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2024-05-01 09:47:56

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Synechococcus sp. JA-3-3Ab, JA-3-3Ab

Number of genes found: 115

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Synechococcus sp. JA-3-3Ab, JA-3-3Ab
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CYA_2748 RlpA family protein, truncationchromosome CDS2767600 363 - 0.586777
NA CYA_0239 bacterial sugar transferase family proteinchromosome CDS241889 1461 + 0.626968
NA CYA_1245 TonB family proteinchromosome CDS1257125 1092 - 0.667582
NA CYA_2900 peptidase family S41, nonpeptidase-like proteinchromosome CDS2924669 1572 - 0.622774
NA CYA_0872 conserved hypothetical proteinchromosome CDS875992 1479 + 0.631508
NA CYA_2016 glycosyl transferase, group 4 family proteinchromosome CDS2032760 1095 + 0.618265
NA CYA_2851 transporter, small conductance mechanosensitive ion channel (MscS) familychromosome CDS2866651 1083 - 0.521699
NA CYA_1991 OmpA family proteinchromosome CDS2010771 822 - 0.628954
NA CYA_2030 TonB family proteinchromosome CDS2045348 1320 - 0.681061
NA CYA_0554 membrane protein, OMP85 familychromosome CDS567087 1914 - 0.626959
NA CYA_2466 glycosyl transferase, group 2 family proteinchromosome CDS2476487 1023 - 0.59042
NA CYA_0435 efflux transporter, RND family, MFP subunitchromosome CDS454467 1284 - 0.66433
NA CYA_1518 outer membrane efflux family proteinchromosome CDS1527847 1545 + 0.623948
NA CYA_1608 conserved hypothetical proteinchromosome CDS1614729 840 + 0.632143
NA CYA_2702 peptidase, M50 familychromosome CDS2718426 1482 - 0.641026
NA CYA_0913 putative membrane-associated zinc metalloproteasechromosome CDS922065 1101 - 0.631244
NA CYA_2563 transporter, small conductance mechanosensitive ion channel (MscS) familychromosome CDS2585536 1857 - 0.624125
NA CYA_1531 peptidase, M23B familychromosome CDS1542429 1023 - 0.640274
NA CYA_2269 peptidase, M23B familychromosome CDS2278032 993 - 0.643505
NA CYA_0099 glycosyl transferase, group 1chromosome CDS95382 1191 + 0.628044
NA CYA_1879 NAD-dependent epimerase/dehydratase family proteinchromosome CDS1884050 954 - 0.626834
NA CYA_2559 glycosyl transferase, group 2 family proteinchromosome CDS2581836 1404 + 0.611823
NA CYA_1038 putative membrane proteinchromosome CDS1056280 1908 + 0.602725
NA CYA_2444 conserved hypothetical proteinchromosome CDS2452833 1314 + 0.660578
NA CYA_0569 conserved domain proteinchromosome CDS582703 1827 + 0.629995
NA CYA_0079 fasciclin domain proteinchromosome CDS77913 537 + 0.575419
NA CYA_2230 quaternary amine uptake ABC transporter (QAT) family, substrate-binding proteinchromosome CDS2245576 900 + 0.638889
NA CYA_2150 fasciclin domain proteinchromosome CDS2162126 486 - 0.619342
NA CYA_1138 CsgG family proteinchromosome CDS1161810 1095 + 0.618265
NA CYA_0026 O-antigen polymerase family proteinchromosome CDS24911 1164 - 0.658935
NA CYA_2266 DegT/DnrJ/EryC1/StrS aminotransferase family proteinchromosome CDS2274972 1161 - 0.61671
NA CYA_2050 cellulose synthase, catalytic subunit-like proteinchromosome CDS2069890 1494 - 0.64324
NA CYA_2318 conserved domain proteinchromosome CDS2320813 807 + 0.66171
NA CYA_0208 penicillin-binding protein, 1A familychromosome CDS214082 2334 - 0.656812
NA CYA_1051 glycosyl transferase, group 1chromosome CDS1069764 1134 - 0.64903
NA CYA_0299 fasciclin domain proteinchromosome CDS305550 525 + 0.649524
NA CYA_0374 glycosyl transferase, group 2 family proteinchromosome CDS391400 984 - 0.627033
