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2024-04-29 16:21:31

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Pelobacter carbinolicus DSM 2380, DSM 2380

Number of genes found: 201

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pelobacter carbinolicus DSM 2380, DSM 2380
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Pcar_2874 probable outer membrane channel lipoproteinchromosome CDS3359511 1515 - 0.551815
NA Pcar_1775 conserved hypothetical proteinchromosome CDS2077494 759 + 0.570487
NA Pcar_2595 glucose-1-phosphate thymidylyltransferasechromosome CDS3045507 879 + 0.558589
NA Pcar_2208 penicillin-binding proteinchromosome CDS2581029 1971 - 0.580923
NA Pcar_2965 peptidase, M23/M37 familychromosome CDS3474114 1302 + 0.582181
NA Pcar_1140 polysaccharide biosynthesis related-proteinchromosome CDS1337514 864 - 0.568287
NA Pcar_1137 putative pore coat polysaccharide biosynthesis protein F CMP-KDO synthetasechromosome CDS1335058 729 - 0.54321
NA Pcar_1526 glycosyl transferases group 1chromosome CDS1789133 1110 + 0.55045
NA Pcar_2593 dTDP-glucose 4,6-dehydratasechromosome CDS3043349 1089 + 0.556474
NA Pcar_2035 conserved hypothetical proteinchromosome CDS2365599 1173 - 0.571185
NA Pcar_1267 glycosyl transferasechromosome CDS1487875 903 + 0.551495
NA Pcar_0188 outer membrane proteinchromosome CDS238359 1824 - 0.610746
NA Pcar_2472 peptidase, M23/M37 familychromosome CDS2913373 1326 + 0.567873
NA Pcar_1101 outer membrane protein OprN precursorchromosome CDS1296119 1413 + 0.599434
NA Pcar_1877 prolipoprotein diacylglyceryl transferasechromosome CDS2191307 786 - 0.540712
NA Pcar_0450 Surface lipoprotein-likechromosome CDS549220 873 + 0.514318
NA Pcar_1099 conserved hypothetical proteinchromosome CDS1291722 1206 + 0.556385
NA Pcar_2724 glutamate racemasechromosome CDS3181606 801 - 0.599251
NA Pcar_1463 putative polysaccharide export protein YccZ precursorchromosome CDS1708349 1059 + 0.529745
NA Pcar_2912 conserved hypothetical proteinchromosome CDS3399478 1602 - 0.593009
NA Pcar_1466 UDP-glucose dehydrogenasechromosome CDS1713034 1338 + 0.544843
NA Pcar_1273 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-likechromosome CDS1493045 1533 + 0.513372
NA Pcar_1805 glucosamine--fructose-6-phosphate aminotransferase (isomerizing)chromosome CDS2108980 1830 - 0.545355
NA Pcar_2204 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS2575636 1353 - 0.610495
NA Pcar_0306 conserved hypothetical proteinchromosome CDS385326 855 - 0.568421
NA Pcar_1253 UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferasechromosome CDS1473409 1032 + 0.565891
NA Pcar_2974 OmpA domain proteinchromosome CDS3484411 573 - 0.553229
NA Pcar_2200 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS2571124 900 - 0.622222
NA Pcar_2199 D-alanine--D-alanine ligasechromosome CDS2570162 918 - 0.569717
NA Pcar_0667 outer membrane proteinchromosome CDS807391 1437 + 0.607516
NA Pcar_0547 OmpA domain proteinchromosome CDS668646 1263 - 0.581156
NA Pcar_1429 lipoprotein NlpDchromosome CDS1676201 840 + 0.533333
NA Pcar_2234 alanine racemasechromosome CDS2606300 1137 - 0.598945
NA Pcar_1251 outer membrane protein, putativechromosome CDS1470515 2256 + 0.526596
NA Pcar_2028 lipocalin-likechromosome CDS2359220 555 - 0.531532
NA Pcar_2031 N-acetylmuramoyl-L-alanine amidase-likechromosome CDS2361305 1080 - 0.551852
NA Pcar_1796 teichuronic acid biosynthesischromosome CDS2098515 750 - 0.344
NA Pcar_1673 carboxy-terminal processing proteasechromosome CDS1954094 1326 - 0.527149
NA Pcar_1255 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferasechromosome CDS1474893 771 + 0.539559
