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2024-04-27 23:26:43

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Rhodospirillum rubrum ATCC 11170, ATCC 11170

Number of genes found: 199

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rhodospirillum rubrum ATCC 11170, ATCC 11170
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Rru_A3117 Polysaccharide export proteinchromosome CDS3595017 630 - 0.639683
NA Rru_A0123 RfaE-HldE bifunctional protein, D-beta-D-heptose 7-phosphate kinase, D-beta-D-heptose 1-phosphate adenosyltransferasechromosome CDS142472 1491 - 0.687458
NA Rru_A2153 TonB-likechromosome CDS2501387 831 - 0.705175
NA Rru_A1798 Type I secretion outer membrane protein, TolCchromosome CDS2091636 1617 - 0.652443
NA Rru_A0151 hypothetical proteinchromosome CDS175739 744 + 0.686828
NA Rru_A0770 Peptidase M23Bchromosome CDS908584 1602 - 0.661673
NA Rru_A1597 Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferasechromosome CDS1881624 798 + 0.642857
NA Rru_A3721 sugar transferasechromosome CDS4271848 1089 + 0.649219
NA Rru_A1660 Peptidase M23Bchromosome CDS1952389 1047 + 0.678128
NA Rru_A0058 Dihydrokaempferol 4-reductasechromosome CDS64954 1002 - 0.673653
NA Rru_A2209 AsmAchromosome CDS2564644 3234 - 0.680891
NA Rru_A3716 Polysaccharide export proteinchromosome CDS4266649 726 + 0.683196
NA Rru_A3626 Glucose inhibited division proteinchromosome CDS4166725 606 + 0.636964
NA Rru_A2923 conserved hypothetical proteinchromosome CDS3365295 1194 + 0.690117
NA Rru_A0064 squalene-phytoene synthasechromosome CDS72940 2064 - 0.689922
NA Rru_A2492 Glycosyl transferase, group 1chromosome CDS2898018 1116 - 0.689068
NA Rru_A1486 UDP-glucose 4-epimerasechromosome CDS1754891 966 - 0.707039
NA Rru_A0725 Cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS853113 1284 + 0.661994
NA Rru_A2147 Penicillin-binding protein 1Achromosome CDS2491117 2496 - 0.653045
NA Rru_A1372 hypothetical proteinchromosome CDS1615127 855 - 0.694737
NA Rru_A2556 Mandelate racemase/muconate lactonizing enzymechromosome CDS2972623 1002 - 0.697605
NA Rru_A0641 Prolipoprotein diacylglyceryl transferasechromosome CDS762801 825 + 0.658182
NA Rru_A2737 Glycosyl transferase, family 2chromosome CDS3166462 1449 - 0.68599
NA Rru_A1195 Cell wall hydrolase, SleBchromosome CDS1411873 663 + 0.662142
NA Rru_A2493 Glycosyl transferase, group 1chromosome CDS2899130 1062 - 0.684557
NA Rru_A2740 UDP-N-acetylglucosamine 2-epimerasechromosome CDS3171985 1098 - 0.656648
NA Rru_A0953 Phospho-N-acetylmuramoyl-pentapeptidetransferasechromosome CDS1137369 1083 - 0.637119
NA Rru_A2741 Polysaccharide biosynthesis protein CapDchromosome CDS3173079 1068 - 0.636704
NA Rru_A3658 Glycosyl transferase, group 1chromosome CDS4199096 1161 - 0.70112
NA Rru_A3436 Nucleotidyl transferasechromosome CDS3958953 762 - 0.66273
NA Rru_A2427 LrgB-like proteinchromosome CDS2827107 726 + 0.662534
NA Rru_A1793 Secretion protein HlyDchromosome CDS2085290 1044 - 0.653257
NA Rru_A0253 GDP-mannose 4,6-dehydratasechromosome CDS314880 1071 + 0.613445
NA Rru_A3715 Lipopolysaccharide biosynthesischromosome CDS4264520 2139 + 0.595605
NA Rru_A0504 Peptidase M23Bchromosome CDS593863 1260 + 0.695238
NA Rru_A3365 Small GTP-binding protein domainchromosome CDS3878399 1866 + 0.628081
NA Rru_A3072 MscS Mechanosensitive ion channelchromosome CDS3536238 2322 + 0.665375
