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Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Synechococcus sp. JA-3-3Ab, JA-3-3Ab

Number of genes found: 115

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Synechococcus sp. JA-3-3Ab, JA-3-3Ab
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA CYA_2181 N-acetylmuramoyl-L-alanine amidaseSubName: Full=N-acetylmuramoyl-L-alanine amidase; EC=3.5.1.28; chromosome CDS2197595 1872 - 0.647436
NA CYA_0577 putative UDP-sulfoquinovose synthaseSubName: Full=Putative UDP-sulfoquinovose synthase; chromosome CDS588838 1152 + 0.58941
NA CYA_0939 penicillin-binding proteinSubName: Full=Penicillin-binding protein; chromosome CDS948786 1980 + 0.657071
NA CYA_1689 dolichyl-phosphate-mannose-proteinmannosyltransferaseSubName: Full=Dolichyl-phosphate-mannose-protein mannosyltransferase; EC=2.4.1.109; chromosome CDS1688040 1692 + 0.646572
NA CYA_0099 glycosyl transferase, group 1SubName: Full=Glycosyl transferase, group 1; EC=2.4.1.-; chromosome CDS95382 1191 + 0.628044
NA CYA_0032 putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidaseSubName: Full=Putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; chromosome CDS30915 1275 + 0.661176
NA CYA_2318 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS2320813 807 + 0.66171
NA CYA_2269 peptidase, M23B familySubName: Full=Peptidase, M23B family; EC=3.4.24.-; chromosome CDS2278032 993 - 0.643505
NA CYA_0208 penicillin-binding protein, 1A familySubName: Full=Penicillin-binding protein, 1A family; chromosome CDS214082 2334 - 0.656812
NA CYA_0239 bacterial sugar transferase family proteinSubName: Full=Bacterial sugar transferase family protein; chromosome CDS241889 1461 + 0.626968
NA CYA_1531 peptidase, M23B familySubName: Full=Peptidase, M23B family; EC=3.4.24.-; chromosome CDS1542429 1023 - 0.640274
NA CYA_2230 quaternary amine uptake ABC transporter (QAT) family, substrate-binding proteinSubName: Full=Quaternary amine uptake ABC transporter (QAT) family, substrate-binding protein; chromosome CDS2245576 900 + 0.638889
NA CYA_0270 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; EC=2.4.1.-; chromosome CDS278035 1059 - 0.595845
NA CYA_0146 glycosyl transferase, WecB/TagA/CpsF familySubName: Full=Glycosyl transferase, WecB/TagA/CpsF family; EC=2.4.1.-; chromosome CDS140472 732 + 0.627049
NA CYA_1038 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS1056280 1908 + 0.602725
NA CYA_0299 fasciclin domain proteinSubName: Full=Fasciclin domain protein; chromosome CDS305550 525 + 0.649524
NA CYA_0554 membrane protein, OMP85 familySubName: Full=Membrane protein, OMP85 family; chromosome CDS567087 1914 - 0.626959
NA CYA_0684 nucleotidyl transferase family proteinSubName: Full=Nucleotidyl transferase family protein; chromosome CDS689690 960 - 0.58125
NA CYA_2187 efflux transporter, RND family, MFP subunitSubName: Full=Efflux transporter, RND family, MFP subunit; chromosome CDS2207155 1356 - 0.668879
NA CYA_0990 heptosyltransferase family proteinSubName: Full=Heptosyltransferase family protein; chromosome CDS1002934 1119 + 0.624665
NA CYA_0484 NAD-dependent epimerase/dehydratase family proteinSubName: Full=NAD-dependent epimerase/dehydratase family protein; chromosome CDS501723 948 - 0.646624
NA CYA_1963 mandelate racemase/muconate lactonizing enzyme family proteinSubName: Full=Mandelate racemase/muconate lactonizing enzyme family protein; chromosome CDS1973893 1050 - 0.62381
NA CYA_0872 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS875992 1479 + 0.631508
NA CYA_1620 efflux transporter, RND family, MFP subunitSubName: Full=Efflux transporter, RND family, MFP subunit; chromosome CDS1623053 1398 + 0.651645
NA CYA_2466 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; EC=2.4.1.-; chromosome CDS2476487 1023 - 0.59042
NA CYA_1991 OmpA family proteinSubName: Full=OmpA family protein; chromosome CDS2010771 822 - 0.628954
NA CYA_2884 rare lipoprotein A family proteinSubName: Full=Rare lipoprotein A family protein; chromosome CDS2901087 1104 + 0.65308
NA CYA_1627 peptidase, M23B familySubName: Full=Peptidase, M23B family; EC=3.4.24.-; chromosome CDS1629793 1179 + 0.639525
NA CYA_2030 TonB family proteinSubName: Full=TonB family protein; chromosome CDS2045348 1320 - 0.681061
