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2024-05-06 02:53:43

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Porphyromonas gingivalis W83, W83

Number of genes found: 128

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Porphyromonas gingivalis W83, W83
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PG0106 glycosyl transferase, group 4 family proteinchromosome CDS128858 1137 + 0.370273
NA PG1155 ADP-heptose--LPS heptosyltransferase, putativechromosome CDS1236001 891 + 0.484848
NA PG2207 conserved domain proteinchromosome CDS2319232 1020 - 0.517647
NA PG0235 carboxyl-terminal proteasechromosome CDS271769 1524 + 0.507874
NA PG1135 bacterial sugar transferasechromosome CDS1216000 615 + 0.419512
NA PG0139 membrane-bound lytic murein transglycosylase D, putativechromosome CDS161876 1356 - 0.544248
NA PG1503 LytB-related proteinchromosome CDS1580365 951 + 0.363828
NA PG0087 SIS domain proteinchromosome CDS102595 621 - 0.541063
NA PG1149 glycosyl transferase, group 1 family proteinchromosome CDS1231782 1128 + 0.410461
NA PG0160 conserved domain proteinchromosome CDS183273 903 - 0.513843
NA PG0750 glycosyl transferase, group 2 family proteinchromosome CDS796036 747 - 0.453815
NA PG0721 NLP/P60 family proteinchromosome CDS773987 609 + 0.512315
NA PG2095 lipoprotein, putativechromosome CDS2198380 2328 - 0.508161
NA PG1966 conserved hypothetical proteinchromosome CDS2056208 807 - 0.550186
NA PG1598 lipoprotein signal peptidase, putativechromosome CDS1678550 681 + 0.474303
NA PG0740 NLP/P60 family proteinchromosome CDS787976 570 + 0.5
NA PG1345 glycosyl transferase, group 1 family proteinchromosome CDS1425730 1122 + 0.515152
NA PG0063 outer membrane efflux proteinchromosome CDS75968 1179 - 0.523325
NA PG1060 carboxyl-terminal proteasechromosome CDS1126798 1710 + 0.472515
NA PG0794 penicillin-binding protein 1A, putativechromosome CDS846551 2361 + 0.490894
NA PG0283 efflux transporter, MFP component, RND familychromosome CDS317085 1251 - 0.56275
NA PG0383 membrane-associated zinc metalloprotease, putativechromosome CDS414906 1320 + 0.522727
NA PG1666 efflux transporter, MFP component, RND familychromosome CDS1748582 1107 + 0.507678
NA PG0311 glycosyl transferase, group 2 family proteinchromosome CDS345649 954 - 0.497904
NA PG1184 alginate O-acetyltransferase, putativechromosome CDS1265425 1536 - 0.486979
NA PG1798 immunoreactive 46 kDa antigen PG99chromosome CDS1893118 1218 - 0.461412
NA PG2222 acyltransferase, HtrB/MsbB familychromosome CDS2336897 918 + 0.521787
NA PG0785 tonB protein, putativechromosome CDS836990 693 - 0.507937
NA PG2054 lipoprotein PG3chromosome CDS2151433 672 - 0.532738
NA PG0076 N-acetylmuramoyl-L-alanine amidase, family 4chromosome CDS90482 942 - 0.52017
NA PG0575 penicillin-binding protein 2, putativechromosome CDS629641 2202 + 0.522253
NA PG1565 3-deoxy-D-manno-octulosonic-acid transferase, putativechromosome CDS1644711 1239 - 0.505246
NA PG1097 Mur ligase domain protein/alanine racemasechromosome CDS1163097 2472 + 0.474919
NA PG0680 efflux transporter, MFP component, RND familychromosome CDS731108 1254 + 0.561404
NA PG0093 HlyD family secretion proteinchromosome CDS108733 996 - 0.563253
NA PG1667 outer membrane efflux proteinchromosome CDS1749685 1368 + 0.531433
NA PG0119 glycosyl transferase, WecB/TagA/CpsF familychromosome CDS142440 699 + 0.456366
NA PG0539 efflux transporter, MFP component, RND familychromosome CDS590714 1053 + 0.510921
NA PG1179 conserved hypothetical proteinchromosome CDS1260431 792 - 0.492424
NA PG1504 NAD dependent proteinchromosome CDS1581333 987 + 0.344478
NA PG0694 immunoreactive 42 kDa antigen PG33chromosome CDS749793 1143 - 0.444444