NA Rru_A3375 Glycosyl transferase, family 9chromosome CDS3891056 954 - 0.686583
NA Rru_A1117 Secretion protein HlyDchromosome CDS1312016 1104 + 0.647645
NA Rru_A3118 Lipopolysaccharide biosynthesischromosome CDS3595958 1599 + 0.637899
NA Rru_A3698 Outer membrane lipoprotein carrier protein LolAchromosome CDS4244658 666 - 0.638138
NA Rru_A0269 hypothetical proteinchromosome CDS334588 882 + 0.692744
NA Rru_A2939 hypothetical proteinchromosome CDS3387480 1056 - 0.723485
NA Rru_A2746 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS3178704 1191 - 0.673384
NA Rru_A0471 Rod shape-determining protein MreC, subtypechromosome CDS553019 858 + 0.651515
NA Rru_A2052 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS2374586 1500 + 0.653333
NA Rru_A3762 Peptidase M15D, vanX D-ala-D-ala dipeptidasechromosome CDS4313290 573 + 0.649215
NA Rru_A2926 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS3368729 1419 - 0.68358
NA Rru_A2548 hypothetical proteinchromosome CDS2963848 909 + 0.685369
NA Rru_A3080 hypothetical proteinchromosome CDS3545804 1197 + 0.725146
NA Rru_A0127 ABC-2 transporter componentchromosome CDS147763 849 + 0.628975
NA Rru_A2938 Glycosyl transferase, group 1chromosome CDS3386352 1056 - 0.673295
NA Rru_A2850 hypothetical proteinchromosome CDS3280222 330 + 0.633333
NA Rru_A2407 GCN5-related N-acetyltransferasechromosome CDS2806336 588 + 0.680272
NA Rru_A1599 Lipid-A-disaccharide synthasechromosome CDS1883290 1224 + 0.662582
NA Rru_A1005 Glycosyl transferase, family 2chromosome CDS1191973 1035 + 0.623188
NA Rru_A2113 Serine-type D-Ala-D-Ala carboxypeptidasechromosome CDS2451696 1407 + 0.675195
NA Rru_A1595 Outer membrane chaperone Skp (OmpH)chromosome CDS1880333 597 + 0.621441
NA Rru_A2095 Secretion protein HlyDchromosome CDS2424229 1065 - 0.703286
NA Rru_A3393 Penicillin-binding protein 1Achromosome CDS3910206 1956 + 0.691718
NA Rru_A3385 OmpA/MotBchromosome CDS3902293 729 + 0.707819
NA Rru_A1493 UDP-N-acetylglucosamine 2-epimerasechromosome CDS1763172 1155 - 0.687446
NA Rru_A3378 conserved hypothetical proteinchromosome CDS3894226 927 - 0.668824
NA Rru_A0583 Glycosyl transferase, group 1chromosome CDS692316 1287 + 0.685315
NA Rru_A2749 Protein of unknown function DUF214chromosome CDS3181677 1230 - 0.682927
NA Rru_A1578 Lipoprotein releasing system, transmembrane protein, LolC/E familychromosome CDS1858803 1254 + 0.639553
NA Rru_A0220 conserved hypothetical proteinchromosome CDS271583 477 - 0.591195
NA Rru_A3342 Dihydrodipicolinate synthase subfamilychromosome CDS3854287 879 + 0.492605
NA Rru_A0254 NAD-dependent epimerase/dehydratasechromosome CDS315943 990 + 0.655556
NA Rru_A0948 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS1131189 960 - 0.71875
NA Rru_A0943 UDP-3-0-acyl N-acetylglucosamine deacetylasechromosome CDS1124295 1044 - 0.66954
NA Rru_A0955 UDP-N-acetylmuramyl-tripeptide synthetasechromosome CDS1139948 1482 - 0.716599
NA Rru_A1608 MscS Mechanosensitive ion channelchromosome CDS1901090 2607 + 0.667817
NA Rru_A2117 UTP--glucose-1-phosphate uridylyltransferasechromosome CDS2457523 879 - 0.632537
NA Rru_A2494 Glycosyl transferase, family 2chromosome CDS2900277 969 - 0.663571
NA Rru_A3131 Secretion protein HlyDchromosome CDS3609912 1035 - 0.695652
