glycosyl transferase, family 39 | SubName: Full=Glycosyl transferase, family 39; | chromosome | CDS | 3324846 | 1743 | - | 0.683878 |
NA | RPB_2902 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; | chromosome | CDS | 3307639 | 1395 | - | 0.690323 |
NA | RPB_1626 | Mandelate racemase/muconate lactonizing enzyme | SubName: Full=Mandelate racemase/muconate lactonizing enzyme; | chromosome | CDS | 1832529 | 996 | - | 0.727912 |
NA | RPB_2817 | acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase | SubName: Full=Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; EC=2.3.1.129; | chromosome | CDS | 3210407 | 843 | - | 0.669039 |
NA | RPB_1007 | Glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 1152771 | 1251 | - | 0.716227 |
NA | RPB_1539 | Glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 1733326 | 1296 | + | 0.675926 |
NA | RPB_2820 | surface antigen (D15) | RecName: Full=Outer membrane protein assembly factor BamA; Flags: Precursor; | chromosome | CDS | 3212823 | 2538 | - | 0.632388 |
NA | RPB_1178 | outer membrane protein | SubName: Full=Outer membrane protein; Flags: Precursor; | chromosome | CDS | 1352116 | 624 | + | 0.615385 |
NA | RPB_4222 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 4797019 | 1107 | - | 0.690154 |
NA | RPB_1598 | Lipopolysaccharide heptosyltransferase I | SubName: Full=Lipopolysaccharide heptosyltransferase I; | chromosome | CDS | 1801858 | 945 | + | 0.687831 |
NA | RPB_1529 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1722311 | 1218 | - | 0.636289 |
NA | RPB_2002 | Cell division protein FtsQ | RecName: Full=Cell division protein FtsQ; | chromosome | CDS | 2274709 | 999 | + | 0.678679 |
NA | RPB_0900 | OmpA/MotB | SubName: Full=OmpA/MotB; Flags: Precursor; | chromosome | CDS | 1036991 | 627 | - | 0.649123 |
NA | RPB_0895 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 1030326 | 969 | - | 0.701754 |
NA | RPB_3410 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 3897362 | 1074 | - | 0.660149 |
NA | RPB_1735 | Carbohydrate-selective porin OprB | SubName: Full=Carbohydrate-selective porin OprB; Flags: Precursor; | chromosome | CDS | 1981409 | 1350 | - | 0.672593 |
NA | RPB_2924 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3337683 | 909 | - | 0.679868 |
NA | RPB_3668 | putative efflux protein | SubName: Full=Putative efflux protein; | chromosome | CDS | 4209944 | 792 | - | 0.657828 |
NA | RPB_2815 | lipid-A-disaccharide synthase | RecName: Full=Lipid-A-disaccharide synthase; EC=2.4.1.182; | chromosome | CDS | 3208353 | 1182 | - | 0.691201 |
NA | RPB_2001 | D-alanine--D-alanine ligase | SubName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; | chromosome | CDS | 2273447 | 990 | + | 0.69495 |
NA | RPB_0901 | outer membrane autotransporter | SubName: Full=Outer membrane autotransporter; Flags: Precursor; | chromosome | CDS | 1038118 | 1917 | + | 0.662493 |
NA | RPB_2784 | 2-dehydro-3-deoxyphosphooctonate aldolase | RecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; EC=2.5.1.55; AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthase; AltName: Full=KDO-8-phosphate synthase; Short=KDO 8-P synthase; Short=KDOPS; AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase; | chromosome | CDS | 3174268 | 864 | - | 0.672454 |
NA | RPB_4324 | OmpW | SubName: Full=OmpW; Flags: Precursor; | chromosome | CDS | 4907087 | 690 | - | 0.637681 |
NA | RPB_3694 | Glutamate racemase | RecName: Full=Glutamate racemase; EC=5.1.1.3; | chromosome | CDS | 4234251 | 795 | + | 0.703145 |
NA | RPB_1528 | NAD-dependent epimerase/dehydratase | RecName: Full=GDP-L-fucose synthase; EC=1.1.1.271; AltName: Full=GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; | chromosome | CDS | 1721267 | 1014 | + | 0.63215 |
NA | RPB_0401 | membrane-bound lytic murein transglycosylase | SubName: Full=Membrane-bound lytic murein transglycosylase; | chromosome | CDS | 445419 | 1521 | + | 0.684418 |
NA | RPB_2925 | Glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 3338658 | 1122 | - | 0.695187 |
NA | RPB_0492 | LrgB-like protein | SubName: Full=LrgB-like protein; | chromosome | CDS | 551346 | 726 | - | 0.694215 |
NA | RPB_3337 | Substrate-binding region of ABC-type glycine betaine/choline transport system | SubName: Full=Substrate-binding region of ABC-type glycine betaine/choline transport system; | chromosome | CDS | 3817274 | 1560 | + | 0.703846 |