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2024-05-07 12:35:49

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Rhodopseudomonas palustris HaA2, HaA2

Number of genes found: 217

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Rhodopseudomonas palustris HaA2, HaA2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RPB_2568 Secretion protein HlyDchromosome CDS2950177 1239 - 0.673123
NA RPB_2906 Cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS3313121 1230 + 0.645528
NA RPB_1989 UDP-N-acetylmuramyl-tripeptide synthetaseschromosome CDS2258997 1458 + 0.705761
NA RPB_2815 lipid-A-disaccharide synthasechromosome CDS3208353 1182 - 0.691201
NA RPB_3811 NAD-dependent epimerase/dehydratasechromosome CDS4348909 939 - 0.641108
NA RPB_1178 outer membrane proteinchromosome CDS1352116 624 + 0.615385
NA RPB_4245 Peptidase M23Bchromosome CDS4826867 2043 + 0.679883
NA RPB_2229 Lytic transglycosylase, catalyticchromosome CDS2541986 792 + 0.671717
NA RPB_4222 Secretion protein HlyDchromosome CDS4797019 1107 - 0.690154
NA RPB_2241 Type I secretion outer membrane protein, TolCchromosome CDS2568705 1575 + 0.645079
NA RPB_1345 Serine-type D-Ala-D-Ala carboxypeptidasechromosome CDS1531960 1500 - 0.678
NA RPB_3668 putative efflux proteinchromosome CDS4209944 792 - 0.657828
NA RPB_0886 glycosyl transferaseschromosome CDS1013469 2022 - 0.708704
NA RPB_0269 rare lipoprotein Achromosome CDS303167 483 + 0.668737
NA RPB_3694 Glutamate racemasechromosome CDS4234251 795 + 0.703145
NA RPB_3882 Protein of unknown function DUF214chromosome CDS4436412 1227 - 0.682967
NA RPB_1640 Type I secretion membrane fusion protein, HlyDchromosome CDS1869479 1338 + 0.599402
NA RPB_1551 NAD-dependent epimerase/dehydratasechromosome CDS1748465 909 + 0.674367
NA RPB_4324 OmpWchromosome CDS4907087 690 - 0.637681
NA RPB_2757 Secretion protein HlyDchromosome CDS3144029 1131 - 0.646331
NA RPB_3007 Penicillin-binding protein 1Achromosome CDS3425035 2493 - 0.663057
NA RPB_3839 Glycosyl transferase, group 1chromosome CDS4384806 1335 - 0.68764
NA RPB_1565 glucose-1-phosphate thymidylyltransferasechromosome CDS1763766 879 + 0.645051
NA RPB_1855 Three-deoxy-D-manno-octulosonic-acidtransferase-likechromosome CDS2120158 1347 + 0.700817
NA RPB_2223 conserved hypothetical proteinchromosome CDS2536606 744 + 0.677419
NA RPB_0163 NmrA-like proteinchromosome CDS175990 672 - 0.715774
NA RPB_1528 NAD-dependent epimerase/dehydratasechromosome CDS1721267 1014 + 0.63215
NA RPB_4181 lipoprotein signal peptidasechromosome CDS4753652 498 - 0.636546
NA RPB_1815 OmpA/MotBchromosome CDS2076745 498 + 0.658635
NA RPB_2005 UDP-3-0-acyl N-acetylglucosamine deacetylasechromosome CDS2279263 963 + 0.672897
NA RPB_3514 Peptidoglycan-binding domain 1chromosome CDS4022130 804 - 0.735075
NA RPB_2781 Glycosyl transferase, family 2chromosome CDS3169108 2163 + 0.6773
NA RPB_2659 sugar transferasechromosome CDS3040048 1530 - 0.638562
NA RPB_2238 Secretion protein HlyDchromosome CDS2562396 1296 + 0.658951
NA RPB_0258 carboxyl-terminal proteasechromosome CDS290963 1374 + 0.650655
NA RPB_0895 Secretion protein HlyDchromosome CDS1030326 969 - 0.701754
NA RPB_2894 Type I secretion outer membrane protein, TolCchromosome CDS3295455 1383 - 0.655098
NA RPB_1147 Aspartate racemasechromosome CDS1319719 726 + 0.655647
NA RPB_1988 Peptidoglycan glycosyltransferasechromosome CDS2257126 1755 + 0.659829
NA RPB_1564 dTDP-4-dehydrorhamnose reductasechromosome CDS1762856 897 + 0.720178
NA RPB_2618 NmrA-like proteinchromosome CDS3000159 885 - 0.712994