NA PG1682 glycosyl transferase, group 1 family proteinchromosome CDS1768525 1263 + 0.523357
NA PG0065 efflux transporter, RND family, MFP subunitchromosome CDS80303 975 - 0.532308
NA PG0191 outer membrane protein, putativechromosome CDS226998 2676 + 0.443946
NA PG1395 cell shape-determining protein MreC, putativechromosome CDS1476872 888 - 0.518018
NA PG0436 capsular polysaccharide transport protein, putativechromosome CDS473551 2469 - 0.448765
NA PG0906 lipoprotein, putativechromosome CDS970756 453 + 0.474614
NA PG0920 glycosyl transferase, group 2 family proteinchromosome CDS980435 681 - 0.483113
NA PG0363 conserved domain proteinchromosome CDS397610 828 + 0.518116
NA PG1346 glycosyl transferase, group 1 family proteinchromosome CDS1426848 1272 + 0.506289
NA PG1522 mandelate racemase/muconate lactonizing enzyme family proteinchromosome CDS1599190 1071 - 0.532213
NA PG1042 glycogen synthase, putativechromosome CDS1109082 1647 - 0.54827
NA PG0280 ABC transporter, permease protein, putativechromosome CDS313387 1329 - 0.515425
NA PG0094 outer membrane efflux protein, putativechromosome CDS109778 1506 - 0.551129
NA PG1620 carboxyl-terminal protease-related proteinchromosome CDS1699505 1077 - 0.494893
NA PG0922 membrane protein, putativechromosome CDS981318 1224 - 0.498366
NA PG1048 N-acetylmuramoyl-L-alanine amidase, family 3chromosome CDS1115296 1191 + 0.488665
NA PG2192 peptidase, M23/M37 familychromosome CDS2298381 1014 + 0.477318
NA PG0679 outer membrane efflux proteinchromosome CDS729734 1335 + 0.594007
NA PG0538 outer membrane efflux proteinchromosome CDS589282 1389 + 0.5054
NA PG0437 polysaccharide export protein, BexD/CtrA/VexA familychromosome CDS476044 924 - 0.448052
NA PG1393 penicillin-binding protein 2, putativechromosome CDS1474496 1866 - 0.540729
NA PG1855 carboxyl-terminal proteasechromosome CDS1953932 1635 - 0.502141
NA PG1051 hypothetical proteinchromosome CDS1118350 1416 + 0.449153
NA PG0334 glycosyl transferase, group 2 family proteinchromosome CDS368882 960 - 0.534375
NA PG0294 glycosyl transferase, group 2 family proteinchromosome CDS329361 891 - 0.52413
NA PG1405 hypothetical proteinchromosome CDS1487904 2856 - 0.482143
NA PG1141 glycosyl transferase, group 1 family proteinchromosome CDS1223131 1194 - 0.417085
NA PG1783 glycosyl transferase, group 2 family proteinchromosome CDS1872008 711 + 0.462729
NA PG1252 membrane protein, putativechromosome CDS1328439 1236 - 0.5
NA PG1964 bacterial sugar transferasechromosome CDS2053050 1407 + 0.551528
NA PG1880 glycosyl transferase, group 2 family proteinchromosome CDS1975621 1011 + 0.48368
NA PG1903 conserved hypothetical proteinchromosome CDS2002320 1992 - 0.520582
NA PG1312 capA protein, putativechromosome CDS1390426 1188 + 0.484848
NA PG1564 membrane protein, putativechromosome CDS1642671 1956 - 0.485174
NA PG0695 immunoreactive 43 kDa antigen PG32chromosome CDS750982 1176 - 0.44983
NA PG0118 glycosyl transferase, group 2 family proteinchromosome CDS141349 1056 + 0.371212
NA PG0129 mannosyltransferasechromosome CDS150725 1125 + 0.575111
NA PG2021 conserved hypothetical proteinchromosome CDS2113011 1932 - 0.495859
NA PG1654 D-alanyl-D-alanine dipeptidasechromosome CDS1736598 624 + 0.535256
NA PG0435 capsular polysaccharide biosythesis protein, putativechromosome CDS472798 744 - 0.448925
NA PG0535 conserved hypothetical proteinchromosome CDS586046 621 - 0.470209
NA PG1726 PDZ domain proteinchromosome CDS1815421 1419 + 0.504581
NA PG1277 UDP-glucose-6 dehydrogenase, putativechromosome CDS1353894 1266 + 0.420221
NA PG1954 NAD dependent epimerase/reductase-related proteinchromosome CDS2044653 1020 + 0.519608
