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2024-05-26 14:51:33

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Porphyromonas gingivalis W83, W83

Number of genes found: 128

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Porphyromonas gingivalis W83, W83
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PG0160 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS183273 903 - 0.513843
NA PG1504 NAD dependent proteinSubName: Full=NAD dependent protein; chromosome CDS1581333 987 + 0.344478
NA PG0695 immunoreactive 43 kDa antigen PG32RecName: Full=Outer membrane protein 41; Short=Omp41; AltName: Full=PG32; Flags: Precursor; chromosome CDS750982 1176 - 0.44983
NA PG0922 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS981318 1224 - 0.498366
NA PG1654 D-alanyl-D-alanine dipeptidaseSubName: Full=D-alanyl-D-alanine dipeptidase; chromosome CDS1736598 624 + 0.535256
NA PG0435 capsular polysaccharide biosythesis protein, putativeSubName: Full=Capsular polysaccharide biosythesis protein, putative; chromosome CDS472798 744 - 0.448925
NA PG0539 efflux transporter, MFP component, RND familySubName: Full=Efflux transporter, MFP component, RND family; chromosome CDS590714 1053 + 0.510921
NA PG1405 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1487904 2856 - 0.482143
NA PG1141 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS1223131 1194 - 0.417085
NA PG0575 penicillin-binding protein 2, putativeSubName: Full=Penicillin-binding protein 2, putative; chromosome CDS629641 2202 + 0.522253
NA PG1179 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1260431 792 - 0.492424
NA PG0721 NLP/P60 family proteinSubName: Full=NLP/P60 family protein; chromosome CDS773987 609 + 0.512315
NA PG0129 mannosyltransferaseSubName: Full=Mannosyltransferase; chromosome CDS150725 1125 + 0.575111
NA PG1666 efflux transporter, MFP component, RND familySubName: Full=Efflux transporter, MFP component, RND family; chromosome CDS1748582 1107 + 0.507678
NA PG0118 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; chromosome CDS141349 1056 + 0.371212
NA PG2222 acyltransferase, HtrB/MsbB familySubName: Full=Acyltransferase, HtrB/MsbB family; chromosome CDS2336897 918 + 0.521787
NA PG1345 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS1425730 1122 + 0.515152
NA PG1798 immunoreactive 46 kDa antigen PG99SubName: Full=Immunoreactive 46 kDa antigen PG99; chromosome CDS1893118 1218 - 0.461412
NA PG0094 outer membrane efflux protein, putativeSubName: Full=Outer membrane efflux protein, putative; chromosome CDS109778 1506 - 0.551129
NA PG0920 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; chromosome CDS980435 681 - 0.483113
NA PG0363 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS397610 828 + 0.518116
NA PG0063 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; chromosome CDS75968 1179 - 0.523325
NA PG0679 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; chromosome CDS729734 1335 + 0.594007
NA PG0680 efflux transporter, MFP component, RND familySubName: Full=Efflux transporter, MFP component, RND family; chromosome CDS731108 1254 + 0.561404
NA PG0750 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; chromosome CDS796036 747 - 0.453815
NA PG0283 efflux transporter, MFP component, RND familySubName: Full=Efflux transporter, MFP component, RND family; chromosome CDS317085 1251 - 0.56275
NA PG1184 alginate O-acetyltransferase, putativeSubName: Full=Alginate O-acetyltransferase, putative; chromosome CDS1265425 1536 - 0.486979
NA PG1522 mandelate racemase/muconate lactonizing enzyme family proteinSubName: Full=Mandelate racemase/muconate lactonizing enzyme family protein; chromosome CDS1599190 1071 - 0.532213
NA PG1620 carboxyl-terminal protease-related proteinSubName: Full=Carboxyl-terminal protease-related protein; chromosome CDS1699505 1077 - 0.494893
NA PG0334 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; chromosome CDS368882 960 - 0.534375
NA PG1252 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS1328439 1236 - 0.5
NA PG0311 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; chromosome CDS345649 954 - 0.497904
NA PG1783 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; chromosome CDS1872008 711 + 0.462729