NA RPB_3590 OmpA/MotBchromosome CDS4114920 1356 - 0.708702
NA RPB_2602 dihydrodipicolinate synthasechromosome CDS2987118 891 + 0.657688
NA RPB_0390 methyltransferase GidBchromosome CDS433056 714 - 0.661064
NA RPB_3608 Secretion protein HlyDchromosome CDS4140591 1203 - 0.679136
NA RPB_1844 Glycosyl transferase, family 2chromosome CDS2110159 1044 - 0.681035
NA RPB_2902 Secretion protein HlyDchromosome CDS3307639 1395 - 0.690323
NA RPB_1102 Secretion protein HlyDchromosome CDS1265108 1413 + 0.661713
NA RPB_0901 outer membrane autotransporterchromosome CDS1038118 1917 + 0.662493
NA RPB_0051 Peptidase U6, penicillin-insensitive murein endopeptidasechromosome CDS54035 957 + 0.703239
NA RPB_0627 Nucleotidyl transferasechromosome CDS708337 723 + 0.680498
NA RPB_3382 diacylglycerol kinasechromosome CDS3866713 354 - 0.666667
NA RPB_1622 Glycosyl transferase, group 1chromosome CDS1827408 1059 + 0.707271
NA RPB_0515 Monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS575982 684 - 0.695906
NA RPB_1104 Cell wall hydrolase, SleBchromosome CDS1269952 1419 + 0.67019
NA RPB_3003 Peptidase M23Bchromosome CDS3420507 1374 + 0.694323
NA RPB_1729 hydroxymethylbutenyl pyrophosphate reductasechromosome CDS1971758 945 - 0.647619
NA RPB_2714 outer membrane proteinchromosome CDS3098506 732 + 0.653005
NA RPB_3008 N-acetylmuramoyl-L-alanine amidasechromosome CDS3427721 1311 - 0.652937
NA RPB_2925 Glycosyl transferase, group 1chromosome CDS3338658 1122 - 0.695187
NA RPB_3840 Glycosyl transferase, family 2chromosome CDS4386405 1044 + 0.705939
NA RPB_1539 Glycosyl transferase, group 1chromosome CDS1733326 1296 + 0.675926
NA RPB_3459 Putative phage cell wall peptidase, NlpC/P60chromosome CDS3969295 444 - 0.707207
NA RPB_2068 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS2350041 1143 + 0.71741
NA RPB_3411 Secretion protein HlyDchromosome CDS3898432 1092 - 0.668498
NA RPB_0331 Beta-Ig-H3/fasciclinchromosome CDS376744 582 + 0.649485
NA RPB_2678 Serine-type D-Ala-D-Ala carboxypeptidasechromosome CDS3059834 1260 + 0.653175
NA RPB_1012 UDP-glucose 4-epimerasechromosome CDS1160679 984 - 0.680894
NA RPB_1243 TonB-like proteinchromosome CDS1421753 879 + 0.739477
NA RPB_2784 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS3174268 864 - 0.672454
NA RPB_2661 Lipopolysaccharide biosynthesischromosome CDS3043165 2322 + 0.670543
NA RPB_1534 N-acetylneuraminate synthasechromosome CDS1727997 999 + 0.612613
NA RPB_4521 Lytic murein transglycosylasechromosome CDS5108270 1395 + 0.678136
NA RPB_3410 Secretion protein HlyDchromosome CDS3897362 1074 - 0.660149
NA RPB_4295 Secretion protein HlyDchromosome CDS4881600 1107 - 0.701897
NA RPB_0321 OmpA/MotBchromosome CDS365653 1956 - 0.751023
NA RPB_2092 TonB-like proteinchromosome CDS2377734 795 + 0.690566
NA RPB_4061 Mandelate racemase/muconate lactonizing enzymechromosome CDS4632059 1128 + 0.695922
NA RPB_1603 Bifunctional D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate adenosyltransferasechromosome CDS1806268 1473 + 0.691107
NA RPB_1082 conserved hypothetical proteinchromosome CDS1241525 1509 + 0.713055
NA RPB_2199 putative outer membrane proteinchromosome CDS2492147 714 + 0.673669
NA RPB_0801 Type I secretion membrane fusion protein, HlyDchromosome CDS898198 1323 - 0.681784
NA RPB_1924 Lytic murein transglycosylasechromosome CDS2196537 1236 + 0.680421
NA RPB_1340 hydroxymethylbutenyl pyrophosphate reductasechromosome CDS1526621 966 + 0.675983
NA RPB_2917 Glycosyl transferase, family 39chromosome CDS3324846 1743 - 0.683878
