Gene list
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COG category: Cell wall/membrane biogenesis
Organism: Thiobacillus denitrificans ATCC 25259, ATCC 25259
Number of genes found: 194
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| Thiobacillus denitrificans ATCC 25259, ATCC 25259 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Tbd_1761 | lipoprotein releasing system, transmembrane protein, LolC/E family | SubName: Full=Lipoprotein releasing system, transmembrane protein, LolC/E family; | chromosome | CDS | 1854174 | 1245 | - | 0.638554 |
| NA | Tbd_2699 | nucleoside-diphosphate-sugar epimerase | SubName: Full=Nucleoside-diphosphate-sugar epimerase; | chromosome | CDS | 2781180 | 1011 | + | 0.615232 |
| NA | Tbd_0961 | UDP-glucose dehydrogenase | SubName: Full=UDP-glucose dehydrogenase; EC=1.1.1.22; Flags: Precursor; | chromosome | CDS | 1022931 | 1323 | + | 0.654573 |
| NA | Tbd_1328 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 1410356 | 1512 | - | 0.632937 |
| NA | Tbd_0314 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 338074 | 1110 | - | 0.692793 |
| NA | Tbd_0738 | putative LPS biosynthesis related glycosyltransferase | SubName: Full=Putative LPS biosynthesis related glycosyltransferase; | chromosome | CDS | 780903 | 1044 | - | 0.742337 |
| NA | Tbd_2759 | glycosyl transferase, family 2 | SubName: Full=Glycosyl transferase, family 2; | chromosome | CDS | 2838054 | 783 | - | 0.703704 |
| NA | Tbd_1874 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1970800 | 750 | - | 0.602667 |
| NA | Tbd_1361 | RND efflux membrane protein | SubName: Full=RND efflux membrane protein; Flags: Precursor; | chromosome | CDS | 1440704 | 1152 | - | 0.705729 |
| NA | Tbd_0301 | glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 323126 | 930 | + | 0.71828 |
| NA | Tbd_1329 | probable cobalt-zinc-cadmium outer membrane resistance protein | SubName: Full=Probable cobalt-zinc-cadmium outer membrane resistance protein; Flags: Precursor; | chromosome | CDS | 1411877 | 1278 | - | 0.684664 |
| NA | Tbd_0244 | probable outer membrane protein | SubName: Full=Probable outer membrane protein; Flags: Precursor; | chromosome | CDS | 266868 | 996 | + | 0.692771 |
| NA | Tbd_0199 | putative glycosyltransferase | SubName: Full=Putative glycosyltransferase; | chromosome | CDS | 215666 | 1395 | - | 0.65233 |
| NA | Tbd_2396 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 2469164 | 1041 | + | 0.696446 |
| NA | Tbd_1462 | small-conductance mechanosensitive channel protein | SubName: Full=Small-conductance mechanosensitive channel protein; | chromosome | CDS | 1546750 | 1122 | + | 0.643494 |
| NA | Tbd_1884 | putative nucleoside-diphosphate-sugar epimerases | SubName: Full=Putative nucleoside-diphosphate-sugar epimerases; | chromosome | CDS | 1983099 | 981 | - | 0.585117 |
| NA | Tbd_2320 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 2394864 | 1146 | - | 0.74171 |
| NA | Tbd_0614 | glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 643360 | 978 | - | 0.696319 |
| NA | Tbd_1748 | putative outer membrane protein | SubName: Full=Putative outer membrane protein; Flags: Precursor; | chromosome | CDS | 1838779 | 1188 | - | 0.69697 |
| NA | Tbd_0794 | putative outer membrane protein | SubName: Full=Putative outer membrane protein; Flags: Precursor; | chromosome | CDS | 838055 | 504 | + | 0.638889 |
| NA | Tbd_2795 | outer membrane protein | SubName: Full=Outer membrane protein; Flags: Precursor; | chromosome | CDS | 2877364 | 801 | - | 0.686642 |
| NA | Tbd_1312 | probable periplasmic glucans biosynthesis transmembrane protein | SubName: Full=Probable periplasmic glucans biosynthesis transmembrane protein; | chromosome | CDS | 1391516 | 2214 | + | 0.699639 |
| NA | Tbd_0096 | phospholipase | SubName: Full=Phospholipase; EC=3.1.1.32; Flags: Precursor; | chromosome | CDS | 102280 | 1059 | + | 0.643059 |
| NA | Tbd_0833 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 880137 | 1758 | + | 0.713311 |