NA PG1235 epimerase/reductase, putativechromosome CDS1310390 957 - 0.481714
NA PG0285 hypothetical proteinchromosome CDS318599 1506 + 0.570385
NA PG0980 hypothetical proteinchromosome CDS1041037 2238 + 0.51832
NA PG0110 glycosyl transferase, group 1 family proteinchromosome CDS132731 1041 + 0.399616
dacB PG1422 D-alanyl-D-alanine carboxypeptidasechromosome CDS1507470 1533 - 0.467058
dapA PG2052 dihydrodipicolinate synthasechromosome CDS2149776 870 + 0.494253
ddlA PG0729 D-alanine--D-alanine ligasechromosome CDS779916 993 - 0.50856
epsC PG0120 UDP-N-acetylglucosamine 2-epimerasechromosome CDS143144 1161 + 0.465978
epsD PG0108 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenasechromosome CDS130241 1209 + 0.441687
fcl PG1289 GDP-fucose synthetasechromosome CDS1367181 1074 + 0.52514
galE PG0347 UDP-glucose 4-epimerasechromosome CDS381414 1029 + 0.532556
gidB PG1307 glucose-inhibited division protein Bchromosome CDS1387274 666 - 0.503003
gmd PG1288 GDP-mannose 4,6-dehydratasechromosome CDS1366103 1086 + 0.533149
ispH PG0604 hydroxymethylbutenyl pyrophosphate reductasechromosome CDS660402 870 + 0.521839
kdsA PG1743 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS1827620 819 - 0.566545
kdsB PG1815 3-deoxy-D-manno-octulosonatecytidylyltransferasechromosome CDS1910759 765 - 0.52549
lepA PG1241 GTP-binding protein Lepachromosome CDS1315753 1788 + 0.506152
lgt PG0805 prolipoprotein diacylglyceryl transferasechromosome CDS861889 852 - 0.503521
lpxA PG0070 acyl-(acyl-carrier-protein)-UDP-N- acetylglucosamine acyltransferasechromosome CDS84030 795 - 0.496855
lpxB PG2162 lipid A disaccharide synthasechromosome CDS2267703 1152 - 0.525174
lpxD PG0072 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS86188 1050 - 0.513333
lpxK PG0638 tetraacyldisaccharide 4'-kinasechromosome CDS690200 1074 - 0.506518
manC PG2215 mannose-1-phosphate guanylyltransferasechromosome CDS2326700 1086 - 0.533149
mraW PG0573 S-adenosyl-methyltransferase MraWchromosome CDS628223 936 + 0.518162
mraY PG0577 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS633337 1260 + 0.463492
mscL PG1330 large conductance mechanosensitive channel proteinchromosome CDS1409806 420 + 0.483333
murA PG1366 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS1446166 1305 - 0.49272
murB PG1342 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS1422725 1017 + 0.489676
murC PG0581 UDP-N-acetylmuramate--alanine ligasechromosome CDS638376 1371 + 0.46973
murD PG0578 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS634620 1353 + 0.444198
murE PG0576 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligasechromosome CDS631859 1464 + 0.492486
murF PG1106 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligasechromosome CDS1177257 1263 - 0.509897
murG PG0580 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS637237 1140 + 0.489474
murI PG0705 glutamate racemasechromosome CDS759669 825 + 0.490909
ompH-1 PG0192 cationic outer membrane protein OmpHchromosome CDS229730 525 + 0.438095
ompH-2 PG0193 cationic outer membrane protein OmpHchromosome CDS230289 492 + 0.443089
porR PG1138 pigmentation and extracellular proteinase regulatorchromosome CDS1219684 1155 - 0.447619
rfbA PG1563 glucose-1-phosphate thymidylyltransferasechromosome CDS1641687 870 - 0.501149
rfbB PG1560 dTDP-glucose 4,6-dehydratasechromosome CDS1639157 1065 - 0.50047
rfbC PG1562 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS1641082 591 - 0.465313
rfbD PG1561 dTDP-4-dehydrorhamnose reductasechromosome CDS1640228 858 - 0.491841
rho PG0332 transcription termination factor Rhochromosome CDS365759 1977 + 0.603945
tagD PG2068 glycerol-3-phosphate cytidylyltransferasechromosome CDS2164474 459 + 0.481481