NA RPB_2676 rare lipoprotein Achromosome CDS3057767 945 + 0.671958
NA RPB_0057 MscS Mechanosensitive ion channelchromosome CDS59695 1314 + 0.655251
NA RPB_2393 Serine-type D-Ala-D-Ala carboxypeptidasechromosome CDS2744538 1722 - 0.680604
NA RPB_1547 Glycosyl transferase, group 1chromosome CDS1743262 1194 + 0.650754
NA RPB_1011 glycosyl transferase, WecB/TagA/CpsF familychromosome CDS1159529 912 - 0.685307
NA RPB_0401 membrane-bound lytic murein transglycosylasechromosome CDS445419 1521 + 0.684418
NA RPB_3561 Secretion protein HlyDchromosome CDS4076950 1242 - 0.666667
NA RPB_1605 Glycosyl transferase, family 4chromosome CDS1809716 1020 - 0.646078
NA RPB_3129 Secretin/TonB, short-like proteinchromosome CDS3574914 756 - 0.619048
NA RPB_0594 apolipoprotein N-acyltransferasechromosome CDS666514 1611 + 0.657356
NA RPB_1986 methyltransferasechromosome CDS2255736 1014 + 0.713018
NA RPB_0041 Penicillin-binding protein 1Achromosome CDS40187 2208 + 0.6875
NA RPB_4485 Cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS5072369 1026 - 0.653021
NA RPB_1604 NAD-dependent epimerase/dehydratasechromosome CDS1807772 1956 + 0.620143
NA RPB_1626 Mandelate racemase/muconate lactonizing enzymechromosome CDS1832529 996 - 0.727912
NA RPB_0311 Membrane bound O-acyl transferase, MBOATchromosome CDS352393 1473 - 0.646979
NA RPB_3035 Lytic transglycosylase, catalyticchromosome CDS3457737 2244 + 0.681818
NA RPB_4101 Glycosyl transferase, family 2chromosome CDS4669760 1173 - 0.671782
NA RPB_1609 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS1813288 1152 + 0.662326
NA RPB_1008 Lipopolysaccharide biosynthesischromosome CDS1154444 2064 + 0.693314
NA RPB_3304 Secretion protein HlyDchromosome CDS3778449 1191 - 0.698573
NA RPB_3497 Choloylglycine hydrolasechromosome CDS4002275 1068 + 0.652622
NA RPB_2660 Glycosyl transferase, group 1chromosome CDS3041701 1170 - 0.689744
NA RPB_0468 conserved hypothetical proteinchromosome CDS514959 1542 - 0.697795
NA RPB_2399 Lytic transglycosylase, catalyticchromosome CDS2754378 993 + 0.69285
NA RPB_0378 Outer membrane lipoprotein carrier protein LolAchromosome CDS419473 954 + 0.665618
NA RPB_2817 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferasechromosome CDS3210407 843 - 0.669039
NA RPB_1553 UDP-glucose/GDP-mannose dehydrogenasechromosome CDS1750581 1272 + 0.60456
NA RPB_4352 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS4935765 1290 - 0.660465
NA RPB_0890 Secretion protein HlyDchromosome CDS1020195 921 - 0.693811
NA RPB_1598 Lipopolysaccharide heptosyltransferase Ichromosome CDS1801858 945 + 0.687831
NA RPB_2918 Penicillin-binding protein 1Cchromosome CDS3326640 2196 - 0.697632
NA RPB_1856 tetraacyldisaccharide 4'-kinasechromosome CDS2121497 1017 + 0.704031
NA RPB_1602 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS1805262 981 + 0.641182
NA RPB_1768 3-deoxy-D-manno-octulosonatecytidylyltransferasechromosome CDS2026750 780 - 0.7
NA RPB_0288 GCN5-related N-acetyltransferasechromosome CDS326291 618 + 0.686084
NA RPB_2958 Lytic murein transglycosylasechromosome CDS3367955 1227 + 0.691932
NA RPB_0469 Small GTP-binding protein domainchromosome CDS516521 1935 + 0.636176
NA RPB_1994 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS2265952 1101 + 0.722071
NA RPB_4708 Polysaccharide export proteinchromosome CDS5328176 660 - 0.690909
NA RPB_4203 Lytic murein transglycosylasechromosome CDS4774711 1377 + 0.678286
NA RPB_1597 UDP-glucose 4-epimerasechromosome CDS1800656 1014 - 0.658777
NA RPB_4237 Glycosyl transferase, group 1chromosome CDS4812559 1086 - 0.708103