NA Pcar_2790 HmsRchromosome CDS3253169 1257 - 0.529037
NA Pcar_1489 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase-likechromosome CDS1743102 1656 + 0.512077
NA Pcar_2458 lipoprotein, NLP/P60 familychromosome CDS2895653 1359 - 0.606328
NA Pcar_1475 conserved hypothetical proteinchromosome CDS1722162 930 + 0.52043
NA Pcar_2934 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS3430868 1395 - 0.580645
NA Pcar_1758 putative glycosyl transferasechromosome CDS2056248 780 - 0.453846
NA Pcar_3111 conserved hypothetical clock-controlled gene-9chromosome CDS3628311 1263 + 0.575614
NA Pcar_1132 glucose-1-phosphate cytidylyltransferasechromosome CDS1330085 777 - 0.472329
NA Pcar_1464 Uncharacterized protein involved in exopolysaccharide biosynthesis-likechromosome CDS1709689 2415 + 0.549896
NA Pcar_0164 hypothetical proteinchromosome CDS207321 1491 + 0.373575
NA Pcar_0276 glucose-1-phosphate thymidylyltransferasechromosome CDS344530 996 - 0.598394
NA Pcar_1136 Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-likechromosome CDS1333970 1089 - 0.586777
NA Pcar_2690 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS3142196 1254 - 0.603668
NA Pcar_2166 outer membrane protein Fchromosome CDS2526730 675 - 0.586667
NA Pcar_2469 conserved hypothetical proteinchromosome CDS2908576 810 + 0.577778
NA Pcar_2042 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)-likechromosome CDS2374695 1854 - 0.562567
NA Pcar_0063 hypothetical proteinchromosome CDS78292 726 + 0.626722
NA Pcar_1224 rare lipoprotein A, putativechromosome CDS1435040 765 + 0.563399
NA Pcar_2271 hypothetical proteinchromosome CDS2651968 1422 - 0.516878
NA Pcar_1658 probable periplasmic tail-specific proteinasechromosome CDS1936210 2160 - 0.515278
NA Pcar_1264 heptosyltransferase family proteinchromosome CDS1484651 1053 + 0.5717
NA Pcar_1048 rod shape-determining protein MreCchromosome CDS1229624 819 - 0.598291
NA Pcar_1277 N-acetylneuraminic acid phosphate synthasechromosome CDS1497849 867 + 0.470588
NA Pcar_0938 conserved hypothetical proteinchromosome CDS1106333 1392 + 0.548132
NA Pcar_2324 membrane proteins related to metalloendopeptidaseschromosome CDS2719279 966 - 0.563147
NA Pcar_2860 conserved hypothetical proteinchromosome CDS3346490 1293 - 0.612529
NA Pcar_0638 conserved hypothetical proteinchromosome CDS770945 837 + 0.57945
NA Pcar_0885 Glycosyltransferases involved in cell wall biogenesis-likechromosome CDS1042167 1179 + 0.574215
NA Pcar_2378 Outer membrane protein W-likechromosome CDS2801294 627 - 0.489633
NA Pcar_1274 lipopolysaccharide core biosynthesis protein WaaGchromosome CDS1494818 1095 + 0.514155
NA Pcar_0024 ADP-L-glycero-D-mannoheptose-6-epimerasechromosome CDS26990 948 + 0.572785
NA Pcar_0020 Nucleoside-diphosphate-sugar epimerases-likechromosome CDS22285 894 + 0.605145
NA Pcar_2126 outer membrane efflux proteinchromosome CDS2476605 1527 - 0.561886
NA Pcar_2958 phosphoglucomutase/phosphomannomutase family proteinchromosome CDS3465713 2529 - 0.578885
NA Pcar_2482 hypothetical proteinchromosome CDS2921811 267 + 0.561798
NA Pcar_1536 capsular polysaccharide biosynthesis proteinchromosome CDS1799373 1944 + 0.502058
NA Pcar_2976 TonB protein, putativechromosome CDS3486445 870 - 0.606897
NA Pcar_1009 membrane proteinchromosome CDS1181638 996 + 0.562249
NA Pcar_0072 outer membrane proteinchromosome CDS87863 678 - 0.49705
NA Pcar_1529 UDP-galactose phosphate transferase-likechromosome CDS1792914 681 + 0.522761
NA Pcar_2267 hypothetical proteinchromosome CDS2648569 741 + 0.530364
NA Pcar_2377 OmpA domain proteinchromosome CDS2799549 1284 + 0.579439