| NA | Tbd_0306 | arylsulfatase | SubName: Full=Arylsulfatase; | chromosome | CDS | 327923 | 3126 | - | 0.692258 |
| NA | Tbd_1872 | putative undecaprenyl phosphate N-acetylglucosaminyltransferase | SubName: Full=Putative undecaprenyl phosphate N-acetylglucosaminyltransferase; Flags: Precursor; | chromosome | CDS | 1968924 | 963 | - | 0.657321 |
| NA | Tbd_1259 | CmpX protein | SubName: Full=CmpX protein; | chromosome | CDS | 1321084 | 666 | - | 0.626126 |
| NA | Tbd_2584 | apolipoprotein N-acyltransferase | RecName: Full=Apolipoprotein N-acyltransferase; Short=ALP N-acyltransferase; EC=2.3.1.-; | chromosome | CDS | 2659209 | 1563 | + | 0.692898 |
| NA | Tbd_0113 | peptidoglycan glycosyltransferase | SubName: Full=Peptidoglycan glycosyltransferase; EC=2.4.1.129; Flags: Precursor; | chromosome | CDS | 118991 | 1734 | + | 0.690888 |
| NA | Tbd_2205 | outer membrane protein, porin-associated lipoprotein | SubName: Full=Outer membrane protein, porin-associated lipoprotein; Flags: Precursor; | chromosome | CDS | 2285249 | 567 | - | 0.656085 |
| NA | Tbd_0499 | mechanosensitive ion channel | SubName: Full=Mechanosensitive ion channel; | chromosome | CDS | 519183 | 966 | + | 0.671843 |
| NA | Tbd_1777 | dTDP-4-dehydrorhamnose reductase | SubName: Full=dTDP-4-dehydrorhamnose reductase; EC=1.1.1.133; | chromosome | CDS | 1876923 | 894 | - | 0.689038 |
| NA | Tbd_2257 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 2331727 | 405 | - | 0.646914 |
| NA | Tbd_0743 | glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 787236 | 993 | + | 0.689829 |
| NA | Tbd_1795 | polysaccharide export outer membrane protein | SubName: Full=Polysaccharide export outer membrane protein; Flags: Precursor; | chromosome | CDS | 1896480 | 795 | - | 0.616352 |
| NA | Tbd_2444 | putative lipoprotein B precursor transmembrane | RecName: Full=LPS-assembly lipoprotein LptE; Flags: Precursor; | chromosome | CDS | 2513215 | 492 | - | 0.678862 |
| NA | Tbd_2116 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 2204688 | 1263 | - | 0.674584 |
| NA | Tbd_1774 | UDP-glucose 4-epimerase | SubName: Full=UDP-glucose 4-epimerase; | chromosome | CDS | 1873642 | 1011 | - | 0.657765 |
| NA | Tbd_1099 | uncharacterized lipoprotein | RecName: Full=Outer membrane protein assembly factor BamC; Flags: Precursor; | chromosome | CDS | 1158233 | 1104 | + | 0.655797 |
| NA | Tbd_1080 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1140016 | 1053 | - | 0.694207 |
| NA | Tbd_2335 | putative nucleotidyl transferase | SubName: Full=Putative nucleotidyl transferase; | chromosome | CDS | 2409044 | 714 | - | 0.689076 |
| NA | Tbd_2392 | peptidase S41A, protease | SubName: Full=Peptidase S41A, protease; EC=3.4.21.102; Flags: Precursor; | chromosome | CDS | 2463995 | 1407 | - | 0.648188 |
| NA | Tbd_2232 | membrane-bound lytic murein transglycosylase A | SubName: Full=Membrane-bound lytic murein transglycosylase A; Flags: Precursor; | chromosome | CDS | 2311277 | 1203 | + | 0.695761 |
| NA | Tbd_2572 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | SubName: Full=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase; | chromosome | CDS | 2646358 | 1401 | + | 0.673804 |
| NA | Tbd_1171 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 1223183 | 573 | - | 0.638743 |
| NA | Tbd_0099 | NAD-dependent epimerase/dehydratase | SubName: Full=NAD-dependent epimerase/dehydratase; | chromosome | CDS | 105540 | 1029 | + | 0.659864 |
| NA | Tbd_2523 | lipid A biosynthesis lauroyl acyltransferase | SubName: Full=Lipid A biosynthesis lauroyl acyltransferase; Flags: Precursor; | chromosome | CDS | 2595054 | 912 | + | 0.685307 |
| NA | Tbd_0458 | peptidase family protein | SubName: Full=Peptidase family protein; Flags: Precursor; | chromosome | CDS | 475017 | 1317 | - | 0.659833 |
| NA | Tbd_0111 | methyltransferase | RecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; | chromosome | CDS | 117689 | 936 | + | 0.694444 |
| NA | Tbd_0116 | Phospho-N-acetylmuramoyl-pentapeptidetransferase | RecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; | chromosome | CDS | 123638 | 1086 | + | 0.638122 |
