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2024-05-07 16:28:42

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Thiomicrospira denitrificans ATCC 33889, ATCC 33889

Number of genes found: 140

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thiomicrospira denitrificans ATCC 33889, ATCC 33889
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Tmden_0582 Lipopolysaccharide heptosyltransferase IIchromosome CDS589904 978 - 0.376278
NA Tmden_1702 Glycosyl transferase, group 1chromosome CDS1782433 1083 - 0.291782
NA Tmden_1473 UTP--glucose-1-phosphate uridylyltransferasechromosome CDS1545207 840 - 0.361905
NA Tmden_1554 Glutamate racemasechromosome CDS1626442 744 + 0.356183
NA Tmden_0383 Glucose inhibited division proteinchromosome CDS385030 582 - 0.33677
NA Tmden_1892 Penicillin-binding protein 1Achromosome CDS1972411 1968 - 0.365854
NA Tmden_1208 D-alanine--D-alanine ligasechromosome CDS1273978 1038 - 0.346821
NA Tmden_1206 Cytoplasmic peptidoglycan synthetases-likechromosome CDS1271796 1446 - 0.324343
NA Tmden_0401 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS399171 792 + 0.369949
NA Tmden_0580 RfaE bifunctional protein, domains I and IIchromosome CDS587895 1434 + 0.366109
NA Tmden_1577 Apolipoprotein N-acyltransferasechromosome CDS1652608 1239 + 0.325262
NA Tmden_1082 Lytic transglycosylase, catalyticchromosome CDS1141874 1140 - 0.307895
NA Tmden_1021 MscS Mechanosensitive ion channelchromosome CDS1074900 1647 + 0.313904
NA Tmden_0318 diacylglycerol kinasechromosome CDS321199 360 - 0.327778
NA Tmden_1882 hypothetical proteinchromosome CDS1961895 1191 - 0.371117
NA Tmden_0597 UDP-N-acetylglucosamine 2-epimerasechromosome CDS604855 1164 + 0.341065
NA Tmden_0599 Acylneuraminate cytidylyltransferasechromosome CDS607067 717 + 0.313808
NA Tmden_1044 Protein of unknown function DUF214chromosome CDS1105321 1203 + 0.343308
NA Tmden_2074 Membrane-bound lytic murein transglycosylase B-likechromosome CDS2163545 987 + 0.326241
NA Tmden_1285 MltAchromosome CDS1357013 1161 - 0.33764
NA Tmden_1705 Outer membrane efflux proteinchromosome CDS1785468 1311 - 0.333333
NA Tmden_1544 TonB-likechromosome CDS1614925 747 + 0.373494
NA Tmden_1362 Secretion protein HlyDchromosome CDS1433988 1146 + 0.363874
NA Tmden_1483 Glucosamine-fructose-6-phosphate aminotransferase, isomerisingchromosome CDS1556258 1815 + 0.364187
NA Tmden_0852 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS880384 1122 + 0.354724
NA Tmden_1234 Peptidase M50, putative membrane-associated zinc metallopeptidasechromosome CDS1300501 1053 + 0.379867
NA Tmden_0175 Nucleotidyl transferasechromosome CDS178232 705 - 0.323404
NA Tmden_1419 Glycosyl transferase, group 1chromosome CDS1483211 1098 - 0.333333
NA Tmden_1466 putative periplasmic proteinchromosome CDS1537230 762 + 0.314961
NA Tmden_1703 NAD-dependent epimerase/dehydratasechromosome CDS1783541 879 - 0.32537
NA Tmden_1706 Type I secretion membrane fusion protein, HlyDchromosome CDS1786768 1296 - 0.345679
NA Tmden_1417 Glycosyl transferase, group 1chromosome CDS1480928 1227 - 0.279544
NA Tmden_1361 Outer membrane efflux proteinchromosome CDS1432741 1251 + 0.370104
NA Tmden_0589 Lipopolysaccharide heptosyltransferase Ichromosome CDS596531 981 - 0.342508
NA Tmden_1136 surface antigen (D15)chromosome CDS1190923 1695 - 0.315044
NA Tmden_1463 Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferasechromosome CDS1534164 786 + 0.385496
NA Tmden_0201 hypothetical proteinchromosome CDS205276 2115 - 0.300709
NA Tmden_1733 Glycosyl transferase, group 1chromosome CDS1817822 1155 - 0.315152
NA Tmden_0928 Calcium-binding EF-handchromosome CDS965616 1296 + 0.37963
NA Tmden_0047 MscS Mechanosensitive ion channelchromosome CDS54842 813 - 0.314883
NA Tmden_0379 Alanine racemasechromosome CDS381357 1017 + 0.369715
NA Tmden_0595 N-acetylneuraminate synthasechromosome CDS602979 1002 + 0.348303
NA Tmden_0187 Glycosyl transferase, group 1chromosome CDS189941 1131 - 0.329797
