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2024-05-19 08:39:00

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Carboxydothermus hydrogenoformans Z-2901, Z-2901

Number of genes found: 99

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Carboxydothermus hydrogenoformans Z-2901, Z-2901
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA CHY_1563 penicillin-binding protein, 1A familySubName: Full=Penicillin-binding protein, 1A family; chromosome CDS1400287 2397 + 0.414685
NA CHY_1053 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS930095 1149 + 0.24195
NA CHY_1635 penicillin-binding protein, 1A familySubName: Full=Penicillin-binding protein, 1A family; chromosome CDS1470571 2292 - 0.405323
NA CHY_0584 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS503842 315 + 0.365079
NA CHY_2065 cell division protein FtsQ, homologSubName: Full=Cell division protein FtsQ, homolog; chromosome CDS1848848 747 - 0.381526
NA CHY_0345 peptidoglycan biosynthesis transpeptidaseSubName: Full=Peptidoglycan biosynthesis transpeptidase; chromosome CDS299740 1953 + 0.46339
NA CHY_0674 putative cell-wall associated endopeptidaseSubName: Full=Putative cell-wall associated endopeptidase; chromosome CDS588128 825 - 0.464242
NA CHY_1012 putative flagellar proteinSubName: Full=Putative flagellar protein; chromosome CDS893906 648 + 0.424383
NA CHY_0190 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS158134 744 + 0.450269
NA CHY_1962 D-alanyl-D-alanine carboxypeptidaseSubName: Full=D-alanyl-D-alanine carboxypeptidase; EC=3.4.16.4; chromosome CDS1753451 1134 - 0.439153
NA CHY_1055 glycosyl transferase, group 1 familySubName: Full=Glycosyl transferase, group 1 family; EC=2.4.1.-; chromosome CDS932450 1101 + 0.286104
NA CHY_1160 putative spore cortex-lytic enzymeSubName: Full=Putative spore cortex-lytic enzyme; chromosome CDS1034159 483 + 0.47205
NA CHY_1049 dolichyl-phosphate-mannose-proteinmannosyltransferaseSubName: Full=Dolichyl-phosphate-mannose-protein mannosyltransferase; EC=2.4.1.109; chromosome CDS926471 1557 + 0.32113
NA CHY_1057 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS934570 942 + 0.447983
NA CHY_0246 Mur ligase family proteinSubName: Full=Mur ligase family protein; chromosome CDS211097 1395 + 0.377061
NA CHY_1054 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS931290 1161 + 0.245478
NA CHY_2612 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS2322629 819 - 0.367521
NA CHY_2101 D-alanyl-D-alanine carboxypeptidaseSubName: Full=D-alanyl-D-alanine carboxypeptidase; EC=3.4.16.4; chromosome CDS1882982 1176 - 0.405612
NA CHY_1056 glycosyltransferase, group 2 familySubName: Full=Glycosyltransferase, group 2 family; chromosome CDS933547 939 - 0.337593
NA CHY_2587 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase family proteinSubName: Full=CDP-Glycerol:Poly(Glycerophosphate) glycerophosphotransferase family protein; chromosome CDS2304407 1089 - 0.364555
NA CHY_1974 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1763628 780 - 0.385897
NA CHY_0873 putative lipoproteinSubName: Full=Putative lipoprotein; chromosome CDS773453 750 - 0.409333
NA CHY_1900 putative peptidoglycan binding proteinSubName: Full=Putative peptidoglycan binding protein; chromosome CDS1699613 507 - 0.321499
NA CHY_1134 glycosyl transferase, group 1 familySubName: Full=Glycosyl transferase, group 1 family; chromosome CDS1007737 1137 + 0.414248
NA CHY_1653 prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidaseSubName: Full=Prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase; chromosome CDS1484619 696 - 0.387931