NA CYA_1608 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1614729 840 + 0.632143
NA CYA_0435 efflux transporter, RND family, MFP subunitSubName: Full=Efflux transporter, RND family, MFP subunit; chromosome CDS454467 1284 - 0.66433
NA CYA_0913 putative membrane-associated zinc metalloproteaseSubName: Full=Putative membrane-associated zinc metalloprotease; chromosome CDS922065 1101 - 0.631244
NA CYA_2361 NAD-dependent epimerase/dehydratase family proteinSubName: Full=NAD-dependent epimerase/dehydratase family protein; chromosome CDS2368608 957 - 0.62278
NA CYA_0137 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS131558 1590 - 0.631447
NA CYA_0157 transporter, small conductance mechanosensitive ion channel (MscS) familySubName: Full=Transporter, small conductance mechanosensitive ion channel (MscS) family; chromosome CDS154078 765 - 0.645752
NA CYA_0485 UDP-glucose dehydrogenaseSubName: Full=UDP-glucose dehydrogenase; EC=1.1.1.22; chromosome CDS502667 1419 - 0.651163
NA CYA_1245 TonB family proteinSubName: Full=TonB family protein; chromosome CDS1257125 1092 - 0.667582
NA CYA_2702 peptidase, M50 familySubName: Full=Peptidase, M50 family; chromosome CDS2718426 1482 - 0.641026
NA CYA_0026 O-antigen polymerase family proteinSubName: Full=O-antigen polymerase family protein; chromosome CDS24911 1164 - 0.658935
NA CYA_1509 putative inorganic carbon transporter/0-antigen polymerase (ICT/OAP) family proteinSubName: Full=Putative inorganic carbon transporter/0-antigen polymerase (ICT/OAP) family protein; chromosome CDS1517279 1416 - 0.612994
NA CYA_1139 3-beta hydroxysteroid dehydrogenase/isomerase family proteinSubName: Full=3-beta hydroxysteroid dehydrogenase/isomerase family protein; chromosome CDS1163149 660 + 0.572727
NA CYA_2444 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2452833 1314 + 0.660578
NA CYA_0245 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; EC=2.4.1.-; chromosome CDS248588 1446 + 0.637621
NA CYA_1138 CsgG family proteinSubName: Full=CsgG family protein; chromosome CDS1161810 1095 + 0.618265
NA CYA_0623 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; EC=2.4.1.-; chromosome CDS633056 1131 - 0.678161
NA CYA_2851 transporter, small conductance mechanosensitive ion channel (MscS) familySubName: Full=Transporter, small conductance mechanosensitive ion channel (MscS) family; chromosome CDS2866651 1083 - 0.521699
NA CYA_1877 transporter, membrane fusion protein (MFP) familySubName: Full=Transporter, membrane fusion protein (MFP) family; chromosome CDS1880798 1146 + 0.678883
NA CYA_2267 heptosyltransferase family proteinSubName: Full=Heptosyltransferase family protein; chromosome CDS2276671 975 + 0.619487
NA CYA_1879 NAD-dependent epimerase/dehydratase family proteinRecName: Full=GDP-L-fucose synthase; EC=1.1.1.271; AltName: Full=GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; chromosome CDS1884050 954 - 0.626834
NA CYA_0671 D-alanyl-D-alanine carboxypeptidaseSubName: Full=D-alanyl-D-alanine carboxypeptidase; chromosome CDS679854 735 - 0.613605
NA CYA_2050 cellulose synthase, catalytic subunit-like proteinSubName: Full=Cellulose synthase, catalytic subunit-like protein; chromosome CDS2069890 1494 - 0.64324
NA CYA_2534 cyclopropane-fatty-acyl-phospholipid synthaseSubName: Full=Cyclopropane-fatty-acyl-phospholipid synthase; EC=2.1.1.79; chromosome CDS2552549 1140 - 0.601754
NA CYA_1049 NAD-dependent epimerase/dehydratase family proteinSubName: Full=NAD-dependent epimerase/dehydratase family protein; chromosome CDS1067688 957 + 0.579937
NA CYA_0756 dolichyl-phosphate-mannose-proteinmannosyltransferaseSubName: Full=Dolichyl-phosphate-mannose-protein mannosyltransferase; EC=2.4.1.109; chromosome CDS760890 1602 - 0.618602
NA CYA_2016 glycosyl transferase, group 4 family proteinSubName: Full=Glycosyl transferase, group 4 family protein; EC=2.7.8.-; chromosome CDS2032760 1095 + 0.618265
NA CYA_2748 RlpA family protein, truncationSubName: Full=RlpA family protein, truncation; chromosome CDS2767600 363 - 0.586777
NA CYA_1518 outer membrane efflux family proteinSubName: Full=Outer membrane efflux family protein; chromosome CDS1527847 1545 + 0.623948
NA CYA_2563 transporter, small conductance mechanosensitive ion channel (MscS) familySubName: Full=Transporter, small conductance mechanosensitive ion channel (MscS) family; chromosome CDS2585536 1857 - 0.624125