NA RPB_2100 NAD-dependent epimerase/dehydratasechromosome CDS2387545 987 + 0.680851
NA RPB_4194 MscS Mechanosensitive ion channelchromosome CDS4766136 1689 - 0.670811
NA RPB_3804 Nucleotidyl transferasechromosome CDS4341566 918 - 0.654684
NA RPB_3838 conserved hypothetical proteinchromosome CDS4383488 1311 - 0.682685
NA RPB_2855 Nucleotidyl transferasechromosome CDS3254379 1359 - 0.667403
NA RPB_3810 dTDP-glucose 4,6-dehydratasechromosome CDS4347875 1038 - 0.659923
NA RPB_1502 alanine racemasechromosome CDS1696860 1167 + 0.66838
NA RPB_1537 hypothetical proteinchromosome CDS1730876 1713 + 0.637478
NA RPB_2820 surface antigen (D15)chromosome CDS3212823 2538 - 0.632388
NA RPB_3644 hypothetical proteinchromosome CDS4180417 381 - 0.653543
NA RPB_0492 LrgB-like proteinchromosome CDS551346 726 - 0.694215
NA RPB_1554 NAD-dependent epimerase/dehydratasechromosome CDS1751867 1017 + 0.611603
NA RPB_4119 Lytic murein transglycosylasechromosome CDS4690935 819 - 0.667888
NA RPB_1007 Glycosyl transferase, group 1chromosome CDS1152771 1251 - 0.716227
NA RPB_2460 conserved hypothetical proteinchromosome CDS2816934 1146 + 0.699825
NA RPB_2353 Dihydrodipicolinate synthetasechromosome CDS2703577 954 + 0.66457
NA RPB_2243 Type I secretion membrane fusion protein, HlyDchromosome CDS2572670 1335 + 0.64794
NA RPB_2736 Peptidase M23Bchromosome CDS3120772 1425 - 0.717193
NA RPB_1991 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS2261901 1086 + 0.646409
NA RPB_1996 UDP-N-acetylmuramate--alanine ligasechromosome CDS2268066 1407 + 0.663113
NA RPB_0751 surface antigenchromosome CDS840299 2523 + 0.62505
NA RPB_0565 hypothetical proteinchromosome CDS635826 987 - 0.697062
NA RPB_4525 Dihydrodipicolinate synthetasechromosome CDS5113782 912 + 0.689693
NA RPB_1998 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS2269969 930 + 0.698925
NA RPB_2002 Cell division protein FtsQchromosome CDS2274709 999 + 0.678679
NA RPB_1535 UDP-N-acetylglucosamine 2-epimerasechromosome CDS1728992 1158 + 0.61399
NA RPB_2915 Glycosyl transferase, family 2chromosome CDS3323145 759 - 0.683794
NA RPB_0772 OmpA/MotBchromosome CDS865318 1395 + 0.69319
NA RPB_2216 TonB-like proteinchromosome CDS2529144 708 + 0.680791
NA RPB_1633 Type I secretion outer membrane protein, TolCchromosome CDS1839424 1560 + 0.623077
NA RPB_2457 alanine racemasechromosome CDS2813220 1272 - 0.691824
NA RPB_3657 glycosyl transferase, family 39chromosome CDS4197974 1491 - 0.681422
NA RPB_1536 Acylneuraminate cytidylyltransferasechromosome CDS1730181 696 + 0.663793
NA RPB_3452 LipA a lipoproteinchromosome CDS3958897 507 - 0.719921
NA RPB_1543 Glycosyl transferase, family 2chromosome CDS1739152 744 + 0.58871
NA RPB_1309 conserved hypothetical proteinchromosome CDS1491948 801 + 0.64794
NA RPB_3358 lipid A biosynthesis acyltransferasechromosome CDS3839802 933 + 0.670954
NA RPB_1540 Glycosyl transferase, group 1chromosome CDS1734621 1245 + 0.641767
NA RPB_2819 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferasechromosome CDS3211715 1080 - 0.644444
NA RPB_3795 conserved hypothetical proteinchromosome CDS4330897 342 + 0.646199
NA RPB_3506 Penicillin-binding protein 1Achromosome CDS4013583 2310 + 0.675325
NA RPB_1657 TonB-like proteinchromosome CDS1886570 840 + 0.709524
NA RPB_2598 Lipoprotein releasing system, transmembrane protein, LolC/E familychromosome CDS2980197 1281 + 0.641686
NA RPB_2924 hypothetical proteinchromosome CDS3337683 909 - 0.679868
NA RPB_4535 UTP-glucose-1-phosphate uridylyltransferasechromosome CDS5128382 876 + 0.652968