NA Tmden_1704 GDP-mannose 4,6-dehydratasechromosome CDS1784423 1035 - 0.377778
NA Tmden_1568 Peptidase M23Bchromosome CDS1642609 954 - 0.357442
NA Tmden_0902 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS935148 1092 - 0.362637
NA Tmden_0091 NLP/P60chromosome CDS98700 513 + 0.339181
NA Tmden_1220 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-likechromosome CDS1286587 1473 + 0.304141
NA Tmden_0271 TonB-likechromosome CDS287901 702 - 0.304843
NA Tmden_0671 Peptidase M23Bchromosome CDS685089 1296 + 0.330247
NA Tmden_1283 VacJ-like lipoproteinchromosome CDS1355658 780 - 0.338462
NA Tmden_0362 Peptidoglycan glycosyltransferasechromosome CDS363335 1788 - 0.346197
NA Tmden_0426 organic solvent tolerance protein, putativechromosome CDS426788 2217 + 0.316644
NA Tmden_0752 Glycosyl transferase, family 2chromosome CDS779706 1302 + 0.384793
NA Tmden_1800 Lytic transglycosylase, catalyticchromosome CDS1881550 606 - 0.316832
NA Tmden_0757 UDP-N-acetylmuramate--alanine ligasechromosome CDS785176 1314 - 0.366058
NA Tmden_1442 Outer membrane efflux proteinchromosome CDS1510677 1227 - 0.345558
NA Tmden_0108 MscS Mechanosensitive ion channelchromosome CDS114848 876 - 0.325342
NA Tmden_0727 3-deoxy-D-manno-octulosonatecytidylyltransferasechromosome CDS749688 717 - 0.35007
NA Tmden_1423 UDP-glucose/GDP-mannose dehydrogenasechromosome CDS1487152 1266 - 0.330174
NA Tmden_0672 UDP-3-0-acyl N-acetylglucosamine deacetylasechromosome CDS686417 885 + 0.338983
NA Tmden_1004 TonB-likechromosome CDS1053854 720 + 0.3625
NA Tmden_0446 Three-deoxy-D-manno-octulosonic-acidtransferase-likechromosome CDS446087 1128 + 0.335993
NA Tmden_1014 UDP-N-acetylglucosamine diphosphorylasechromosome CDS1067454 1305 - 0.353257
NA Tmden_0660 surface antigen (D15)chromosome CDS673702 2268 + 0.347884
NA Tmden_0179 NAD-dependent epimerase/dehydratasechromosome CDS181752 990 - 0.351515
NA Tmden_1397 OmpA/MotBchromosome CDS1465567 531 - 0.369115
NA Tmden_0319 Sulfatasechromosome CDS321555 1941 - 0.343122
NA Tmden_0556 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS561437 1269 - 0.378251
NA Tmden_0797 methyltransferasechromosome CDS826014 924 + 0.350649
NA Tmden_1729 Glycosyl transferase, group 1chromosome CDS1812176 2517 - 0.362733
NA Tmden_1256 conserved hypothetical proteinchromosome CDS1325041 798 - 0.295739
NA Tmden_0320 Sulfatasechromosome CDS323665 1923 + 0.326573
NA Tmden_1195 Outer membrane efflux proteinchromosome CDS1254728 2775 + 0.316757
NA Tmden_0593 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS601256 1152 + 0.342014
NA Tmden_1138 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxDchromosome CDS1192855 957 - 0.368861
NA Tmden_1191 Type I secretion membrane fusion protein, HlyDchromosome CDS1250540 1275 + 0.333333
NA Tmden_1739 MscS Mechanosensitive ion channelchromosome CDS1824960 1188 - 0.338384
NA Tmden_0442 Peptidase M23Bchromosome CDS443124 858 + 0.340326
NA Tmden_1699 O-antigen polymerasechromosome CDS1778824 1206 - 0.327529
NA Tmden_1968 UDP-glucose 6-dehydrogenasechromosome CDS2050536 1170 - 0.364957
NA Tmden_2073 Nucleotidyl transferasechromosome CDS2162677 663 + 0.375566
NA Tmden_2040 Outer membrane efflux proteinchromosome CDS2126291 1236 + 0.34466
NA Tmden_0535 Secretion protein HlyDchromosome CDS534359 1101 + 0.35604
NA Tmden_1676 lipid A biosynthesis acyltransferasechromosome CDS1759022 891 + 0.312009
NA Tmden_2052 hypothetical proteinchromosome CDS2137808 1014 - 0.335306
NA Tmden_1690 MscS Mechanosensitive ion channelchromosome CDS1769535 1431 + 0.310273
NA Tmden_0370 Peptidase M23Bchromosome CDS369899 1209 - 0.336642
NA Tmden_0722 N-acetylmuramoyl-L-alanine amidasechromosome CDS744016 1410 + 0.337589
NA Tmden_2018 OmpA/MotBchromosome CDS2101331 1047 + 0.355301
NA Tmden_0882 cation efflux system proteinchromosome CDS912328 963 + 0.333333
NA Tmden_1042 Outer membrane lipoprotein carrier protein LolAchromosome CDS1102059 516 - 0.30814
NA Tmden_1807 N-acetylglucosaminyltransferase, MurGchromosome CDS1886670 1023 - 0.385142
