TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-06 08:32:52

Gene list

Applied filters:

COG category: Cell wall/membrane biogenesis
Organism: Frankia sp. CcI3, CcI3

Number of genes found: 181

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Frankia sp. CcI3, CcI3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Francci3_3716 glycosyl transferase, family 4chromosome CDS4448092 1110 - 0.683784
NA Francci3_0274 hypothetical proteinchromosome CDS315627 585 + 0.724786
NA Francci3_1309 UDP-glucose/GDP-mannose dehydrogenasechromosome CDS1567809 1353 + 0.702882
NA Francci3_1539 Twin-arginine translocation pathway signalchromosome CDS1849264 1461 + 0.74538
NA Francci3_0041 NLP/P60chromosome CDS50181 996 + 0.709839
NA Francci3_3475 NAD-dependent epimerase/dehydratasechromosome CDS4144294 1044 - 0.720307
NA Francci3_3509 Peptidoglycan-binding LysMchromosome CDS4193550 375 - 0.709333
NA Francci3_3700 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS4434817 1260 - 0.699206
NA Francci3_4361 NAD-dependent epimerase/dehydratasechromosome CDS5208561 1296 - 0.740741
NA Francci3_0713 glucose-1-phosphate thymidyltransferasechromosome CDS817471 1077 + 0.65831
NA Francci3_1573 glycosyl transferase, family 2chromosome CDS1887408 972 - 0.693416
NA Francci3_1310 glycosyl transferase, group 1chromosome CDS1569297 1191 + 0.716205
NA Francci3_0203 NAD-dependent epimerase/dehydratasechromosome CDS240985 714 + 0.697479
NA Francci3_0724 ABC-2chromosome CDS833482 957 - 0.666667
NA Francci3_1562 glycosyl transferase, group 1chromosome CDS1874078 1392 + 0.654454
NA Francci3_1564 NAD-dependent epimerase/dehydratasechromosome CDS1876245 1041 + 0.653218
NA Francci3_4311 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidasechromosome CDS5149597 1452 + 0.745179
NA Francci3_0171 glycosyl transferase, group 1chromosome CDS201952 1269 - 0.732072
NA Francci3_3363 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS3991810 1272 - 0.731132
NA Francci3_2376 conserved hypothetical proteinchromosome CDS2753686 915 - 0.637158
NA Francci3_0945 hypothetical proteinchromosome CDS1112522 1170 + 0.684615
NA Francci3_1053 GDP-mannose 4,6-dehydratasechromosome CDS1251776 1002 - 0.647705
NA Francci3_3936 lipopolysaccharide biosynthesischromosome CDS4711052 1575 - 0.704127
NA Francci3_0734 glycosyl transferase, group 1chromosome CDS848535 1416 + 0.742938
NA Francci3_3752 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS4501668 624 + 0.713141
NA Francci3_1771 hypothetical proteinchromosome CDS2106924 822 - 0.699513
NA Francci3_4277 glycosyl transferase, family 51chromosome CDS5105773 2634 - 0.691344
NA Francci3_1612 NLP/P60chromosome CDS1933152 603 - 0.651741
NA Francci3_2290 hypothetical proteinchromosome CDS2671265 351 - 0.717949
NA Francci3_1184 glycosyl transferase, group 1chromosome CDS1416444 1239 + 0.682002
NA Francci3_1311 glycosyl transferase, group 1chromosome CDS1570554 1359 + 0.737307
NA Francci3_0720 glycosyl transferase, group 1chromosome CDS827812 1227 - 0.748981
NA Francci3_0824 hydroxymethylbutenyl pyrophosphate reductasechromosome CDS962325 1494 + 0.735609