NA CYA_1072 penicillin-binding proteinchromosome CDS1088473 1746 + 0.629439
NA CYA_1139 3-beta hydroxysteroid dehydrogenase/isomerase family proteinchromosome CDS1163149 660 + 0.572727
NA CYA_1746 peptidase, M50B familychromosome CDS1749936 1536 + 0.617839
NA CYA_0157 transporter, small conductance mechanosensitive ion channel (MscS) familychromosome CDS154078 765 - 0.645752
NA CYA_1154 glycosyl transferase, group 1 family proteinchromosome CDS1177432 1122 + 0.64795
NA CYA_0684 nucleotidyl transferase family proteinchromosome CDS689690 960 - 0.58125
NA CYA_1895 peptidase, M23B familychromosome CDS1903557 1593 - 0.65725
NA CYA_2856 penicillin-binding protein, 1A familychromosome CDS2871556 1983 + 0.644982
NA CYA_0270 glycosyl transferase, group 1 family proteinchromosome CDS278035 1059 - 0.595845
NA CYA_0505 polysaccharide deacetylase family proteinchromosome CDS521665 2148 - 0.635009
NA CYA_1877 transporter, membrane fusion protein (MFP) familychromosome CDS1880798 1146 + 0.678883
NA CYA_0245 glycosyl transferase, group 2 family proteinchromosome CDS248588 1446 + 0.637621
NA CYA_0990 heptosyltransferase family proteinchromosome CDS1002934 1119 + 0.624665
NA CYA_2181 N-acetylmuramoyl-L-alanine amidasechromosome CDS2197595 1872 - 0.647436
NA CYA_1926 transglycosylase, SLT familychromosome CDS1938847 2127 + 0.648331
NA CYA_1620 efflux transporter, RND family, MFP subunitchromosome CDS1623053 1398 + 0.651645
NA CYA_2267 heptosyltransferase family proteinchromosome CDS2276671 975 + 0.619487
NA CYA_0354 glycosyl transferase, group 1 family proteinchromosome CDS372868 1194 - 0.649079
NA CYA_0671 D-alanyl-D-alanine carboxypeptidasechromosome CDS679854 735 - 0.613605
NA CYA_1049 NAD-dependent epimerase/dehydratase family proteinchromosome CDS1067688 957 + 0.579937
NA CYA_0667 nucleotidyl transferase family proteinchromosome CDS677064 948 - 0.620253
NA CYA_1963 mandelate racemase/muconate lactonizing enzyme family proteinchromosome CDS1973893 1050 - 0.62381
NA CYA_0623 glycosyl transferase, group 2 family proteinchromosome CDS633056 1131 - 0.678161
NA CYA_1689 dolichyl-phosphate-mannose-proteinmannosyltransferasechromosome CDS1688040 1692 + 0.646572
NA CYA_2884 rare lipoprotein A family proteinchromosome CDS2901087 1104 + 0.65308
NA CYA_0636 fasciclin domain proteinchromosome CDS647772 501 - 0.552894
NA CYA_2361 NAD-dependent epimerase/dehydratase family proteinchromosome CDS2368608 957 - 0.62278
NA CYA_0939 penicillin-binding proteinchromosome CDS948786 1980 + 0.657071
NA CYA_2187 efflux transporter, RND family, MFP subunitchromosome CDS2207155 1356 - 0.668879
NA CYA_0955 glycosyl transferase, group 2chromosome CDS968098 1137 + 0.647318
NA CYA_1231 nucleotidyl transferase family proteinchromosome CDS1242268 1122 - 0.595365
NA CYA_0107 UDP-N-acetylglucosamine 2-epimerasechromosome CDS101922 1128 + 0.625886
NA CYA_0032 putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidasechromosome CDS30915 1275 + 0.661176
NA CYA_0484 NAD-dependent epimerase/dehydratase family proteinchromosome CDS501723 948 - 0.646624
NA CYA_0146 glycosyl transferase, WecB/TagA/CpsF familychromosome CDS140472 732 + 0.627049
NA CYA_0756 dolichyl-phosphate-mannose-proteinmannosyltransferasechromosome CDS760890 1602 - 0.618602
NA CYA_0485 UDP-glucose dehydrogenasechromosome CDS502667 1419 - 0.651163
NA CYA_1509 putative inorganic carbon transporter/0-antigen polymerase (ICT/OAP) family proteinchromosome CDS1517279 1416 - 0.612994