| NA | Tbd_0083 | D-alanyl-D-alanine carboxypeptidase-like protein | SubName: Full=D-alanyl-D-alanine carboxypeptidase-like protein; Flags: Precursor; | chromosome | CDS | 85295 | 966 | - | 0.660455 |
| NA | Tbd_2532 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 2603816 | 1080 | - | 0.739815 |
| NA | Tbd_1581 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 1664418 | 1191 | - | 0.735516 |
| NA | Tbd_0114 | UDP-N-acetylmuramyl-tripeptide synthetase | RecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13; AltName: Full=Meso-A2pm-adding enzyme; AltName: Full=Meso-diaminopimelate-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; | chromosome | CDS | 120724 | 1521 | + | 0.704799 |
| NA | Tbd_0742 | ADP-heptose--LPS heptosyltransferase II | SubName: Full=ADP-heptose--LPS heptosyltransferase II; | chromosome | CDS | 786076 | 1182 | + | 0.721658 |
| NA | Tbd_0261 | Rod shape-determining protein MreC, subtype | RecName: Full=Cell shape-determining protein MreC; AltName: Full=Cell shape protein MreC; | chromosome | CDS | 282327 | 846 | + | 0.6974 |
| NA | Tbd_2807 | glucose inhibited division protein | RecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.170; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; | chromosome | CDS | 2887271 | 627 | - | 0.671451 |
| NA | Tbd_0962 | RfaE bifunctional protein, domain I | SubName: Full=RfaE bifunctional protein, domain I; | chromosome | CDS | 1024259 | 945 | + | 0.677249 |
| NA | Tbd_0119 | N-acetylglucosaminyltransferase, MurG | RecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; | chromosome | CDS | 127459 | 1101 | + | 0.731153 |
| NA | Tbd_1870 | heptosyltransferase family protein | SubName: Full=Heptosyltransferase family protein; | chromosome | CDS | 1966002 | 1059 | - | 0.677998 |
| NA | Tbd_0308 | glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 331980 | 930 | - | 0.686022 |
| NA | Tbd_0105 | Cytidyltransferase | SubName: Full=Cytidyltransferase; | chromosome | CDS | 112581 | 480 | - | 0.685417 |
| NA | Tbd_1109 | cyclopropane-fatty-acyl-phospholipid synthase | SubName: Full=Cyclopropane-fatty-acyl-phospholipid synthase; EC=2.1.1.79; | chromosome | CDS | 1166790 | 1209 | + | 0.659222 |
| NA | Tbd_0900 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 952092 | 855 | + | 0.676023 |
| NA | Tbd_2562 | putative oxidoreductase protein | SubName: Full=Putative oxidoreductase protein; | chromosome | CDS | 2636563 | 876 | - | 0.688356 |
| NA | Tbd_0305 | glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 326880 | 1026 | + | 0.664717 |
| NA | Tbd_2113 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 2202311 | 633 | + | 0.690363 |
| NA | Tbd_1497 | outer membrane lipoprotein carrier protein LolA | RecName: Full=Outer-membrane lipoprotein carrier protein; Flags: Precursor; | chromosome | CDS | 1588265 | 609 | - | 0.658457 |
| NA | Tbd_1629 | mannosyl-glycoproteinendo-beta-N-acetylglucosamidase | SubName: Full=Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; | chromosome | CDS | 1715795 | 885 | - | 0.712994 |
| NA | Tbd_1871 | putative epimerase/dehydratase polysaccharide-related biosynthesis protein | SubName: Full=Putative epimerase/dehydratase polysaccharide-related biosynthesis protein; | chromosome | CDS | 1967090 | 1845 | - | 0.664499 |
| NA | Tbd_0120 | UDP-N-acetylmuramate--alanine ligase | RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; | chromosome | CDS | 128556 | 1392 | + | 0.681753 |
| NA | Tbd_0901 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 952936 | 1314 | + | 0.697869 |
| NA | Tbd_1868 | putative glycosyltransferase | SubName: Full=Putative glycosyltransferase; | chromosome | CDS | 1963808 | 1131 | + | 0.666667 |
| NA | Tbd_0265 | rare lipoprotein A | SubName: Full=Rare lipoprotein A; Flags: Precursor; | chromosome | CDS | 286763 | 861 | + | 0.678281 |
| NA | Tbd_0262 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 283169 | 501 | + | 0.670659 |