NA Rru_A1482 Undecaprenyl-phosphategalactosephosphotransferasechromosome CDS1748483 1359 + 0.668138
NA Rru_A1910 Cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS2214789 1263 + 0.649248
NA Rru_A0935 NAD-dependent epimerase/dehydratasechromosome CDS1114135 867 + 0.547866
NA Rru_A3105 glycosyl transferases group 1chromosome CDS3575460 1200 + 0.681667
NA Rru_A3102 sugar transferasechromosome CDS3570541 1452 + 0.580579
NA Rru_A3108 NAD-dependent epimerase/dehydratasechromosome CDS3578642 987 + 0.677812
NA Rru_A0059 4-hydroxy-3-methylbut-2-enyl diphosphate reductasechromosome CDS66362 1011 + 0.659743
NA Rru_A2334 nucleoside-diphosphate-sugar epimerasechromosome CDS2703329 939 - 0.612354
NA Rru_A2125 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-likechromosome CDS2466930 1656 - 0.600242
NA Rru_A2632 Peptidoglycan-binding domain 1chromosome CDS3061203 351 - 0.703704
NA Rru_A1705 Rare lipoprotein Achromosome CDS1995660 1104 - 0.692029
NA Rru_A0582 Tetraacyldisaccharide 4'-kinasechromosome CDS691305 996 + 0.698795
NA Rru_A2928 Secretion protein HlyDchromosome CDS3373350 1044 - 0.668582
NA Rru_A0950 N-acetylglucosaminyltransferase, MurGchromosome CDS1133587 1164 - 0.724227
NA Rru_A2230 Glycosyl transferase, family 9chromosome CDS2589471 993 + 0.712991
NA Rru_A3204 C-terminal processing peptidasechromosome CDS3695033 1701 + 0.677837
NA Rru_A0952 UDP-N-acetylmuramoylalanine-D-glutamate ligasechromosome CDS1135925 1434 - 0.700837
NA Rru_A2967 Peptidase A8, signal peptidase IIchromosome CDS3418623 483 + 0.648033
NA Rru_A0933 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS1111161 1131 + 0.643678
NA Rru_A3091 Glycosyl transferase, group 1chromosome CDS3554585 2313 - 0.680069
NA Rru_A1865 Dihydrodipicolinate synthase subfamilychromosome CDS2161583 882 - 0.663265
NA Rru_A0027 Monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS31626 708 + 0.679379
NA Rru_A0925 Glycosyl transferase, group 1chromosome CDS1099736 2286 + 0.665792
NA Rru_A0947 D-alanine--D-alanine ligasechromosome CDS1130284 909 - 0.668867
NA Rru_A0938 Glycosyl transferase, family 2chromosome CDS1117496 954 - 0.615304
NA Rru_A3094 O-antigen polymerasechromosome CDS3559919 1335 - 0.645693
NA Rru_A3096 Glycosyl transferase, group 1chromosome CDS3563053 1320 + 0.687121
NA Rru_A1767 peptidase M23Bchromosome CDS2059422 1398 - 0.707439
NA Rru_A1511 Glycosyl transferase, family 2chromosome CDS1784681 1080 + 0.661111
NA Rru_A3607 murein degrading transglycosylase proteinchromosome CDS4147125 1197 - 0.698413
NA Rru_A0870 OmpA/MotBchromosome CDS1041568 663 - 0.618401
NA Rru_A0409 Alanine racemase regionchromosome CDS485980 1125 - 0.670222
NA Rru_A1704 Serine-type D-Ala-D-Ala carboxypeptidasechromosome CDS1994316 1167 - 0.62982
NA Rru_A2124 Glycosyl transferase, family 2chromosome CDS2465829 1023 - 0.607038
NA Rru_A0958 methyltransferasechromosome CDS1143679 981 - 0.69419
NA Rru_A1484 Glycosyl transferase WecB/TagA/CpsFchromosome CDS1751716 1725 - 0.693333
NA Rru_A1487 Polysaccharide export proteinchromosome CDS1755894 582 - 0.652921
NA Rru_A2738 Glycosyl transferase, group 1chromosome CDS3167907 1623 - 0.655576
NA Rru_A0177 Lytic transglycosylase, catalyticchromosome CDS210683 363 - 0.669421
NA Rru_A2735 hypothetical proteinchromosome CDS3163221 633 + 0.598736
NA Rru_A3717 Glycosyl transferase WecB/TagA/CpsFchromosome CDS4267371 786 + 0.685751