NA PG1855 carboxyl-terminal proteaseSubName: Full=Carboxyl-terminal protease; chromosome CDS1953932 1635 - 0.502141
NA PG1155 ADP-heptose--LPS heptosyltransferase, putativeSubName: Full=ADP-heptose--LPS heptosyltransferase, putative; chromosome CDS1236001 891 + 0.484848
NA PG0794 penicillin-binding protein 1A, putativeSubName: Full=Penicillin-binding protein 1A, putative; chromosome CDS846551 2361 + 0.490894
NA PG1393 penicillin-binding protein 2, putativeSubName: Full=Penicillin-binding protein 2, putative; chromosome CDS1474496 1866 - 0.540729
NA PG2021 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2113011 1932 - 0.495859
NA PG0906 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS970756 453 + 0.474614
NA PG0785 tonB protein, putativeSubName: Full=TonB protein, putative; chromosome CDS836990 693 - 0.507937
NA PG1235 epimerase/reductase, putativeSubName: Full=Epimerase/reductase, putative; chromosome CDS1310390 957 - 0.481714
NA PG0538 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; chromosome CDS589282 1389 + 0.5054
NA PG0076 N-acetylmuramoyl-L-alanine amidase, family 4SubName: Full=N-acetylmuramoyl-L-alanine amidase, family 4; chromosome CDS90482 942 - 0.52017
NA PG0235 carboxyl-terminal proteaseSubName: Full=Carboxyl-terminal protease; chromosome CDS271769 1524 + 0.507874
NA PG0694 immunoreactive 42 kDa antigen PG33RecName: Full=Outer membrane protein 40; Short=Omp40; AltName: Full=PG33; Flags: Precursor; chromosome CDS749793 1143 - 0.444444
NA PG0087 SIS domain proteinSubName: Full=SIS domain protein; chromosome CDS102595 621 - 0.541063
NA PG1277 UDP-glucose-6 dehydrogenase, putativeSubName: Full=UDP-glucose-6 dehydrogenase, putative; chromosome CDS1353894 1266 + 0.420221
NA PG1395 cell shape-determining protein MreC, putativeSubName: Full=Cell shape-determining protein MreC, putative; chromosome CDS1476872 888 - 0.518018
NA PG0139 membrane-bound lytic murein transglycosylase D, putativeSubName: Full=Membrane-bound lytic murein transglycosylase D, putative; chromosome CDS161876 1356 - 0.544248
NA PG1954 NAD dependent epimerase/reductase-related proteinSubName: Full=NAD dependent epimerase/reductase-related protein; chromosome CDS2044653 1020 + 0.519608
NA PG1598 lipoprotein signal peptidase, putativeRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS1678550 681 + 0.474303
NA PG0110 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS132731 1041 + 0.399616
NA PG1048 N-acetylmuramoyl-L-alanine amidase, family 3SubName: Full=N-acetylmuramoyl-L-alanine amidase, family 3; chromosome CDS1115296 1191 + 0.488665
NA PG1042 glycogen synthase, putativeSubName: Full=Glycogen synthase, putative; chromosome CDS1109082 1647 - 0.54827
NA PG1682 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS1768525 1263 + 0.523357
NA PG2095 lipoprotein, putativeSubName: Full=Lipoprotein, putative; chromosome CDS2198380 2328 - 0.508161
NA PG0535 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS586046 621 - 0.470209
NA PG0294 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; chromosome CDS329361 891 - 0.52413
NA PG1346 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS1426848 1272 + 0.506289
NA PG0285 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS318599 1506 + 0.570385
NA PG0191 outer membrane protein, putativeSubName: Full=Outer membrane protein, putative; chromosome CDS226998 2676 + 0.443946
NA PG1565 3-deoxy-D-manno-octulosonic-acid transferase, putativeSubName: Full=3-deoxy-D-manno-octulosonic-acid transferase, putative; chromosome CDS1644711 1239 - 0.505246
NA PG1503 LytB-related proteinSubName: Full=LytB-related protein; chromosome CDS1580365 951 + 0.363828
NA PG1135 bacterial sugar transferaseSubName: Full=Bacterial sugar transferase; chromosome CDS1216000 615 + 0.419512
NA PG0740 NLP/P60 family proteinSubName: Full=NLP/P60 family protein; chromosome CDS787976 570 + 0.5
NA PG0436 capsular polysaccharide transport protein, putativeSubName: Full=Capsular polysaccharide transport protein, putative; chromosome CDS473551 2469 - 0.448765
NA PG0280 ABC transporter, permease protein, putativeSubName: Full=ABC transporter, permease protein, putative; chromosome CDS313387 1329 - 0.515425
NA PG2192 peptidase, M23/M37 familySubName: Full=Peptidase, M23/M37 family; chromosome CDS2298381 1014 + 0.477318