| NA | Tbd_2794 | glucoamine-1-phosphate N-acetyltransferase, UDP-N-acetylglucosamine pyrophosphorylase | RecName: Full=Bifunctional protein GlmU; Includes: RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.7.7.23; AltName: Full=N-acetylglucosamine-1-phosphate uridyltransferase; Includes: RecName: Full=Glucosamine-1-phosphate N-acetyltransferase; EC=2.3.1.157; | chromosome | CDS | 2875800 | 1377 | - | 0.681191 |
| NA | Tbd_2522 | lipid A biosynthesis lauroyl acyltransferase | SubName: Full=Lipid A biosynthesis lauroyl acyltransferase; Flags: Precursor; | chromosome | CDS | 2594194 | 864 | + | 0.701389 |
| NA | Tbd_1196 | outer membrane lipoprotein | SubName: Full=Outer membrane lipoprotein; Flags: Precursor; | chromosome | CDS | 1258739 | 522 | - | 0.726054 |
| NA | Tbd_1776 | GDP-mannose 4,6-dehydratase | RecName: Full=GDP-mannose 4,6-dehydratase; EC=4.2.1.47; AltName: Full=GDP-D-mannose dehydratase; | chromosome | CDS | 1875749 | 1086 | - | 0.628913 |
| NA | Tbd_0282 | polysaccharide chain length determinant protein | SubName: Full=Polysaccharide chain length determinant protein; | chromosome | CDS | 298888 | 1536 | + | 0.653646 |
| NA | Tbd_2064 | nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) | SubName: Full=Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase); | chromosome | CDS | 2156459 | 984 | + | 0.677846 |
| NA | Tbd_1775 | GDP-L-fucose synthetase | RecName: Full=GDP-L-fucose synthase; EC=1.1.1.271; AltName: Full=GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; | chromosome | CDS | 1874762 | 984 | - | 0.643293 |
| NA | Tbd_1933 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2028402 | 1272 | + | 0.720912 |
| NA | Tbd_0798 | lipid-A-disaccharide synthase | RecName: Full=Lipid-A-disaccharide synthase; EC=2.4.1.182; | chromosome | CDS | 840829 | 1119 | + | 0.700626 |
| NA | Tbd_1416 | RND efflux system outer membrane lipoprotein NodT | SubName: Full=RND efflux system outer membrane lipoprotein NodT; Flags: Precursor; | chromosome | CDS | 1503810 | 1410 | - | 0.711348 |
| NA | Tbd_1779 | glucose-1-phosphate thymidylyltransferase, long form | RecName: Full=Glucose-1-phosphate thymidylyltransferase; EC=2.7.7.24; | chromosome | CDS | 1878398 | 882 | - | 0.624717 |
| NA | Tbd_2761 | putative outer membrane protein | SubName: Full=Putative outer membrane protein; Flags: Precursor; | chromosome | CDS | 2839660 | 840 | - | 0.684524 |
| NA | Tbd_0837 | peptidoglycan-binding protein LysM | SubName: Full=Peptidoglycan-binding protein LysM; Flags: Precursor; | chromosome | CDS | 887390 | 930 | + | 0.7 |
| NA | Tbd_0797 | Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase | RecName: Full=Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Short=UDP-N-acetylglucosamine acyltransferase; EC=2.3.1.129; | chromosome | CDS | 840041 | 777 | + | 0.661519 |
| NA | Tbd_1783 | glucosyltransferase protein | SubName: Full=Glucosyltransferase protein; | chromosome | CDS | 1882473 | 1026 | - | 0.560429 |
| NA | Tbd_0061 | lytic murein transglycosylase | SubName: Full=Lytic murein transglycosylase; Flags: Precursor; | chromosome | CDS | 65522 | 1305 | + | 0.704981 |
| NA | Tbd_2362 | SLT domain protein | SubName: Full=SLT domain protein; Flags: Precursor; | chromosome | CDS | 2435965 | 1965 | - | 0.691603 |
| NA | Tbd_1879 | putative dehydratase RfbH | SubName: Full=Putative dehydratase RfbH; | chromosome | CDS | 1976102 | 1323 | - | 0.541194 |
| NA | Tbd_2576 | TonB-like protein | SubName: Full=TonB-like protein; | chromosome | CDS | 2651038 | 885 | + | 0.646328 |
| NA | Tbd_0123 | cell division transmembrane protein | RecName: Full=Cell division protein FtsQ; | chromosome | CDS | 131837 | 777 | + | 0.71686 |
| NA | Tbd_0098 | UDP-glucose/GDP-mannose dehydrogenase | SubName: Full=UDP-glucose/GDP-mannose dehydrogenase; | chromosome | CDS | 104260 | 1281 | + | 0.649493 |
| NA | Tbd_1780 | dTDP-glucose 4,6-dehydratase | RecName: Full=dTDP-glucose 4,6-dehydratase; EC=4.2.1.46; | chromosome | CDS | 1879276 | 1068 | - | 0.633895 |