NA Rru_A3576 UDP-glucuronate 5'-epimerasechromosome CDS4120599 1008 + 0.62996
NA Rru_A3107 Glycosyl transferase, group 1chromosome CDS3577151 1428 + 0.661765
NA Rru_A0055 VacJ-like lipoproteinchromosome CDS60139 873 - 0.630011
NA Rru_A2211 Porin, Gram-negative typechromosome CDS2568810 1089 - 0.621671
NA Rru_A0579 Glycosyl transferase, group 1chromosome CDS688229 1074 + 0.659218
NA Rru_A3252 dTDP-glucose 4,6-dehydratasechromosome CDS3748117 945 - 0.619048
NA Rru_A3074 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-likechromosome CDS3539235 1542 - 0.707523
NA Rru_A0434 Organic solvent tolerance protein OstA-likechromosome CDS506452 2661 - 0.643367
NA Rru_A2116 UDP-glucose 6-dehydrogenasechromosome CDS2456149 1317 - 0.638573
NA Rru_A2121 hypothetical proteinchromosome CDS2462962 1197 + 0.677527
NA Rru_A1095 OmpA/MotBchromosome CDS1284456 486 + 0.67284
NA Rru_A1367 Sugar isomerase (SIS)chromosome CDS1608728 558 - 0.684588
NA Rru_A3237 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS3733988 1386 + 0.710678
NA Rru_A0949 UDP-N-acetylmuramate--alanine ligasechromosome CDS1132145 1446 - 0.66805
NA Rru_A0473 Peptidoglycan glycosyltransferasechromosome CDS554626 2046 + 0.678886
NA Rru_A3774 Apolipoprotein N-acyltransferasechromosome CDS4322205 1596 + 0.696742
NA Rru_A1706 Lytic murein transglycosylasechromosome CDS1996760 1365 - 0.711355
NA Rru_A2592 hypothetical proteinchromosome CDS3012477 696 + 0.699713
NA Rru_A3278 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS3776040 984 - 0.652439
NA Rru_A1490 Protein-tyrosine kinasechromosome CDS1758883 2205 + 0.651701
NA Rru_A3376 Glycosyl transferase, group 1chromosome CDS3892023 1299 - 0.688222
NA Rru_A3163 3-deoxy-D-manno-octulosonatecytidylyltransferasechromosome CDS3654705 801 - 0.68789
NA Rru_A2099 surface antigenchromosome CDS2432688 1899 - 0.678778
NA Rru_A2066 Dihydrodipicolinate synthetasechromosome CDS2389661 915 + 0.661202
NA Rru_A1866 Lytic transglycosylase, catalyticchromosome CDS2162763 1995 + 0.690226
NA Rru_A0133 Glycosyl transferase, group 1chromosome CDS156027 1035 + 0.663768
NA Rru_A3700 Secretion protein HlyDchromosome CDS4248630 1146 - 0.681501
NA Rru_A0956 Peptidoglycan glycosyltransferasechromosome CDS1141416 1800 - 0.655556
NA Rru_A1671 hypothetical proteinchromosome CDS1961364 1146 + 0.705934
NA Rru_A2657 AsmAchromosome CDS3084978 2214 - 0.690154
NA Rru_A3235 Secretion protein HlyDchromosome CDS3730807 1176 + 0.680272
NA Rru_A1075 hypothetical proteinchromosome CDS1266121 1506 - 0.733732
NA Rru_A2114 O-antigen polymerasechromosome CDS2453128 1275 - 0.698824
NA Rru_A1594 surface antigen D15chromosome CDS1877971 2358 + 0.619593
NA Rru_A2212 hypothetical proteinchromosome CDS2570100 1047 - 0.625597
NA Rru_A3125 Glycosyl transferase, group 1chromosome CDS3603996 1221 - 0.697789
NA Rru_A2520 Penicillin-binding protein 1Achromosome CDS2929751 2253 + 0.708389
NA Rru_A3090 Glycosyl transferase, family 2chromosome CDS3553656 933 - 0.705252
NA Rru_A1867 Protein of unknown function DUF583chromosome CDS2164886 480 - 0.65625
NA Rru_A1025 Rare lipoprotein Achromosome CDS1213848 609 + 0.679803
NA Rru_A0229 Glycosyl transferase, group 1chromosome CDS281044 1431 - 0.710692
NA Rru_A0860 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS1025255 1473 - 0.691785