NA CHY_1777 putative membrane-associated zinc metalloproteaseSubName: Full=Putative membrane-associated zinc metalloprotease; chromosome CDS1591992 1032 - 0.453488
NA CHY_1058 glycosyltransferase, group 1 familySubName: Full=Glycosyltransferase, group 1 family; chromosome CDS935541 1158 + 0.421416
NA CHY_0088 efflux transporter, RND family, MFP subunitSubName: Full=Efflux transporter, RND family, MFP subunit; chromosome CDS74861 1182 + 0.433164
NA CHY_1404 spore germination proteinSubName: Full=Spore germination protein; chromosome CDS1257371 1080 - 0.337037
NA CHY_0304 putative peptidoglycan-binding proteinSubName: Full=Putative peptidoglycan-binding protein; chromosome CDS267335 645 - 0.420155
NA CHY_2625 M23/M37 peptidase domain proteinSubName: Full=M23/M37 peptidase domain protein; chromosome CDS2332728 645 - 0.434109
NA CHY_0861 peptidase, M23/M37 familySubName: Full=Peptidase, M23/M37 family; chromosome CDS764507 600 - 0.435
NA CHY_2554 UDP-N-acetylglucosamine 2-epimeraseRecName: Full=UDP-N-acetylglucosamine 2-epimerase; EC=5.1.3.14; chromosome CDS2276480 1143 - 0.473316
NA CHY_0750 capA domain proteinSubName: Full=CapA domain protein; chromosome CDS661139 924 + 0.410173
NA CHY_1050 glycosyltransferase, group 2 familySubName: Full=Glycosyltransferase, group 2 family; chromosome CDS928042 687 + 0.3377
NA CHY_2609 glycosyl transferase, group 2 familySubName: Full=Glycosyl transferase, group 2 family; chromosome CDS2320496 867 - 0.373702
NA CHY_1043 putative glycosyl transferaseSubName: Full=Putative glycosyl transferase; chromosome CDS922041 1104 + 0.436594
NA CHY_2599 LysM domain proteinSubName: Full=LysM domain protein; chromosome CDS2314212 1506 - 0.431607
NA CHY_1975 glycosyltransferase, group 2 familySubName: Full=Glycosyltransferase, group 2 family; chromosome CDS1764444 678 - 0.441003
NA CHY_1979 putative stage IV sporulation protein BSubName: Full=Putative stage IV sporulation protein B; chromosome CDS1767977 1338 - 0.380419
NA CHY_0982 glycosyl transferase, group 2 familySubName: Full=Glycosyl transferase, group 2 family; chromosome CDS870544 1095 + 0.29589
NA CHY_0360 M23/M37 peptidase domain proteinSubName: Full=M23/M37 peptidase domain protein; chromosome CDS309176 651 + 0.43318
NA CHY_0614 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS531060 339 + 0.362832
NA CHY_0255 putative phosphinothricin N-acetyltransferaseSubName: Full=Putative phosphinothricin N-acetyltransferase; chromosome CDS218262 507 + 0.441815
NA CHY_1799 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1610059 798 - 0.471178
NA CHY_1756 putative spore cortex-lytic enzymeSubName: Full=Putative spore cortex-lytic enzyme; chromosome CDS1571106 681 - 0.469897
NA CHY_2569 N-acetylmuramoyl-L-alanine amidaseSubName: Full=N-acetylmuramoyl-L-alanine amidase; EC=3.5.1.28; chromosome CDS2288843 834 - 0.470024
NA CHY_0851 putative redox proteinSubName: Full=Putative redox protein; chromosome CDS756549 444 + 0.423423
NA CHY_1646 transglycosylaseSubName: Full=Transglycosylase; EC=3.2.1.-; chromosome CDS1477762 546 - 0.377289
NA CHY_0404 transglycosylaseSubName: Full=Transglycosylase; chromosome CDS346674 579 + 0.442142
NA CHY_1774 glycosyltransferase, group 2 familySubName: Full=Glycosyltransferase, group 2 family; chromosome CDS1588551 651 - 0.396313
NA CHY_0668 glycosyl transferase, group 1 familySubName: Full=Glycosyl transferase, group 1 family; EC=2.4.1.-; chromosome CDS580936 1191 + 0.433249
NA CHY_2585 glycosyl transferase, WecB/TagA/CpsF familySubName: Full=Glycosyl transferase, WecB/TagA/CpsF family; chromosome CDS2301723 735 - 0.409524