NA Pcar_1716 metal ion efflux outer membrane protein family protein, putativechromosome CDS2007067 1362 - 0.520558
NA Pcar_0311 Surface antigen-likechromosome CDS390785 1278 + 0.57903
NA Pcar_2597 probable glycosyltransferasechromosome CDS3047125 1125 + 0.560889
NA Pcar_1495 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase, putativechromosome CDS1749148 792 - 0.566919
NA Pcar_1715 cobalt-zinc-cadmium resistance protein (CzcB)chromosome CDS2005335 1503 - 0.566201
NA Pcar_1519 undecaprenyl-phosphateglucosephosphotransferasechromosome CDS1781192 645 + 0.43876
NA Pcar_0812 putative transport proteinchromosome CDS958780 825 + 0.512727
NA Pcar_1467 capsular polysaccharide biosynthesis protein Ichromosome CDS1714521 1011 + 0.534125
NA Pcar_3002 probable transport/efflux transmembrane proteinchromosome CDS3511702 1104 - 0.640399
NA Pcar_2748 17 kD surface antigen precursorchromosome CDS3206495 471 + 0.617834
NA Pcar_1524 lipopolysaccharide biosynthesis proteinchromosome CDS1786185 1188 + 0.5
NA Pcar_1130 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis-likechromosome CDS1327634 1356 - 0.560472
NA Pcar_1618 GTP-binding protein LepAchromosome CDS1891120 1800 - 0.532222
NA Pcar_2962 Secreted and surface protein containing fasciclin-like repeats-likechromosome CDS3472493 570 + 0.554386
NA Pcar_2421 dihydrodipicolinate synthasechromosome CDS2848675 882 + 0.56576
NA Pcar_1883 penicillin tolerance protein LytBchromosome CDS2197026 840 - 0.525
NA Pcar_2198 cell division protein FtsQchromosome CDS2569271 849 - 0.528857
NA Pcar_1806 UDP-glucose dehydrogenasechromosome CDS2111711 1404 - 0.497151
NA Pcar_1530 putative eps aminotransferase proteinchromosome CDS1793581 1215 + 0.530041
NA Pcar_2933 glucosamine--fructose-6-phosphate aminotransferase (isomerizing)chromosome CDS3428975 1830 - 0.583607
NA Pcar_2373 ABC-type transport system involved in lipoprotein release permease component-likechromosome CDS2794911 1224 + 0.603758
NA Pcar_3140 glucose-inhibited division protein Bchromosome CDS3659101 654 - 0.490826
NA Pcar_1371 Cell wall-associated hydrolases (invasion-associated proteins)-likechromosome CDS1604898 822 - 0.557178
NA Pcar_0453 Periplasmic protein TonB links inner and outer membranes-likechromosome CDS551415 870 - 0.594253
NA Pcar_2437 membrane-bound lytic murein transglycosylase, putativechromosome CDS2868561 1092 + 0.606227
NA Pcar_1800 Glycosyltransferase-likechromosome CDS2102553 1209 - 0.337469
NA Pcar_1142 capsular polysaccharide biosynthesis proteinchromosome CDS1339474 1071 - 0.528478
NA Pcar_1252 outer membrane protein, putativechromosome CDS1472876 516 + 0.496124
NA Pcar_1527 putative glycosyl transferase family 1chromosome CDS1790331 1116 + 0.543011
NA Pcar_2389 TonB-dependent receptor, putativechromosome CDS2814527 738 - 0.635501
NA Pcar_1946 3-deoxy-D-manno-octulosonatecytidylyltransferasechromosome CDS2259910 753 - 0.568393
NA Pcar_2305 glycosyl transferase, group 1 family proteinchromosome CDS2691040 1182 - 0.600677
NA Pcar_1321 lytic murein transglycosylase, putativechromosome CDS1545087 567 - 0.544974
NA Pcar_1015 Outer membrane protein-likechromosome CDS1189947 1467 - 0.523517
NA Pcar_3098 hypothetical proteinchromosome CDS3614556 408 - 0.57598
NA Pcar_1109 hypothetical proteinchromosome CDS1305409 756 - 0.543651
NA Pcar_1313 hypothetical proteinchromosome CDS1534780 2430 + 0.560082
NA Pcar_2243 efflux transporter, RND family, MFP subunitchromosome CDS2616967 1131 + 0.61008
NA Pcar_2454 lipoprotein signal peptidasechromosome CDS2889443 486 - 0.578189
NA Pcar_1914 conserved hypothetical zinc metalloproteasechromosome CDS2230040 1341 - 0.567487