NA Rru_A3657 Glycosyl transferase, family 4chromosome CDS4198021 1014 - 0.714004
NA Rru_A1980 Protein of unknown function DUF1022chromosome CDS2291703 1005 + 0.697512
NA Rru_A0437 OmpA family proteinchromosome CDS512107 1023 - 0.630499
NA Rru_A2412 OmpA/MotBchromosome CDS2812858 1044 - 0.712644
NA Rru_A3215 hypothetical proteinchromosome CDS3707518 402 + 0.68408
NA Rru_A3029 Glucosamine-fructose-6-phosphate aminotransferase, isomerisingchromosome CDS3486947 1824 - 0.657346
NA Rru_A2050 Secretion protein HlyDchromosome CDS2370148 1281 + 0.669009
NA Rru_A2381 lipocalin-like proteinchromosome CDS2773269 606 - 0.646865
NA Rru_A0472 hypothetical proteinchromosome CDS554069 555 + 0.643243
NA Rru_A1886 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS2184907 843 - 0.652432
NA Rru_A1232 C-terminal processing peptidase S41Achromosome CDS1454447 1323 - 0.632653
NA Rru_A2231 Glycosyl transferase, family 25chromosome CDS2590454 768 - 0.643229
NA Rru_A2385 Substrate-binding region of ABC-type glycine betaine transport systemchromosome CDS2776995 915 - 0.643716
NA Rru_A0096 Secretion protein HlyDchromosome CDS110136 966 - 0.699793
NA Rru_A2133 glycosyl transferase, group 2 family proteinchromosome CDS2477446 2043 - 0.675477
NA Rru_A0954 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligasechromosome CDS1138485 1467 - 0.702113
NA Rru_A0016 3-beta-hydroxy-delta(5)-steroid dehydrogenasechromosome CDS17356 1023 + 0.673509
NA Rru_A2750 Secretion protein HlyDchromosome CDS3182911 1200 - 0.730833
NA Rru_A0105 Penicillin-binding protein 1Cchromosome CDS123031 2121 + 0.729373
NA Rru_A3408 Glycosyl transferase, family 2chromosome CDS3925222 1059 - 0.707271
NA Rru_A2931 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS3376464 1278 - 0.676056
NA Rru_A0946 Cell division protein FtsQchromosome CDS1129301 996 - 0.73996
NA Rru_A0132 Peptidase S13, D-Ala-D-Ala carboxypeptidase Cchromosome CDS154209 1587 - 0.696912
NA Rru_A0887 Secretion protein HlyDchromosome CDS1064008 1197 - 0.68254
NA Rru_A1593 Peptidase M50, putative membrane-associated zinc metallopeptidasechromosome CDS1876785 1104 + 0.63587
NA Rru_A1496 Glycosyl transferase, group 1chromosome CDS1767087 1020 + 0.716667
NA Rru_A3328 OmpA/MotBchromosome CDS3839556 822 - 0.658151
NA Rru_A1868 Peptidase M23Bchromosome CDS2165349 1383 - 0.639913
NA Rru_A2739 hypothetical proteinchromosome CDS3169526 2463 - 0.703613
NA Rru_A2734 dTDP-4-dehydrorhamnose reductasechromosome CDS3162319 906 + 0.689846
NA Rru_A3347 Glycosyl transferase, group 1chromosome CDS3861157 1203 + 0.654198
NA Rru_A0043 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxDchromosome CDS45342 1170 + 0.675214
NA Rru_A3656 Polysaccharide biosynthesis protein CapDchromosome CDS4196060 1959 - 0.685554
NA Rru_A2495 Glycosyl transferase, family 2chromosome CDS2901242 978 - 0.700409
NA Rru_A3030 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS3488824 1431 - 0.691125
NA Rru_A3659 hypothetical proteinchromosome CDS4200253 1605 - 0.699688
NA Rru_A0267 Lytic transglycosylase, catalyticchromosome CDS331970 1725 + 0.695072
NA Rru_A2345 Glycosyl transferase, group 1chromosome CDS2718667 1032 - 0.660853
NA Rru_A0581 Three-deoxy-D-manno-octulosonic-acidtransferase-likechromosome CDS690002 1317 + 0.697039
NA Rru_A2148 N-acetylmuramoyl-L-alanine amidasechromosome CDS2493887 1569 - 0.68515