| NA | Tbd_0041 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 42112 | 1560 | + | 0.708333 |
| NA | Tbd_0263 | peptidoglycan glycosyltransferase | SubName: Full=Peptidoglycan glycosyltransferase; EC=2.4.1.129; Flags: Precursor; | chromosome | CDS | 283766 | 1893 | + | 0.682515 |
| NA | Tbd_0293 | glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 312837 | 1221 | + | 0.692056 |
| NA | Tbd_2089 | GTPase LepA | RecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; | chromosome | CDS | 2180703 | 1800 | - | 0.635 |
| NA | Tbd_0792 | peptidase M50, putative membrane-associated zinc metallopeptidase | SubName: Full=Peptidase M50, putative membrane-associated zinc metallopeptidase; Flags: Precursor; | chromosome | CDS | 834357 | 1365 | + | 0.665201 |
| NA | Tbd_1508 | tetraacyldisaccharide-1-P 4'-kinase | RecName: Full=Tetraacyldisaccharide 4-kinase; EC=2.7.1.130; AltName: Full=Lipid A 4-kinase; | chromosome | CDS | 1596725 | 990 | - | 0.719192 |
| NA | Tbd_0170 | outer membrane lipoprotein, putative | SubName: Full=Outer membrane lipoprotein, putative; Flags: Precursor; | chromosome | CDS | 183821 | 465 | - | 0.711828 |
| NA | Tbd_0172 | diacylglycerol kinase | SubName: Full=Diacylglycerol kinase; | chromosome | CDS | 185436 | 378 | - | 0.669312 |
| NA | Tbd_2254 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 2328534 | 1899 | - | 0.690363 |
| NA | Tbd_1873 | putative UDP-glucose 4-epimerase | SubName: Full=Putative UDP-glucose 4-epimerase; Flags: Precursor; | chromosome | CDS | 1969883 | 921 | - | 0.662324 |
| NA | Tbd_0647 | serine-type D-ala-D-ala-carboxypeptidase | SubName: Full=Serine-type D-ala-D-ala-carboxypeptidase; EC=3.4.16.4; Flags: Precursor; | chromosome | CDS | 687863 | 1209 | + | 0.66584 |
| NA | Tbd_0963 | ADP-L-glycero-D-manno-heptose-6-epimerase | RecName: Full=ADP-L-glycero-D-manno-heptose-6-epimerase; EC=5.1.3.20; AltName: Full=ADP-L-glycero-beta-D-manno-heptose-6-epimerase; Short=ADP-glyceromanno-heptose 6-epimerase; Short=ADP-hep 6-epimerase; Short=AGME; | chromosome | CDS | 1025200 | 999 | + | 0.636637 |
| NA | Tbd_0122 | D-alanine--D-alanine ligase | RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; | chromosome | CDS | 130908 | 933 | + | 0.675241 |
| NA | Tbd_1536 | glycosyltransferase, group 2 family protein | SubName: Full=Glycosyltransferase, group 2 family protein; | chromosome | CDS | 1620819 | 750 | - | 0.669333 |
| NA | Tbd_0286 | UDP-N-acetylglucosamine 2-epimerase | SubName: Full=UDP-N-acetylglucosamine 2-epimerase; EC=5.1.3.14; | chromosome | CDS | 303976 | 1116 | + | 0.680108 |
| NA | Tbd_0289 | glycosyl transferases group 1 | SubName: Full=Glycosyl transferases group 1; | chromosome | CDS | 306987 | 1221 | + | 0.708436 |
| NA | Tbd_0115 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase | RecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; | chromosome | CDS | 122241 | 1395 | + | 0.683154 |
| NA | Tbd_2139 | putative lipopolysaccharide core biosynthesis glycosyl transferase protein | SubName: Full=Putative lipopolysaccharide core biosynthesis glycosyl transferase protein; | chromosome | CDS | 2224932 | 1095 | + | 0.70411 |
| NA | Tbd_0101 | peptidase S13, D-Ala-D-Ala carboxypeptidase C | SubName: Full=Peptidase S13, D-Ala-D-Ala carboxypeptidase C; EC=3.4.16.4; Flags: Precursor; | chromosome | CDS | 108358 | 1467 | + | 0.693252 |
| NA | Tbd_1356 | RND efflux system outer membrane lipoprotein NodT | SubName: Full=RND efflux system outer membrane lipoprotein NodT; | chromosome | CDS | 1436467 | 1506 | - | 0.711155 |
| NA | Tbd_1878 | ABC transporter permease protein | SubName: Full=ABC transporter permease protein; | chromosome | CDS | 1975254 | 816 | - | 0.530637 |
| NA | Tbd_0737 | glycosyl transferase probable ADP-heptose:LPS heptosyltransferase | SubName: Full=Glycosyl transferase probable ADP-heptose:LPS heptosyltransferase; | chromosome | CDS | 779857 | 1113 | + | 0.744834 |