NA Pcar_0010 penicillin-binding protein, 1A familychromosome CDS12298 2394 - 0.555138
NA Pcar_0270 efflux transporter, RND family, MFP subunitchromosome CDS336124 1254 - 0.604466
NA Pcar_2596 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS3046418 507 + 0.544379
NA Pcar_1927 glycosyl transferase, group 2 family proteinchromosome CDS2243379 1083 - 0.54386
NA Pcar_2374 ABC-type transport system involved in lipoprotein release permease component-likechromosome CDS2796136 1230 + 0.595122
NA Pcar_2451 conserved hypothetical proteinchromosome CDS2886749 1143 + 0.543307
NA Pcar_0032 outer membrane lipoprotein carrier protein LolA, putativechromosome CDS36529 732 + 0.612022
NA Pcar_1657 OmpA domain proteinchromosome CDS1935054 873 - 0.555556
NA Pcar_3137 conserved hypothetical proteinchromosome CDS3656963 408 - 0.487745
NA Pcar_1807 UDP-glucose 4-epimerasechromosome CDS2113257 975 - 0.523077
NA Pcar_1122 Glycosyltransferases involved in cell wall biogenesis-likechromosome CDS1318611 1095 - 0.474886
NA Pcar_1465 Capsular polysaccharide biosynthesis protein-likechromosome CDS1712193 771 + 0.539559
NA Pcar_0845 Periplasmic protein TonB links inner and outer membranes-likechromosome CDS999532 780 - 0.644872
NA Pcar_1128 Nucleoside-diphosphate-sugar epimerases-likechromosome CDS1326221 864 - 0.56713
NA Pcar_2210 S-adenosyl-methyltransferase MraWchromosome CDS2583424 945 - 0.593651
NA Pcar_0814 multidrug efflux system outer membrane subunitchromosome CDS960585 1440 + 0.634028
NA Pcar_2205 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS2576992 1077 - 0.55896
NA Pcar_1123 Glycosyltransferase-likechromosome CDS1319752 1323 - 0.521542
NA Pcar_2653 dolichyl-phosphate mannose synthase-likechromosome CDS3106929 1170 - 0.62906
NA Pcar_2557 penicillin-binding protein 1Bchromosome CDS2999124 2337 - 0.591356
NA Pcar_2201 UDP-N-acetylmuramate--alanine ligasechromosome CDS2572025 1377 - 0.571532
NA Pcar_0129 Rhs family protein-likechromosome CDS158480 3954 - 0.507081
NA Pcar_1261 tetraacyldisaccharide 4'-kinasechromosome CDS1482171 1074 + 0.56797
NA Pcar_2658 Outer membrane lipoprotein-sorting protein-likechromosome CDS3112029 621 - 0.565217
NA Pcar_1131 CDP-glucose 4,6-dehydratasechromosome CDS1328982 1104 - 0.602355
NA Pcar_0524 amino-acid abc transporter binding proteinchromosome CDS634594 1494 + 0.512048
NA Pcar_1046 penicillin-binding protein 2chromosome CDS1227265 1860 - 0.588172
NA Pcar_1263 ADP-heptose--LPS heptosyltransferase II, putativechromosome CDS1483623 1032 + 0.581395
NA Pcar_0543 penicillin binding protein 1Cchromosome CDS656798 2343 - 0.619718
NA Pcar_1258 lipid A disaccharide synthase (LpxB)chromosome CDS1477941 1179 + 0.569975
NA Pcar_2594 dTDP-6-deoxy-L-mannose-dehydrogenasechromosome CDS3044474 945 + 0.572487
NA Pcar_2541 TonB-dependent receptor, putativechromosome CDS2982928 819 - 0.594628
NA Pcar_1271 glycosyl transferase, group 2 family proteinchromosome CDS1492014 714 + 0.502801
NA Pcar_2206 probable murein precusor biosynthesis bifunctional proteinchromosome CDS2578080 1392 - 0.615661
NA Pcar_3093 outer membrane efflux family proteinchromosome CDS3607576 1512 + 0.62963
NA Pcar_0668 membrane-fusion proteinchromosome CDS808817 1182 + 0.632826
NA Pcar_1540 phosphotyrosine-protein phosphatase (capsular polysaccharide biosynthesis)chromosome CDS1805960 708 + 0.521186
NA Pcar_2715 small-conductance mechanosensitive channelchromosome CDS3171520 813 + 0.571956
NA Pcar_2252 Glycosyltransferases involved in cell wall biogenesis-likechromosome CDS2630190 939 + 0.481363