NA PG1966 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2056208 807 - 0.550186
NA PG1097 Mur ligase domain protein/alanine racemaseSubName: Full=Mur ligase domain protein/alanine racemase; chromosome CDS1163097 2472 + 0.474919
NA PG2207 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS2319232 1020 - 0.517647
NA PG2054 lipoprotein PG3SubName: Full=Lipoprotein PG3; chromosome CDS2151433 672 - 0.532738
NA PG1564 membrane protein, putativeSubName: Full=Membrane protein, putative; chromosome CDS1642671 1956 - 0.485174
NA PG1726 PDZ domain proteinSubName: Full=PDZ domain protein; chromosome CDS1815421 1419 + 0.504581
NA PG0065 efflux transporter, RND family, MFP subunitSubName: Full=Efflux transporter, RND family, MFP subunit; chromosome CDS80303 975 - 0.532308
NA PG1051 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1118350 1416 + 0.449153
NA PG0980 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1041037 2238 + 0.51832
NA PG1964 bacterial sugar transferaseSubName: Full=Bacterial sugar transferase; chromosome CDS2053050 1407 + 0.551528
NA PG0106 glycosyl transferase, group 4 family proteinSubName: Full=Glycosyl transferase, group 4 family protein; chromosome CDS128858 1137 + 0.370273
NA PG0119 glycosyl transferase, WecB/TagA/CpsF familySubName: Full=Glycosyl transferase, WecB/TagA/CpsF family; chromosome CDS142440 699 + 0.456366
NA PG1903 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2002320 1992 - 0.520582
NA PG1312 capA protein, putativeSubName: Full=CapA protein, putative; chromosome CDS1390426 1188 + 0.484848
NA PG1060 carboxyl-terminal proteaseSubName: Full=Carboxyl-terminal protease; chromosome CDS1126798 1710 + 0.472515
NA PG0437 polysaccharide export protein, BexD/CtrA/VexA familySubName: Full=Polysaccharide export protein, BexD/CtrA/VexA family; chromosome CDS476044 924 - 0.448052
NA PG1667 outer membrane efflux proteinSubName: Full=Outer membrane efflux protein; chromosome CDS1749685 1368 + 0.531433
NA PG0093 HlyD family secretion proteinSubName: Full=HlyD family secretion protein; chromosome CDS108733 996 - 0.563253
NA PG1149 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS1231782 1128 + 0.410461
NA PG1880 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; chromosome CDS1975621 1011 + 0.48368
NA PG0383 membrane-associated zinc metalloprotease, putativeSubName: Full=Membrane-associated zinc metalloprotease, putative; chromosome CDS414906 1320 + 0.522727
dacB PG1422 D-alanyl-D-alanine carboxypeptidaseSubName: Full=D-alanyl-D-alanine carboxypeptidase; chromosome CDS1507470 1533 - 0.467058
dapA PG2052 dihydrodipicolinate synthaseRecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; chromosome CDS2149776 870 + 0.494253
ddlA PG0729 D-alanine--D-alanine ligaseRecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; chromosome CDS779916 993 - 0.50856
epsC PG0120 UDP-N-acetylglucosamine 2-epimeraseRecName: Full=UDP-N-acetylglucosamine 2-epimerase; EC=5.1.3.14; chromosome CDS143144 1161 + 0.465978
epsD PG0108 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenaseSubName: Full=UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; chromosome CDS130241 1209 + 0.441687
fcl PG1289 GDP-fucose synthetaseRecName: Full=GDP-L-fucose synthase; EC=1.1.1.271; AltName: Full=GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; chromosome CDS1367181 1074 + 0.52514
galE PG0347 UDP-glucose 4-epimeraseSubName: Full=UDP-glucose 4-epimerase; chromosome CDS381414 1029 + 0.532556
gidB PG1307 glucose-inhibited division protein BRecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.-; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; chromosome CDS1387274 666 - 0.503003
gmd PG1288 GDP-mannose 4,6-dehydrataseRecName: Full=GDP-mannose 4,6-dehydratase; EC=4.2.1.47; AltName: Full=GDP-D-mannose dehydratase; chromosome CDS1366103 1086 + 0.533149
ispH PG0604 hydroxymethylbutenyl pyrophosphate reductaseRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS660402 870 + 0.521839
kdsA PG1743 2-dehydro-3-deoxyphosphooctonate aldolaseSubName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; chromosome CDS1827620 819 - 0.566545
kdsB PG1815 3-deoxy-D-manno-octulosonatecytidylyltransferaseRecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase; EC=2.7.7.38; AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid synthase; Short=CKS; Short=CMP-KDO synthase; chromosome CDS1910759 765 - 0.52549