| NA | Tbd_2505 | monofunctional biosynthetic peptidoglycan transglycosylase | RecName: Full=Monofunctional biosynthetic peptidoglycan transglycosylase; Short=Monofunctional TGase; EC=2.4.2.-; | chromosome | CDS | 2577571 | 699 | + | 0.640916 |
| NA | Tbd_0625 | UTP--glucose-1-phosphate uridylyltransferase | SubName: Full=UTP--glucose-1-phosphate uridylyltransferase; | chromosome | CDS | 658040 | 870 | + | 0.641379 |
| NA | Tbd_2793 | glucosamine-fructose-6-phosphate aminotransferase, isomerising | RecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; | chromosome | CDS | 2873968 | 1830 | - | 0.668306 |
| NA | Tbd_0448 | outer membrane protein (porin) | SubName: Full=Outer membrane protein (Porin); Flags: Precursor; | chromosome | CDS | 468255 | 1089 | + | 0.641873 |
| NA | Tbd_1860 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, LytB protein | RecName: Full=4-hydroxy-3-methylbut-2-enyl diphosphate reductase; EC=1.17.1.2; | chromosome | CDS | 1954347 | 927 | + | 0.642934 |
| NA | Tbd_2700 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2782628 | 675 | + | 0.644444 |
| NA | Tbd_2100 | alanine racemase | RecName: Full=Alanine racemase; EC=5.1.1.1; | chromosome | CDS | 2190267 | 1104 | - | 0.688406 |
| NA | Tbd_0848 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 896951 | 1089 | - | 0.660239 |
| NA | Tbd_1867 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1962818 | 984 | + | 0.695122 |
| NA | Tbd_0294 | glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 314050 | 1242 | + | 0.721417 |
| NA | Tbd_1858 | peptidase A8, signal peptidase II | RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; | chromosome | CDS | 1953426 | 474 | + | 0.649789 |
| NA | Tbd_1881 | alpha-D-glucose-1-phosphate cytidylyltransferase | SubName: Full=Alpha-D-glucose-1-phosphate cytidylyltransferase; | chromosome | CDS | 1978510 | 759 | - | 0.592885 |
| NA | Tbd_1047 | cyclopropane fatty acyl phospholipid synthase | SubName: Full=Cyclopropane fatty acyl phospholipid synthase; EC=2.1.1.79; | chromosome | CDS | 1112560 | 1170 | + | 0.637607 |
| NA | Tbd_1747 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 1837091 | 1692 | - | 0.70331 |
| NA | Tbd_2268 | TonB domain protein | SubName: Full=TonB domain protein; | chromosome | CDS | 2339560 | 852 | - | 0.734742 |
| NA | Tbd_2337 | organic solvent tolerance transmembrane protein | RecName: Full=LPS-assembly protein LptD; Flags: Precursor; | chromosome | CDS | 2410789 | 2187 | + | 0.653864 |
| NA | Tbd_0291 | glycosyl transferase, group 1 | SubName: Full=Glycosyl transferase, group 1; | chromosome | CDS | 309748 | 1149 | + | 0.690165 |
| NA | Tbd_0992 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 1058017 | 513 | - | 0.668616 |
| NA | Tbd_2341 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 2416279 | 678 | + | 0.641593 |
| NA | Tbd_0140 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 147894 | 1902 | - | 0.683491 |
| NA | Tbd_1781 | glycosyltransferase, RfaG | SubName: Full=Glycosyltransferase, RfaG; | chromosome | CDS | 1880384 | 1098 | - | 0.643898 |
| NA | Tbd_1098 | dihydrodipicolinate synthase | RecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; | chromosome | CDS | 1157283 | 891 | + | 0.659933 |
| NA | Tbd_1230 | extracellular solute-binding protein, family 3 | RecName: Full=Membrane-bound lytic murein transglycosylase F; EC=4.2.2.n1; AltName: Full=Murein lyase F; Flags: Precursor; | chromosome | CDS | 1288506 | 1413 | - | 0.665251 |
| NA | Tbd_1784 | probable glycosyltransferase | SubName: Full=Probable glycosyltransferase; | chromosome | CDS | 1883495 | 1206 | - | 0.587894 |
| NA | Tbd_1084 | HlyD family secretion protein | SubName: Full=HlyD family secretion protein; | chromosome | CDS | 1144110 | 1071 | - | 0.713352 |
| NA | Tbd_0117 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; | chromosome | CDS | 124878 | 1425 | + | 0.698947 |
| NA | Tbd_0126 | UDP-3-0-acyl N-acetylglucosamine deacetylase | RecName: Full=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; EC=3.5.1.-; AltName: Full=UDP-3-O-acyl-GlcNAc deacetylase; | chromosome | CDS | 135223 | 915 | + | 0.639344 |