NA CHY_2207 glycosyl transferase, group 1SubName: Full=Glycosyl transferase, group 1; chromosome CDS1988025 1596 - 0.402256
NA CHY_0976 glucose-1-phosphate thymidylyltransferaseSubName: Full=Glucose-1-phosphate thymidylyltransferase; EC=2.7.7.24; chromosome CDS863545 1065 + 0.384038
NA CHY_0033 mechanosensitive ion channel family proteinSubName: Full=Mechanosensitive ion channel family protein; chromosome CDS25282 855 - 0.430409
NA CHY_1041 glycosyl transferase, group 1 familySubName: Full=Glycosyl transferase, group 1 family; chromosome CDS920121 1143 - 0.452318
NA CHY_2044 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1830239 942 - 0.357749
NA CHY_0170 carboxyl-terminal proteaseSubName: Full=Carboxyl-terminal protease; EC=3.4.21.-; chromosome CDS143710 1134 + 0.455908
NA CHY_1059 bacterial sugar transferase family proteinSubName: Full=Bacterial sugar transferase family protein; chromosome CDS936691 1329 + 0.435666
NA CHY_2271 N-acetylmuramoyl-L-alanine amidaseSubName: Full=N-acetylmuramoyl-L-alanine amidase; chromosome CDS2052527 720 - 0.436111
NA CHY_1147 D-alanyl-D-alanine carboxypeptidaseSubName: Full=D-alanyl-D-alanine carboxypeptidase; EC=3.4.16.4; chromosome CDS1020861 978 + 0.373211
NA CHY_1814 glycosyltransferase, group 1 familySubName: Full=Glycosyltransferase, group 1 family; chromosome CDS1625245 1110 - 0.430631
NA CHY_2241 efflux transporter, RND family, MFP subunitSubName: Full=Efflux transporter, RND family, MFP subunit; chromosome CDS2027383 1038 - 0.434489
NA CHY_1532 transglycosylaseSubName: Full=Transglycosylase; chromosome CDS1367768 936 - 0.378205
NA CHY_2584 nucleotidyl transferaseSubName: Full=Nucleotidyl transferase; chromosome CDS2301013 714 - 0.410364
NA CHY_0636 type IV pilus operon proteinSubName: Full=Type IV pilus operon protein; chromosome CDS550250 372 + 0.392473
NA CHY_2481 putative phosphoesteraseSubName: Full=Putative phosphoesterase; chromosome CDS2221581 738 - 0.48374
alr CHY_0667 alanine racemaseRecName: Full=Alanine racemase; EC=5.1.1.1; chromosome CDS579627 1107 + 0.460705
dapA1 CHY_1156 dihydrodipicolinate synthaseRecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; chromosome CDS1028375 882 + 0.442177
dapA2 CHY_1320 dihydrodipicolinate synthaseSubName: Full=Dihydrodipicolinate synthase; EC=4.3.3.7; chromosome CDS1176484 915 + 0.374863
ddl CHY_1346 D-alanine--D-alanine ligaseRecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; chromosome CDS1205125 939 + 0.391906
dgkA CHY_0428 diacylglycerol kinaseSubName: Full=Diacylglycerol kinase; EC=2.7.1.107; chromosome CDS369960 483 + 0.378882
galE CHY_0545 UDP-glucose 4-epimeraseSubName: Full=UDP-glucose 4-epimerase; EC=5.1.3.2; chromosome CDS473497 984 + 0.421748
galU CHY_2582 UTP-glucose-1-phosphate uridylyltransferaseSubName: Full=UTP-glucose-1-phosphate uridylyltransferase; EC=2.7.7.9; chromosome CDS2299011 876 - 0.46347
gidB CHY_0008 glucose-inhibited division protein BRecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.-; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; chromosome CDS5633 708 + 0.411017
glmS CHY_2010 glucosamine--fructose-6-phosphate aminotransferase, isomerizingRecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; chromosome CDS1794053 1830 - 0.447541
glmU CHY_0192 UDP-N-acetylglucosamine pyrophosphorylaseRecName: Full=Bifunctional protein GlmU; Includes: RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.7.7.23; AltName: Full=N-acetylglucosamine-1-phosphate uridyltransferase; Includes: RecName: Full=Glucosamine-1-phosphate N-acetyltransferase; EC=2.3.1.157; chromosome CDS160130 1341 + 0.451156