NA CYA_0354 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; EC=2.4.1.-; chromosome CDS372868 1194 - 0.649079
NA CYA_0505 polysaccharide deacetylase family proteinSubName: Full=Polysaccharide deacetylase family protein; chromosome CDS521665 2148 - 0.635009
NA CYA_1154 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; EC=2.4.1.-; chromosome CDS1177432 1122 + 0.64795
NA CYA_0374 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; EC=2.4.1.-; chromosome CDS391400 984 - 0.627033
NA CYA_2856 penicillin-binding protein, 1A familySubName: Full=Penicillin-binding protein, 1A family; chromosome CDS2871556 1983 + 0.644982
NA CYA_1231 nucleotidyl transferase family proteinSubName: Full=Nucleotidyl transferase family protein; chromosome CDS1242268 1122 - 0.595365
NA CYA_1926 transglycosylase, SLT familySubName: Full=Transglycosylase, SLT family; chromosome CDS1938847 2127 + 0.648331
NA CYA_0079 fasciclin domain proteinSubName: Full=Fasciclin domain protein; chromosome CDS77913 537 + 0.575419
NA CYA_1895 peptidase, M23B familySubName: Full=Peptidase, M23B family; chromosome CDS1903557 1593 - 0.65725
NA CYA_0955 glycosyl transferase, group 2SubName: Full=Glycosyl transferase, group 2; chromosome CDS968098 1137 + 0.647318
NA CYA_0107 UDP-N-acetylglucosamine 2-epimeraseRecName: Full=UDP-N-acetylglucosamine 2-epimerase; EC=5.1.3.14; chromosome CDS101922 1128 + 0.625886
NA CYA_2266 DegT/DnrJ/EryC1/StrS aminotransferase family proteinSubName: Full=DegT/DnrJ/EryC1/StrS aminotransferase family protein; chromosome CDS2274972 1161 - 0.61671
NA CYA_2900 peptidase family S41, nonpeptidase-like proteinSubName: Full=Peptidase family S41, nonpeptidase-like protein; chromosome CDS2924669 1572 - 0.622774
NA CYA_1746 peptidase, M50B familySubName: Full=Peptidase, M50B family; EC=3.4.24.-; chromosome CDS1749936 1536 + 0.617839
NA CYA_2559 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; EC=2.4.1.-; chromosome CDS2581836 1404 + 0.611823
NA CYA_0667 nucleotidyl transferase family proteinSubName: Full=Nucleotidyl transferase family protein; chromosome CDS677064 948 - 0.620253
NA CYA_1051 glycosyl transferase, group 1SubName: Full=Glycosyl transferase, group 1; EC=2.4.1.-; chromosome CDS1069764 1134 - 0.64903
NA CYA_2150 fasciclin domain proteinSubName: Full=Fasciclin domain protein; chromosome CDS2162126 486 - 0.619342
NA CYA_0569 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS582703 1827 + 0.629995
NA CYA_0636 fasciclin domain proteinSubName: Full=Fasciclin domain protein; chromosome CDS647772 501 - 0.552894
NA CYA_1072 penicillin-binding proteinSubName: Full=Penicillin-binding protein; chromosome CDS1088473 1746 + 0.629439
alr CYA_1462 alanine racemaseRecName: Full=Alanine racemase; EC=5.1.1.1; chromosome CDS1467548 1290 - 0.65969
dapA CYA_0627 dihydrodipicolinate synthaseRecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; chromosome CDS638904 921 - 0.558089
ddlB CYA_0110 D-alanine--D-alanine ligase BRecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; chromosome CDS105410 972 + 0.646091
dgkA CYA_1623 diacylglycerol kinaseSubName: Full=Diacylglycerol kinase; EC=2.7.1.107; chromosome CDS1626880 495 - 0.628283
galE CYA_2679 UDP-glucose 4-epimeraseSubName: Full=UDP-glucose 4-epimerase; EC=5.1.3.2; chromosome CDS2694862 1011 + 0.643917
gidB CYA_1675 methyltransferase GidBRecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.-; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; chromosome CDS1676217 783 + 0.633461
glmS CYA_1543 glucosamine--fructose-6-phosphate aminotransferase, isomerizingRecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; chromosome CDS1552061 1848 - 0.628247
glmU CYA_1151 UDP-N-acetylglucosamine pyrophosphorylaseRecName: Full=Bifunctional protein GlmU; Includes: RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.7.7.23; AltName: Full=N-acetylglucosamine-1-phosphate uridyltransferase; Includes: RecName: Full=Glucosamine-1-phosphate N-acetyltransferase; EC=2.3.1.157; chromosome CDS1174189 1866 - 0.645766
gmd CYA_1520 GDP-mannose 4,6-dehydrataseRecName: Full=GDP-mannose 4,6-dehydratase; EC=4.2.1.47; AltName: Full=GDP-D-mannose dehydratase; chromosome CDS1530410 1137 - 0.614776