NA Francci3_4345 glycosyl transferase, group 1chromosome CDS5186038 1344 + 0.71503
NA Francci3_0178 MscS Mechanosensitive ion channelchromosome CDS209118 1638 - 0.683761
NA Francci3_1051 glycosyl transferase, group 1chromosome CDS1248968 1338 - 0.734679
NA Francci3_4195 hypothetical proteinchromosome CDS5005749 1125 + 0.695111
NA Francci3_0223 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS262847 1131 + 0.671972
NA Francci3_4245 Transglycosylase-likechromosome CDS5067612 381 + 0.690289
NA Francci3_3852 glycosyl transferase, family 2chromosome CDS4615285 816 - 0.585784
NA Francci3_2390 glycosyl transferase, family 39chromosome CDS2766776 2058 + 0.736152
NA Francci3_3641 penicillin-binding protein, transpeptidasechromosome CDS4349029 1692 - 0.73227
NA Francci3_3551 NAD-dependent epimerase/dehydratasechromosome CDS4247270 951 - 0.648791
NA Francci3_0168 NAD-dependent epimerase/dehydratasechromosome CDS198470 696 + 0.655172
NA Francci3_0622 alanine racemasechromosome CDS706513 1155 + 0.730736
NA Francci3_1668 glycogen synthasechromosome CDS2002166 1236 + 0.749191
NA Francci3_3362 glycosyl transferase, group 1chromosome CDS3990508 1302 - 0.731183
NA Francci3_3961 Glucosamine-1-phosphate N-acetyltransferasechromosome CDS4740138 1698 + 0.726737
NA Francci3_4062 hypothetical proteinchromosome CDS4859665 1071 - 0.637722
NA Francci3_1425 peptidase A8, signal peptidase IIchromosome CDS1718525 606 + 0.739274
NA Francci3_0617 glucosamine--fructose-6-phosphate aminotransferase, isomerizingchromosome CDS700552 1923 + 0.689028
NA Francci3_1605 Cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS1926549 903 - 0.675526
NA Francci3_1307 GDP-mannose 4,6-dehydratasechromosome CDS1565407 1092 + 0.669414
NA Francci3_1293 glycosyl transferase, group 1chromosome CDS1546085 1233 - 0.69262
NA Francci3_0282 Mur ligasechromosome CDS327001 1251 + 0.715428
NA Francci3_1987 mandelate racemase/muconate lactonizing enzymechromosome CDS2333656 1092 + 0.709707
NA Francci3_1407 methyltransferasechromosome CDS1694408 966 + 0.719462
NA Francci3_0015 glycosyl transferase, family 2chromosome CDS18601 2055 + 0.678346
NA Francci3_3544 dihydrodipicolinate synthasechromosome CDS4235708 1059 - 0.727101
NA Francci3_2035 NAD-dependent epimerase/dehydratasechromosome CDS2396439 1059 + 0.714825
NA Francci3_3844 NAD-dependent epimerase/dehydratasechromosome CDS4604981 858 - 0.634033
NA Francci3_0074 hypothetical proteinchromosome CDS92722 1077 - 0.703807
NA Francci3_1305 glycosyl transferase, family 4chromosome CDS1561613 1323 - 0.716553
NA Francci3_3582 peptidase M23Bchromosome CDS4282135 876 + 0.718037
NA Francci3_4538 cell wall hydrolase/autolysinchromosome CDS5422292 1317 + 0.691724
NA Francci3_3473 polysaccharide biosynthesis protein CapDchromosome CDS4141243 2001 + 0.716142
NA Francci3_1167 glycosyl transferase, group 1chromosome CDS1392902 1818 - 0.754125
NA Francci3_0010 glycosyl transferase, group 1chromosome CDS13122 1404 + 0.725783
NA Francci3_0723 ABC transporter relatedchromosome CDS832100 1263 - 0.687253
NA Francci3_1409 Peptidoglycan glycosyltransferasechromosome CDS1696137 2013 + 0.71535
NA Francci3_1393 glycosyl transferase, family 2chromosome CDS1674423 1188 - 0.75