| NA | Tbd_1897 | putative Outer membrane protein | SubName: Full=Putative Outer membrane protein; Flags: Precursor; | chromosome | CDS | 1994288 | 1362 | - | 0.661527 |
| NA | Tbd_1414 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; | chromosome | CDS | 1500956 | 1293 | - | 0.711524 |
| NA | Tbd_0142 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 150379 | 1074 | + | 0.740223 |
| NA | Tbd_2462 | probable transmembrane protein | SubName: Full=Probable transmembrane protein; Flags: Precursor; | chromosome | CDS | 2532867 | 3288 | + | 0.687044 |
| NA | Tbd_1522 | glutamate racemase | RecName: Full=Glutamate racemase; EC=5.1.1.3; | chromosome | CDS | 1610025 | 798 | + | 0.64787 |
| NA | Tbd_1880 | CDP-glucose 4,6-dehydratase | SubName: Full=CDP-glucose 4,6-dehydratase; | chromosome | CDS | 1977449 | 1077 | - | 0.622098 |
| NA | Tbd_2595 | conserved hypothetical transmembrane protein | SubName: Full=Conserved hypothetical transmembrane protein; | chromosome | CDS | 2670338 | 1269 | - | 0.687943 |
| NA | Tbd_1464 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1548360 | 1173 | - | 0.69821 |
| NA | Tbd_2361 | nucleoside-diphosphate-sugar epimerases | SubName: Full=Nucleoside-diphosphate-sugar epimerases; | chromosome | CDS | 2434884 | 1038 | - | 0.67052 |
| NA | Tbd_1418 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 1508390 | 1203 | - | 0.705736 |
| NA | Tbd_2115 | RND multidrug efflux membrane fusion protein MexE precursor | SubName: Full=RND multidrug efflux membrane fusion protein MexE; Flags: Precursor; | chromosome | CDS | 2204167 | 522 | - | 0.722222 |
| NA | Tbd_1505 | 3-deoxy-D-manno-octulosonatecytidylyltransferase | RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase; EC=2.7.7.38; AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid synthase; Short=CKS; Short=CMP-KDO synthase; | chromosome | CDS | 1594649 | 759 | - | 0.695652 |
| NA | Tbd_1888 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 1986809 | 1248 | - | 0.592949 |
| NA | Tbd_1534 | putative glycosyltransferase | SubName: Full=Putative glycosyltransferase; | chromosome | CDS | 1618511 | 1599 | - | 0.700438 |
| NA | Tbd_0266 | serine-type D-ala-D-ala carboxypeptidase | SubName: Full=Serine-type D-ala-D-ala carboxypeptidase; EC=3.4.16.4; Flags: Precursor; | chromosome | CDS | 287620 | 1134 | + | 0.683421 |
| NA | Tbd_0121 | UDP-N-acetylenolpyruvoylglucosamine reductase | RecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; | chromosome | CDS | 129937 | 975 | + | 0.701538 |
| NA | Tbd_1882 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1979373 | 2460 | - | 0.584553 |
| NA | Tbd_1794 | chain length determinant protein | SubName: Full=Chain length determinant protein; Flags: Precursor; | chromosome | CDS | 1895030 | 1386 | - | 0.62482 |
| NA | Tbd_0620 | 2-dehydro-3-deoxyphosphooctonate aldolase | RecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; EC=2.5.1.55; AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthase; AltName: Full=KDO-8-phosphate synthase; Short=KDO 8-P synthase; Short=KDOPS; AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase; | chromosome | CDS | 652259 | 843 | + | 0.660735 |
| NA | Tbd_2698 | probable 3-deoxy-D-manno-octulosonic-acid transferase transmembrane protein | SubName: Full=Probable 3-deoxy-D-manno-octulosonic-acid transferase transmembrane protein; | chromosome | CDS | 2779657 | 1263 | - | 0.727633 |
| NA | Tbd_0793 | surface antigen (D15) | RecName: Full=Outer membrane protein assembly factor BamA; Flags: Precursor; | chromosome | CDS | 835718 | 2313 | + | 0.63208 |
| NA | Tbd_0740 | putative glycosyl transferase | SubName: Full=Putative glycosyl transferase; | chromosome | CDS | 784173 | 1329 | + | 0.699022 |
| NA | Tbd_1877 | ABC transporter ATPase | SubName: Full=ABC transporter ATPase; | chromosome | CDS | 1974523 | 729 | - | 0.563786 |
| NA | Tbd_1334 | Secretion protein HlyD | SubName: Full=Secretion protein HlyD; Flags: Precursor; | chromosome | CDS | 1417804 | 1494 | - | 0.695448 |