gvpJ CYA_0825 gas vesicle protein JRecName: Full=Gas vesicle structural protein; chromosome CDS838116 333 - 0.582583
ispH CYA_1148 4-hydroxy-3-methylbut-2-enyl diphosphate reductaseRecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; chromosome CDS1171869 1281 - 0.608899
lepA CYA_0582 GTP-binding protein LepARecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; chromosome CDS592866 1812 - 0.58223
lgt-1 CYA_1091 prolipoprotein diacylglyceryl transferaseRecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; chromosome CDS1112486 855 - 0.618713
lgt-2 CYA_2700 prolipoprotein diacylglyceryl transferaseRecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; chromosome CDS2715285 1140 + 0.611404
lnt CYA_2744 apolipoprotein N-acyltransferaseRecName: Full=Apolipoprotein N-acyltransferase; Short=ALP N-acyltransferase; EC=2.3.1.-; chromosome CDS2764603 1617 + 0.630179
lpxA CYA_1960 acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferaseSubName: Full=Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; EC=2.3.1.129; chromosome CDS1970741 912 + 0.626096
lpxB CYA_1961 lipid-A-disaccharide synthetaseSubName: Full=Lipid-A-disaccharide synthetase; EC=2.4.1.182; chromosome CDS1971649 1191 + 0.649034
lpxC CYA_1955 UDP-3-0-acyl N-acetylglucosamine deacetylaseRecName: Full=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; EC=3.5.1.-; AltName: Full=UDP-3-O-acyl-GlcNAc deacetylase; chromosome CDS1965676 912 + 0.633772
lpxD CYA_1015 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferaseRecName: Full=UDP-3-O-acylglucosamine N-acyltransferase; EC=2.3.1.-; chromosome CDS1034023 1032 - 0.619186
lspA CYA_1533 signal peptidase IIRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; chromosome CDS1544448 471 - 0.624204
menC CYA_1249 O-succinylbenzoate synthetaseSubName: Full=O-succinylbenzoate synthetase; EC=4.2.1.-; chromosome CDS1260709 1002 + 0.629741
mraW CYA_2297 S-adenosyl-methyltransferase MraWRecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; chromosome CDS2300104 930 + 0.652688
mraY CYA_1982 phospho-N-acetylmuramoyl-pentapeptide-transferaseRecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; chromosome CDS2002148 1023 + 0.657869
mreC CYA_0369 rod shape-determining proteinSubName: Full=Rod shape-determining protein; chromosome CDS385636 744 + 0.629032
mreD CYA_0370 rod shape-determining protein MreDSubName: Full=Rod shape-determining protein MreD; chromosome CDS386366 630 + 0.62381
mscL CYA_2192 large conductance mechanosensitive channel proteinRecName: Full=Large-conductance mechanosensitive channel; chromosome CDS2211346 399 + 0.471178
murA CYA_1988 UDP-N-acetylglucosamine1-carboxyvinyltransferaseRecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase; chromosome CDS2007472 1446 + 0.627248
murB CYA_1875 UDP-N-acetylenolpyruvoylglucosamine reductaseRecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; chromosome CDS1878066 939 - 0.616613
murC CYA_1876 UDP-N-acetylmuramate--alanine ligaseRecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; chromosome CDS1879001 1533 - 0.61122
murD CYA_0960 UDP-N-acetylmuramoylalanine--D-glutamateligaseRecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; chromosome CDS972527 1410 + 0.641135
murE CYA_0196 UDP-N-acetylmuramyl-tripeptide synthetaseRecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13; AltName: Full=Meso-A2pm-adding enzyme; AltName: Full=Meso-diaminopimelate-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; chromosome CDS194111 1590 + 0.664151
murF CYA_0077 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligaseRecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; chromosome CDS75903 1338 + 0.624813
murG CYA_0847 undecaprenyldiphospho-muramoylpentapeptidebeta-N-acetylglucosaminyltransferaseRecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; chromosome CDS856359 1089 - 0.665748
murI CYA_2180 glutamate racemaseRecName: Full=Glutamate racemase; EC=5.1.1.3; chromosome CDS2196566 879 - 0.659841
prc-1 CYA_1795 C-terminal processing peptidaseSubName: Full=C-terminal processing peptidase; EC=3.4.21.102; chromosome CDS1795708 1314 - 0.642314
prc-2 CYA_2818 C-terminal processing peptidaseSubName: Full=C-terminal processing peptidase; EC=3.4.21.102; chromosome CDS2836589 1296 - 0.618056