NA Francci3_1294 NAD-dependent epimerase/dehydratasechromosome CDS1547788 1083 + 0.694367
NA Francci3_3775 hypothetical proteinchromosome CDS4523958 462 - 0.634199
NA Francci3_1363 lipid A biosynthesis acyltransferasechromosome CDS1638720 879 + 0.737201
NA Francci3_1669 dTDP-glucose 4,6-dehydratasechromosome CDS2003424 1074 - 0.684358
NA Francci3_0737 Nucleotidyl transferasechromosome CDS852426 1074 + 0.718808
NA Francci3_3550 UDP-glucose 4-epimerasechromosome CDS4245428 1068 - 0.678839
NA Francci3_1417 UDP-N-acetylmuramate--alanine ligasechromosome CDS1707364 1509 - 0.715706
NA Francci3_1907 glycosyl transferase, group 1chromosome CDS2239756 1281 - 0.736924
NA Francci3_1571 hypothetical proteinchromosome CDS1885120 1191 + 0.717044
NA Francci3_0715 dTDP-4-dehydrorhamnose reductasechromosome CDS820690 897 + 0.720178
NA Francci3_3851 glycosyl transferase, group 1chromosome CDS4613859 1062 - 0.63371
NA Francci3_3098 glycosyl transferase, group 1chromosome CDS3670095 1131 - 0.723254
NA Francci3_1154 MscS Mechanosensitive ion channelchromosome CDS1373753 1329 + 0.689992
NA Francci3_4040 UTP-glucose-1-phosphate uridylyltransferasechromosome CDS4825318 1047 - 0.686724
NA Francci3_0060 poly-gamma-glutamate biosynthesis proteinchromosome CDS75885 1218 + 0.728243
NA Francci3_0357 OmpA/MotBchromosome CDS416722 564 - 0.691489
NA Francci3_3574 peptidase M50chromosome CDS4272113 1185 - 0.657384
NA Francci3_3948 glycosyl transferase, family 2chromosome CDS4726681 1416 - 0.725989
NA Francci3_0429 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS511412 1167 + 0.703513
NA Francci3_3061 glycosyl transferase, family 2chromosome CDS3630087 1443 + 0.713791
NA Francci3_1463 Nucleotidyl transferasechromosome CDS1754940 2487 + 0.693205
NA Francci3_0285 NLP/P60chromosome CDS330380 1107 - 0.70551
NA Francci3_3014 prolipoprotein diacylglyceryl transferasechromosome CDS3579803 1230 - 0.695935
NA Francci3_1461 NLP/P60chromosome CDS1752952 1101 + 0.688465
NA Francci3_3881 hydroxymethylbutenyl pyrophosphate reductasechromosome CDS4643460 1029 + 0.674441
NA Francci3_4456 Peptidoglycan-binding domain 1chromosome CDS5328335 801 + 0.670412
NA Francci3_2527 NAD-dependent epimerase/dehydratasechromosome CDS2988758 912 + 0.722588
NA Francci3_0976 NAD-dependent epimerase/dehydratasechromosome CDS1154594 1044 - 0.713602
NA Francci3_1567 glycosyl transferase, family 2chromosome CDS1879875 1092 + 0.657509
NA Francci3_0224 NAD-dependent epimerase/dehydratasechromosome CDS263974 984 + 0.679878
NA Francci3_4434 Peptidoglycan glycosyltransferasechromosome CDS5300115 1443 + 0.684685
NA Francci3_0200 secretion protein HlyDchromosome CDS238141 1470 - 0.729252
NA Francci3_2483 poly-gamma-glutamate synthesis proteinchromosome CDS2928137 1125 + 0.684444
NA Francci3_1262 Small GTP-binding protein domainchromosome CDS1506365 2049 + 0.656906
NA Francci3_3848 glycosyl transferase, group 1chromosome CDS4609963 1128 - 0.632092
NA Francci3_4409 hypothetical proteinchromosome CDS5270664 1422 + 0.73699
NA Francci3_3949 glycosyl transferase, group 1chromosome CDS4728330 1116 + 0.698925