lepA PG1241 GTP-binding protein LepaRecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; chromosome CDS1315753 1788 + 0.506152
lgt PG0805 prolipoprotein diacylglyceryl transferaseRecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; chromosome CDS861889 852 - 0.503521
lpxA PG0070 acyl-(acyl-carrier-protein)-UDP-N- acetylglucosamine acyltransferaseSubName: Full=Acyl-(Acyl-carrier-protein)-UDP-N-acetylglucosamine acyltransferase; chromosome CDS84030 795 - 0.496855
lpxB PG2162 lipid A disaccharide synthaseSubName: Full=Lipid A disaccharide synthase; chromosome CDS2267703 1152 - 0.525174
lpxD PG0072 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferaseRecName: Full=UDP-3-O-acylglucosamine N-acyltransferase; EC=2.3.1.-; chromosome CDS86188 1050 - 0.513333
lpxK PG0638 tetraacyldisaccharide 4'-kinaseRecName: Full=Tetraacyldisaccharide 4-kinase; EC=2.7.1.130; AltName: Full=Lipid A 4-kinase; chromosome CDS690200 1074 - 0.506518
manC PG2215 mannose-1-phosphate guanylyltransferaseSubName: Full=Mannose-1-phosphate guanylyltransferase; chromosome CDS2326700 1086 - 0.533149
mraW PG0573 S-adenosyl-methyltransferase MraWRecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; chromosome CDS628223 936 + 0.518162
mraY PG0577 phospho-N-acetylmuramoyl-pentapeptide-transferaseRecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; chromosome CDS633337 1260 + 0.463492
mscL PG1330 large conductance mechanosensitive channel proteinRecName: Full=Large-conductance mechanosensitive channel; chromosome CDS1409806 420 + 0.483333
murA PG1366 UDP-N-acetylglucosamine1-carboxyvinyltransferaseRecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase; Short=EPT; chromosome CDS1446166 1305 - 0.49272
murB PG1342 UDP-N-acetylenolpyruvoylglucosamine reductaseRecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; chromosome CDS1422725 1017 + 0.489676
murC PG0581 UDP-N-acetylmuramate--alanine ligaseRecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; chromosome CDS638376 1371 + 0.46973
murD PG0578 UDP-N-acetylmuramoylalanine--D-glutamateligaseRecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; chromosome CDS634620 1353 + 0.444198
murE PG0576 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligaseRecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13; AltName: Full=Meso-A2pm-adding enzyme; AltName: Full=Meso-diaminopimelate-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; chromosome CDS631859 1464 + 0.492486
murF PG1106 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligaseRecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; chromosome CDS1177257 1263 - 0.509897
murG PG0580 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferaseRecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; chromosome CDS637237 1140 + 0.489474
murI PG0705 glutamate racemaseRecName: Full=Glutamate racemase; EC=5.1.1.3; chromosome CDS759669 825 + 0.490909
ompH-1 PG0192 cationic outer membrane protein OmpHSubName: Full=Cationic outer membrane protein OmpH; chromosome CDS229730 525 + 0.438095
ompH-2 PG0193 cationic outer membrane protein OmpHSubName: Full=Cationic outer membrane protein OmpH; chromosome CDS230289 492 + 0.443089
porR PG1138 pigmentation and extracellular proteinase regulatorSubName: Full=Pigmentation and extracellular proteinase regulator; chromosome CDS1219684 1155 - 0.447619
rfbA PG1563 glucose-1-phosphate thymidylyltransferaseRecName: Full=Glucose-1-phosphate thymidylyltransferase; EC=2.7.7.24; chromosome CDS1641687 870 - 0.501149
rfbB PG1560 dTDP-glucose 4,6-dehydrataseRecName: Full=dTDP-glucose 4,6-dehydratase; EC=4.2.1.46; chromosome CDS1639157 1065 - 0.50047
rfbC PG1562 dTDP-4-dehydrorhamnose 3,5-epimeraseSubName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; chromosome CDS1641082 591 - 0.465313
rfbD PG1561 dTDP-4-dehydrorhamnose reductaseSubName: Full=dTDP-4-dehydrorhamnose reductase; chromosome CDS1640228 858 - 0.491841
rho PG0332 transcription termination factor RhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS365759 1977 + 0.603945
tagD PG2068 glycerol-3-phosphate cytidylyltransferaseSubName: Full=Glycerol-3-phosphate cytidylyltransferase; chromosome CDS2164474 459 + 0.481481