lepA CHY_0410 GTP-binding protein LepARecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; chromosome CDS351684 1812 + 0.461369
lgt CHY_0564 prolipoprotein diacylglyceryl transferaseRecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; chromosome CDS486396 726 + 0.453168
lspA CHY_1506 signal peptidase IIRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; chromosome CDS1347584 435 - 0.335632
mraW CHY_2078 S-adenosyl-methyltransferase MraWRecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; chromosome CDS1863455 936 - 0.450855
mraY CHY_2072 phospho-N-acetylmuramoyl-pentapeptide-transferaseRecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; chromosome CDS1856871 978 - 0.416155
mreC CHY_0343 cell shape-determining protein MreCRecName: Full=Cell shape-determining protein MreC; AltName: Full=Cell shape protein MreC; chromosome CDS298386 822 + 0.458637
mreD CHY_0344 rod shape-determining protein MreDSubName: Full=Rod shape-determining protein MreD; chromosome CDS299225 486 + 0.397119
murA CHY_2542 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1RecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase 2; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase 2; Short=EPT 2; chromosome CDS2267596 1260 - 0.5
murAB CHY_2066 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2RecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase 1; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase 1; Short=EPT 1; chromosome CDS1849648 1263 - 0.432304
murB CHY_2067 UDP-N-acetylenolpyruvoylglucosamine reductaseRecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; chromosome CDS1850936 909 - 0.421342
murC CHY_2068 UDP-N-acetylmuramate--alanine ligaseRecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; chromosome CDS1851849 1395 - 0.434409
murD CHY_2071 UDP-N-acetylmuramoylalanine--D-glutamateligaseRecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; chromosome CDS1855488 1356 - 0.431416
murE CHY_2074 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligaseRecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13; AltName: Full=Meso-A2pm-adding enzyme; AltName: Full=Meso-diaminopimelate-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; chromosome CDS1859208 1479 - 0.423259
murF CHY_2073 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligaseRecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; chromosome CDS1857835 1377 - 0.427015
murG CHY_2069 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferaseRecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; chromosome CDS1853244 1116 - 0.442652
murI CHY_0306 glutamate racemaseRecName: Full=Glutamate racemase; EC=5.1.1.3; chromosome CDS268858 798 + 0.412281
pbpB CHY_2075 penicillin-binding protein 2BSubName: Full=Penicillin-binding protein 2B; chromosome CDS1860768 2220 - 0.440541
rfbB CHY_0979 dTDP-glucose 4,6-dehydrataseSubName: Full=dTDP-glucose 4,6-dehydratase; EC=4.2.1.46; chromosome CDS866015 930 + 0.401075
rfbC CHY_0977 dTDP-4-dehydrorhamnose 3,5-epimeraseSubName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; EC=5.1.3.13; chromosome CDS864609 477 + 0.42348
rfbD CHY_0978 dTDP-4-dehydrorhamnose reductaseSubName: Full=dTDP-4-dehydrorhamnose reductase; EC=1.1.1.133; chromosome CDS865124 852 + 0.381455
tagO CHY_2588 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferaseSubName: Full=Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase; chromosome CDS2305562 1047 - 0.365807