NA Francci3_4542 methyltransferase GidBchromosome CDS5426639 798 - 0.691729
NA Francci3_2870 Cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS3382315 1449 + 0.730849
NA Francci3_1411 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligasechromosome CDS1699854 1404 + 0.747863
NA Francci3_2272 apolipoprotein N-acyltransferasechromosome CDS2649078 1644 - 0.723236
NA Francci3_0709 UDP-glucose 6-dehydrogenasechromosome CDS811213 1335 - 0.696629
NA Francci3_1301 glycosyl transferase, family 2chromosome CDS1556212 1053 - 0.707502
NA Francci3_1581 glycosyl transferase, family 2chromosome CDS1896273 1401 + 0.701642
NA Francci3_1357 cell wall hydrolase/autolysinchromosome CDS1629706 861 + 0.730546
NA Francci3_3941 NAD-dependent epimerase/dehydratasechromosome CDS4718124 1029 - 0.66861
NA Francci3_2011 hypothetical proteinchromosome CDS2362669 561 + 0.679144
NA Francci3_3318 glycosyl transferase, family 25chromosome CDS3933219 777 + 0.660232
NA Francci3_1214 Peptidoglycan glycosyltransferasechromosome CDS1448399 2190 + 0.711872
NA Francci3_1308 UDP-N-acetylglucosamine 2-epimerasechromosome CDS1566606 1188 + 0.712121
NA Francci3_1410 UDP-N-acetylmuramyl-tripeptide synthetaseschromosome CDS1698223 1635 + 0.747401
NA Francci3_0423 NLP/P60chromosome CDS503262 1380 + 0.722464
NA Francci3_1440 hypothetical proteinchromosome CDS1732737 900 - 0.695556
NA Francci3_0814 NAD-dependent epimerase/dehydratasechromosome CDS946574 1098 - 0.724044
NA Francci3_0664 Serine-type D-Ala-D-Ala carboxypeptidasechromosome CDS759871 1656 - 0.74215
NA Francci3_0562 glycoside hydrolase, family 25chromosome CDS652761 1491 - 0.704896
NA Francci3_1926 Cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS2264466 921 - 0.698154
NA Francci3_1913 OmpA/MotBchromosome CDS2247515 1092 + 0.748168
NA Francci3_1586 glycosyl transferase, family 2chromosome CDS1902072 1335 - 0.701124
NA Francci3_3609 D-alanine--D-alanine ligasechromosome CDS4310248 1152 + 0.696181
NA Francci3_1284 glycosyl transferase, group 1chromosome CDS1535382 1209 - 0.74359
NA Francci3_0731 glycosyl transferase, group 1chromosome CDS846116 1194 + 0.744556
NA Francci3_0319 glycosyl transferase, family 39chromosome CDS371215 2388 - 0.724456
NA Francci3_1304 glycosyl transferase, group 1chromosome CDS1560118 1326 - 0.723228
NA Francci3_3549 UDP-glucose 6-dehydrogenasechromosome CDS4243822 1644 - 0.732968
NA Francci3_0106 glycosyl transferase, family 2chromosome CDS127446 762 + 0.729659
NA Francci3_3257 Cellulose synthase (UDP-forming)chromosome CDS3858261 1875 + 0.666667
NA Francci3_1338 Undecaprenyl-phosphategalactosephosphotransferasechromosome CDS1605550 1662 + 0.709988
NA Francci3_0225 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase-likechromosome CDS264960 1308 + 0.714067
NA Francci3_0456 glycosyl transferase, group 1chromosome CDS533725 1308 - 0.723242
NA Francci3_1303 Methyltransferase FkbMchromosome CDS1558262 1860 - 0.72043
NA Francci3_0196 secretion protein HlyDchromosome CDS232703 2259 - 0.737494
NA Francci3_1212 Rod shape-determining protein MreCchromosome CDS1446871 984 + 0.694106
NA Francci3_0979 glycosyl transferase, family 2chromosome CDS1157939 681 + 0.73862