NA Tmden_1095 NLP/P60chromosome CDS1153899 1329 - 0.322799
NA Tmden_0492 Peptidase S41A, C-terminal proteasechromosome CDS494645 1320 - 0.353788
NA Tmden_0586 Glycosyl transferase, family 2chromosome CDS593968 750 - 0.333333
NA Tmden_0879 Outer membrane efflux proteinchromosome CDS909091 1452 - 0.340909
NA Tmden_0193 Glycosyl transferase, group 1chromosome CDS195874 1095 - 0.273973
NA Tmden_1110 conserved hypothetical proteinchromosome CDS1166448 831 + 0.33213
NA Tmden_1073 Peptidoglycan glycosyltransferasechromosome CDS1135661 1815 - 0.354821
NA Tmden_1637 Small GTP-binding protein domainchromosome CDS1718516 1791 + 0.384701
NA Tmden_1441 putative efflux transporterchromosome CDS1509928 753 - 0.357238
NA Tmden_0588 Glycosyl transferase, group 1chromosome CDS595431 1104 - 0.355978
NA Tmden_0332 UDP-N-acetylmuramyl-tripeptide synthetasechromosome CDS332164 1302 + 0.330261
NA Tmden_0903 Lipid-A-disaccharide synthasechromosome CDS936270 1047 - 0.338109
NA Tmden_1616 UDP-N-acetylmuramoylalanine-D-glutamate ligasechromosome CDS1695938 1206 + 0.365672
NA Tmden_1567 Protein of unknown function DUF583chromosome CDS1642253 357 - 0.322129
NA Tmden_1418 UDP-N-acetylglucosamine 2-epimerasechromosome CDS1482147 1068 - 0.348315
NA Tmden_0878 Secretion protein HlyDchromosome CDS908303 792 - 0.343434
NA Tmden_1226 Dihydrodipicolinate synthase subfamilychromosome CDS1294366 894 + 0.376958
NA Tmden_0585 heptosyltransferase-like proteinchromosome CDS592999 969 + 0.356037
NA Tmden_0592 Polysaccharide biosynthesis protein CapDchromosome CDS600064 1206 + 0.325041
NA Tmden_0894 NAD-dependent epimerase/dehydratasechromosome CDS924078 1050 + 0.352381
NA Tmden_1139 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxDchromosome CDS1193820 951 - 0.356467
NA Tmden_1078 hypothetical proteinchromosome CDS1139453 516 - 0.296512
NA Tmden_0608 Prolipoprotein diacylglyceryl transferasechromosome CDS616429 825 + 0.370909
NA Tmden_1700 Undecaprenyl-phosphategalactosephosphotransferasechromosome CDS1780032 1317 - 0.308276
NA Tmden_2038 Peptidase A8, signal peptidase IIchromosome CDS2124348 462 - 0.329004
NA Tmden_0579 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS586888 1011 + 0.327399
NA Tmden_1785 Mandelate racemase/muconate lactonizing enzymechromosome CDS1868527 1026 - 0.381092
NA Tmden_1615 Phospho-N-acetylmuramoyl-pentapeptidetransferasechromosome CDS1694877 1062 + 0.34275
NA Tmden_0016 Phospholipase A1chromosome CDS22219 1080 + 0.344444
NA Tmden_2012 Secretion protein HlyDchromosome CDS2095569 1059 - 0.353163
NA Tmden_1642 conserved hypothetical proteinchromosome CDS1725137 1998 - 0.332833
NA Tmden_1973 conserved hypothetical proteinchromosome CDS2056835 696 - 0.362069
NA Tmden_1701 Glycosyl transferase, group 1chromosome CDS1781345 1092 - 0.318681
NA Tmden_0644 TonB-likechromosome CDS655887 702 + 0.310541
NA Tmden_2041 Secretion protein HlyDchromosome CDS2127523 1197 + 0.380952
NA Tmden_0190 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS192919 1182 + 0.347716
NA Tmden_0872 4-hydroxy-3-methylbut-2-enyl diphosphate reductasechromosome CDS900236 828 + 0.321256
NA Tmden_1732 ABC-2chromosome CDS1816949 792 - 0.352273
NA Tmden_0191 Glycosyl transferase, group 1chromosome CDS194070 1095 - 0.321461
NA Tmden_2006 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS2087890 813 + 0.338253
NA Tmden_0900 Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferasechromosome CDS933484 753 - 0.35591
NA Tmden_1735 sugar transferasechromosome CDS1820543 921 + 0.383279
NA Tmden_1731 ABC transporter-related proteinchromosome CDS1815720 1233 - 0.403893
NA Tmden_0176 Cytidyltransferase-relatedchromosome CDS178933 1410 - 0.343262
NA Tmden_0534 Outer membrane efflux proteinchromosome CDS533126 1233 + 0.341444
NA Tmden_0046 Putative salt-induced outer membrane protein-likechromosome CDS54031 807 - 0.314746
NA Tmden_0853 Tetraacyldisaccharide 4'-kinasechromosome CDS881588 828 + 0.330918