| NA | Tbd_1875 | glycosyl transferase, group 2 family protein | SubName: Full=Glycosyl transferase, group 2 family protein; | chromosome | CDS | 1971546 | 726 | - | 0.589532 |
| NA | Tbd_0910 | TonB protein | SubName: Full=TonB protein; | chromosome | CDS | 966718 | 705 | + | 0.744681 |
| NA | Tbd_1471 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1555040 | 2493 | + | 0.686723 |
| NA | Tbd_1778 | dTDP-4-dehydrorhamnose 3,5-epimerase | SubName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; EC=5.1.3.13; | chromosome | CDS | 1877813 | 543 | - | 0.622468 |
| NA | Tbd_1335 | heavy metal RND efflux outer membrane protein, CzcC family | SubName: Full=Heavy metal RND efflux outer membrane protein, CzcC family; Flags: Precursor; | chromosome | CDS | 1419294 | 1290 | - | 0.68062 |
| NA | Tbd_0281 | polysaccharide export outer membrane protein | SubName: Full=Polysaccharide export outer membrane protein; Flags: Precursor; | chromosome | CDS | 298185 | 624 | + | 0.649038 |
| NA | Tbd_0302 | glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 324060 | 1152 | + | 0.703125 |
| NA | Tbd_0713 | periplasmic protein TonB | SubName: Full=Periplasmic protein TonB; | chromosome | CDS | 751178 | 843 | - | 0.730724 |
| NA | Tbd_0795 | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxD | RecName: Full=UDP-3-O-acylglucosamine N-acyltransferase; EC=2.3.1.-; | chromosome | CDS | 838568 | 1032 | + | 0.678295 |
| NA | Tbd_1666 | peptidoglycan-binding protein LysM | SubName: Full=Peptidoglycan-binding protein LysM; Flags: Precursor; | chromosome | CDS | 1749531 | 1506 | + | 0.664675 |
| NA | Tbd_1519 | N-acetylmuramoyl-L-alanine amidase | SubName: Full=N-acetylmuramoyl-L-alanine amidase; EC=3.5.1.28; | chromosome | CDS | 1606593 | 1257 | - | 0.661098 |
| NA | Tbd_2454 | outer membrane protein | SubName: Full=Outer membrane protein; Flags: Precursor; | chromosome | CDS | 2525239 | 1209 | - | 0.713813 |
| NA | Tbd_2321 | putative secretion protein | RecName: Full=Protein CyaE; Flags: Precursor; | chromosome | CDS | 2396006 | 1386 | - | 0.737374 |
| NA | Tbd_0201 | peptidoglycan glycosyltransferase | SubName: Full=Peptidoglycan glycosyltransferase; EC=2.4.1.129; Flags: Precursor; | chromosome | CDS | 217797 | 2382 | - | 0.666247 |
| NA | Tbd_2697 | type I secretion outer membrane protein, TolC | SubName: Full=Type I secretion outer membrane protein, TolC; Flags: Precursor; | chromosome | CDS | 2778336 | 1314 | + | 0.677321 |
| NA | Tbd_2207 | putative TonB protein | SubName: Full=Putative TonB protein; | chromosome | CDS | 2287280 | 873 | - | 0.682703 |
| NA | Tbd_0385 | outer membrane lipoprotein LolB | RecName: Full=Outer-membrane lipoprotein LolB; Flags: Precursor; | chromosome | CDS | 413982 | 561 | + | 0.734403 |
| NA | Tbd_2731 | prolipoprotein diacylglyceryl transferase | RecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; | chromosome | CDS | 2811677 | 852 | + | 0.683099 |
| NA | Tbd_2455 | large-conductance mechanosensitive channel | RecName: Full=Large-conductance mechanosensitive channel; | chromosome | CDS | 2526564 | 426 | - | 0.63615 |
| NA | Tbd_1415 | RND efflux system outer membrane lipoprotein NodT | SubName: Full=RND efflux system outer membrane lipoprotein NodT; | chromosome | CDS | 1502245 | 1563 | - | 0.710813 |
| NA | Tbd_1891 | UDP-N-acetylglucosamine1-carboxyvinyltransferase | RecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase; Short=EPT; | chromosome | CDS | 1990106 | 1254 | - | 0.685008 |
| NA | Tbd_0127 | outer membrane protein | SubName: Full=Outer membrane protein; | chromosome | CDS | 136341 | 1248 | + | 0.678686 |
| NA | Tbd_0309 | glycosyltransferase | SubName: Full=Glycosyltransferase; | chromosome | CDS | 333036 | 957 | - | 0.700104 |
| NA | Tbd_1801 | undecaprenyl-phosphategalactosephosphotransferase | SubName: Full=Undecaprenyl-phosphate galactosephosphotransferase; EC=2.7.8.6; | chromosome | CDS | 1903189 | 1383 | - | 0.642806 |
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