NA Francci3_2271 Dolichyl-phosphate beta-D-mannosyltransferasechromosome CDS2648126 918 - 0.706972
NA Francci3_3940 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS4717498 630 - 0.715873
NA Francci3_0730 glycosyl transferase, family 2chromosome CDS845016 1095 + 0.663927
NA Francci3_1152 NmrA-likechromosome CDS1371157 1533 - 0.721461
NA Francci3_3930 Nucleotidyl transferasechromosome CDS4704013 855 + 0.669006
NA Francci3_3478 Lytic transglycosylasechromosome CDS4147221 528 + 0.702652
NA Francci3_1579 glycosyl transferase, family 2chromosome CDS1893617 864 + 0.644676
NA Francci3_0070 large conductance mechanosensitive channel proteinchromosome CDS88699 396 - 0.621212
NA Francci3_1413 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS1702379 1416 + 0.752825
NA Francci3_3862 putative integral membrane proteinchromosome CDS4625107 507 - 0.723866
NA Francci3_0965 Glycosyltransferases probably involved in cell wall biogenesis-likechromosome CDS1141010 1935 + 0.707494
NA Francci3_1415 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS1705393 1131 + 0.752431
NA Francci3_3846 glycosyl transferase, family 2chromosome CDS4607488 936 - 0.627137
NA Francci3_1577 Undecaprenyl-phosphategalactosephosphotransferasechromosome CDS1891571 1572 - 0.666031
NA Francci3_3854 Undecaprenyl-phosphategalactosephosphotransferasechromosome CDS4617096 1614 - 0.706939
NA Francci3_3613 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS4313582 1422 + 0.68706
NA Francci3_0721 glycosyl transferase, group 1chromosome CDS829084 1605 - 0.719003
NA Francci3_1412 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS1701307 1068 + 0.657303
NA Francci3_0318 glycosyl transferase, family 2chromosome CDS369431 1383 - 0.708604
NA Francci3_0829 glycosyl transferase, family 2chromosome CDS967427 1608 + 0.702114
NA Francci3_0735 glycosyl transferase, group 1chromosome CDS850033 1131 + 0.719717
NA Francci3_1302 hypothetical proteinchromosome CDS1557261 1005 - 0.703483
NA Francci3_1563 Nucleotidyl transferasechromosome CDS1875466 774 + 0.621447
NA Francci3_4526 glycosyl transferase, family 51chromosome CDS5400766 3198 - 0.705128
NA Francci3_1906 glycosyl transferase, group 1chromosome CDS2238575 1185 - 0.753586
NA Francci3_0872 Glutamate racemasechromosome CDS1014345 903 - 0.689922
NA Francci3_0479 NAD-dependent epimerase/dehydratasechromosome CDS560805 1065 + 0.68169
NA Francci3_0754 Twin-arginine translocation pathway signalchromosome CDS875722 2643 - 0.703746
NA Francci3_4365 Transglycosylase-likechromosome CDS5214161 678 + 0.724189
NA Francci3_3911 membrane bound O-acyl transferase, MBOATchromosome CDS4679840 1695 + 0.688496
NA Francci3_1164 glycosyl transferase, family 2chromosome CDS1386962 963 + 0.720665
NA Francci3_1364 Phosphatidyl-myo-inositolalpha-mannosyltransferasechromosome CDS1639606 1167 + 0.732648
NA Francci3_1574 glycosyl transferase, group 1chromosome CDS1888566 1077 + 0.652739
NA Francci3_0857 NAD-dependent epimerase/dehydratasechromosome CDS999120 1005 - 0.732338
NA Francci3_1696 NLP/P60chromosome CDS2036242 909 + 0.70077
NA Francci3_2988 Peptidoglycan-binding domain 1chromosome CDS3539142 750 - 0.708