NA CYA_2534 cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS2552549 1140 - 0.601754
NA CYA_1627 peptidase, M23B familychromosome CDS1629793 1179 + 0.639525
NA CYA_0577 putative UDP-sulfoquinovose synthasechromosome CDS588838 1152 + 0.58941
NA CYA_0137 putative membrane proteinchromosome CDS131558 1590 - 0.631447
alr CYA_1462 alanine racemasechromosome CDS1467548 1290 - 0.65969
dapA CYA_0627 dihydrodipicolinate synthasechromosome CDS638904 921 - 0.558089
ddlB CYA_0110 D-alanine--D-alanine ligase Bchromosome CDS105410 972 + 0.646091
dgkA CYA_1623 diacylglycerol kinasechromosome CDS1626880 495 - 0.628283
galE CYA_2679 UDP-glucose 4-epimerasechromosome CDS2694862 1011 + 0.643917
gidB CYA_1675 methyltransferase GidBchromosome CDS1676217 783 + 0.633461
glmS CYA_1543 glucosamine--fructose-6-phosphate aminotransferase, isomerizingchromosome CDS1552061 1848 - 0.628247
glmU CYA_1151 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS1174189 1866 - 0.645766
gmd CYA_1520 GDP-mannose 4,6-dehydratasechromosome CDS1530410 1137 - 0.614776
gvpJ CYA_0825 gas vesicle protein Jchromosome CDS838116 333 - 0.582583
ispH CYA_1148 4-hydroxy-3-methylbut-2-enyl diphosphate reductasechromosome CDS1171869 1281 - 0.608899
lepA CYA_0582 GTP-binding protein LepAchromosome CDS592866 1812 - 0.58223
lgt-1 CYA_1091 prolipoprotein diacylglyceryl transferasechromosome CDS1112486 855 - 0.618713
lgt-2 CYA_2700 prolipoprotein diacylglyceryl transferasechromosome CDS2715285 1140 + 0.611404
lnt CYA_2744 apolipoprotein N-acyltransferasechromosome CDS2764603 1617 + 0.630179
lpxA CYA_1960 acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferasechromosome CDS1970741 912 + 0.626096
lpxB CYA_1961 lipid-A-disaccharide synthetasechromosome CDS1971649 1191 + 0.649034
lpxC CYA_1955 UDP-3-0-acyl N-acetylglucosamine deacetylasechromosome CDS1965676 912 + 0.633772
lpxD CYA_1015 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS1034023 1032 - 0.619186
lspA CYA_1533 signal peptidase IIchromosome CDS1544448 471 - 0.624204
menC CYA_1249 O-succinylbenzoate synthetasechromosome CDS1260709 1002 + 0.629741
mraW CYA_2297 S-adenosyl-methyltransferase MraWchromosome CDS2300104 930 + 0.652688
mraY CYA_1982 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS2002148 1023 + 0.657869
mreC CYA_0369 rod shape-determining proteinchromosome CDS385636 744 + 0.629032
mreD CYA_0370 rod shape-determining protein MreDchromosome CDS386366 630 + 0.62381
mscL CYA_2192 large conductance mechanosensitive channel proteinchromosome CDS2211346 399 + 0.471178
murA CYA_1988 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS2007472 1446 + 0.627248
murB CYA_1875 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS1878066 939 - 0.616613
murC CYA_1876 UDP-N-acetylmuramate--alanine ligasechromosome CDS1879001 1533 - 0.61122
murD CYA_0960 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS972527 1410 + 0.641135
murE CYA_0196 UDP-N-acetylmuramyl-tripeptide synthetasechromosome CDS194111 1590 + 0.664151
murF CYA_0077 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligasechromosome CDS75903 1338 + 0.624813
murG CYA_0847 undecaprenyldiphospho-muramoylpentapeptidebeta-N-acetylglucosaminyltransferasechromosome CDS856359 1089 - 0.665748
murI CYA_2180 glutamate racemasechromosome CDS2196566 879 - 0.659841
prc-1 CYA_1795 C-terminal processing peptidasechromosome CDS1795708 1314 - 0.642314
prc-2 CYA_2818 C-terminal processing peptidasechromosome CDS2836589 1296 - 0.618056