NA Pcar_2392 hypothetical proteinchromosome CDS2816372 816 - 0.568627
NA Pcar_0289 outer membrane efflux proteinchromosome CDS360647 1425 + 0.564912
NA Pcar_1533 Sugar transferases involved in lipopolysaccharide synthesis-likechromosome CDS1796141 1098 + 0.455373
NA Pcar_1804 UDP-glucose 4-epimerasechromosome CDS2107718 1014 - 0.47929
NA Pcar_2207 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligasechromosome CDS2579456 1524 - 0.597113
NA Pcar_1798 Glycosyltransferase-likechromosome CDS2099793 1176 - 0.311224
NA Pcar_0815 probable periplasmic proteinchromosome CDS962021 1305 + 0.592337
NA Pcar_2972 osteoblast specific factor 2-related proteinchromosome CDS3483022 432 + 0.506944
NA Pcar_1257 pleiotropic regulatory proteinchromosome CDS1476837 1095 + 0.540639
NA Pcar_0287 multidrug resistance proteinchromosome CDS356287 1185 + 0.577215
NA Pcar_0365 efflux transporter, RND family, MFP subunitchromosome CDS453726 1185 + 0.588186
NA Pcar_2877 conserved hypothetical proteinchromosome CDS3362905 1152 - 0.539931
NA Pcar_1522 glycosyl transferase (WbpU)-likechromosome CDS1783690 1116 + 0.501792
NA Pcar_1539 exopolysaccharide biosynthesis proteinchromosome CDS1803690 2193 + 0.495668
NA Pcar_2590 glycosyl transferase, group 1 family proteinchromosome CDS3040447 996 + 0.5
NA Pcar_0169 UDP-N-acetylmuramyl pentapeptide synthase-likechromosome CDS213972 1260 + 0.559524
NA Pcar_1462 putative glycosyl transferasechromosome CDS1706595 1206 + 0.563847
NA Pcar_1236 apolipoprotein N-acyltransferasechromosome CDS1450481 1521 + 0.570677
NA Pcar_3094 efflux transporter, RND family, MFP subunitchromosome CDS3609087 1182 + 0.620135
NA Pcar_1282 ADP-heptose synthasechromosome CDS1503604 1473 + 0.565513
NA Pcar_0044 Glycosyltransferases involved in cell wall biogenesis-likechromosome CDS50024 1059 - 0.608121
NA Pcar_3003 Outer membrane protein-likechromosome CDS3512810 2451 - 0.610363
NA Pcar_1538 capsular polysaccharide export protein, putativechromosome CDS1802824 807 + 0.484511
NA Pcar_2251 nucleotide sugar dehydratasechromosome CDS2629172 969 + 0.534572
NA Pcar_1370 Cell division protein FtsI/penicillin-binding protein 2-likechromosome CDS1603352 1386 - 0.52886
NA Pcar_1260 3-deoxy-D-manno-octulosonic-acid transferase, putativechromosome CDS1480879 1296 + 0.570988
NA Pcar_1944 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS2257347 834 - 0.586331
NA Pcar_2592 Glycosyltransferases involved in cell wall biogenesis-likechromosome CDS3042388 927 + 0.331176
NA Pcar_2486 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)-likechromosome CDS2924216 726 + 0.621212
NA Pcar_0739 organic solvent tolerance protein, putativechromosome CDS877276 2106 + 0.545109
NA Pcar_2202 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS2573449 1077 - 0.619313
NA Pcar_1152 hypothetical proteinchromosome CDS1349443 327 - 0.553517
NA Pcar_1249 ABC transporter, permease proteinchromosome CDS1468512 1254 + 0.522329
NA Pcar_2901 putative glycosyltransferasechromosome CDS3388058 879 - 0.506257
NA Pcar_0073 conserved hypothetical proteinchromosome CDS88700 1209 - 0.532672
NA Pcar_1141 spore coat polysaccharide biosynthesis protein spsCchromosome CDS1338374 1140 - 0.588596
NA Pcar_0364 Outer membrane protein-likechromosome CDS452227 1503 + 0.578177
NA Pcar_2343 UDP-3-O-acyl N-acetylglucosamine deacetylasechromosome CDS2740593 930 + 0.552688
NA Pcar_3107 outer membrane lipoprotein, Slp family, putativechromosome CDS3625374 540 + 0.555556
NA Pcar_1129 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS1327098 546 - 0.571429
NA Pcar_1523 putative glycosyltransferasechromosome CDS1784973 1164 + 0.444158