NA RPB_3883 Secretion protein HlyDchromosome CDS4437635 1275 - 0.703529
NA RPB_2236 Secretion protein HlyDchromosome CDS2560189 1215 - 0.649383
NA RPB_2001 D-alanine--D-alanine ligasechromosome CDS2273447 990 + 0.69495
NA RPB_1563 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS1762295 558 + 0.639785
NA RPB_2145 outer membrane proteinchromosome CDS2434591 825 + 0.632727
NA RPB_1526 NAD-dependent epimerase/dehydratasechromosome CDS1719117 954 + 0.604822
NA RPB_1601 Lipopolysaccharide heptosyltransferase IIchromosome CDS1804001 1077 - 0.687094
NA RPB_1735 Carbohydrate-selective porin OprBchromosome CDS1981409 1350 - 0.672593
NA RPB_4027 Secretion protein HlyDchromosome CDS4596683 1200 - 0.6825
NA RPB_1776 NLP/P60chromosome CDS2037082 885 - 0.693785
NA RPB_2957 Peptidase M23Bchromosome CDS3366242 1623 + 0.700555
NA RPB_1990 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligasechromosome CDS2260451 1440 + 0.688194
NA RPB_0567 OmpA-like transmembrane domainchromosome CDS639289 1986 - 0.675227
NA RPB_3805 Cytidyltransferase-relatedchromosome CDS4342480 1485 - 0.663973
NA RPB_2603 large conductance mechanosensitive channel proteinchromosome CDS2988060 432 + 0.648148
NA RPB_3558 Type I secretion outer membrane protein, TolCchromosome CDS4071544 1419 + 0.6716
NA RPB_0618 Peptidoglycan-binding domain 1chromosome CDS696546 1383 + 0.689082
NA RPB_4164 prolipoprotein diacylglyceryl transferasechromosome CDS4735603 864 + 0.662037
NA RPB_3958 Dihydrodipicolinate synthetasechromosome CDS4518274 876 - 0.66895
NA RPB_0262 sugar nucleotide dehydratasechromosome CDS295742 954 + 0.644654
NA RPB_2854 glucosamine--fructose-6-phosphate aminotransferase, isomerizingchromosome CDS3252407 1827 - 0.654625
NA RPB_0900 OmpA/MotBchromosome CDS1036991 627 - 0.649123
NA RPB_2426 Peptidase M15D, vanX D-ala-D-ala dipeptidasechromosome CDS2783161 753 + 0.669323
NA RPB_1457 AsmAchromosome CDS1645826 1965 - 0.692112
NA RPB_2240 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS2566836 1557 + 0.67052
NA RPB_2821 Peptidase M50, putative membrane-associated zinc metallopeptidasechromosome CDS3215528 1152 - 0.618056
NA RPB_1552 NAD-dependent epimerase/dehydratasechromosome CDS1749350 975 - 0.620513
NA RPB_3650 Secretion protein HlyDchromosome CDS4189890 1194 - 0.668342
NA RPB_4560 outer membrane proteinchromosome CDS5154398 717 + 0.663877
NA RPB_2903 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS3309023 1449 - 0.673568
NA RPB_1585 UDP-glucose 6-dehydrogenasechromosome CDS1784879 1308 - 0.676606
NA RPB_1550 Glycosyl transferase, group 1chromosome CDS1747269 1140 + 0.640351
NA RPB_1992 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS2263174 1401 + 0.691649
NA RPB_4301 Secretion protein HlyDchromosome CDS4888903 1008 - 0.694444
NA RPB_0896 OmpA/MotBchromosome CDS1031508 639 - 0.668232
NA RPB_1562 dTDP-glucose 4,6-dehydratasechromosome CDS1761212 1062 + 0.653484
NA RPB_1033 Glycosyl transferase, group 1chromosome CDS1185888 1068 - 0.650749
NA RPB_1529 hypothetical proteinchromosome CDS1722311 1218 - 0.636289
NA RPB_0660 dehydrogenasechromosome CDS744542 966 + 0.682195
NA RPB_2478 Organic solvent tolerance proteinchromosome CDS2834360 2502 - 0.621503
NA RPB_0171 Secretion protein HlyDchromosome CDS185450 1071 - 0.688142
NA RPB_0892 AsmAchromosome CDS1023804 1968 - 0.708333
NA RPB_3337 Substrate-binding region of ABC-type glycine betaine/choline transport systemchromosome CDS3817274 1560 + 0.703846
NA RPB_1525 GDP-mannose 4,6-dehydratasechromosome CDS1718054 1083 + 0.585411