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2024-05-04 10:15:12

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Nitrobacter winogradskyi Nb-255, Nb-255

Number of genes found: 175

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Nitrobacter winogradskyi Nb-255, Nb-255
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Nwi_1930 lytic transglycosylasechromosome CDS2114362 2208 + 0.662591
NA Nwi_0428 rare lipoprotein Achromosome CDS483277 507 - 0.648915
NA Nwi_3100 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxDchromosome CDS3360148 1026 - 0.531189
NA Nwi_1056 Cell division protein FtsQchromosome CDS1151763 1023 + 0.653959
NA Nwi_1110 conserved hypothetical proteinchromosome CDS1221633 390 - 0.635897
NA Nwi_1066 lipopolysaccharide heptosyltransferase Ichromosome CDS1166681 945 + 0.666667
NA Nwi_1848 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferasechromosome CDS2026089 807 - 0.628253
NA Nwi_1699 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1chromosome CDS1852951 1764 + 0.657029
NA Nwi_2266 LytB proteinchromosome CDS2469319 945 + 0.602116
NA Nwi_0875 surface antigen (D15)chromosome CDS949281 2034 - 0.647493
NA Nwi_0877 hypothetical proteinchromosome CDS953085 558 - 0.598566
NA Nwi_1009 Uncharacterized protein involved in outer membrane biogenesischromosome CDS1104130 1971 - 0.639777
NA Nwi_1524 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS1662411 1485 - 0.656566
NA Nwi_1908 conserved hypothetical proteinchromosome CDS2093752 477 - 0.633124
NA Nwi_1043 methyltransferasechromosome CDS1136258 999 + 0.695696
NA Nwi_0942 conserved hypothetical proteinchromosome CDS1033918 534 + 0.674157
NA Nwi_1085 mandelate racemase/muconate lactonizing enzymechromosome CDS1189448 1002 - 0.651697
NA Nwi_1065 UDP-glucose 4-epimerasechromosome CDS1165486 1011 - 0.646884
NA Nwi_2220 conserved hypothetical proteinchromosome CDS2414385 582 - 0.670103
NA Nwi_2112 glycosyl transferase, group 1chromosome CDS2308486 1098 - 0.605647
NA Nwi_1072 NAD-dependent epimerase/dehydratasechromosome CDS1173006 1944 + 0.605453
NA Nwi_2340 Substrate-binding region and inner membrane component of ABC-type glycine betaine transport systemchromosome CDS2559103 1572 + 0.630407
NA Nwi_0341 peptidase U6, penicillin-insensitive murein endopeptidasechromosome CDS382614 1053 - 0.679962
NA Nwi_2910 RND efflux system, outer membrane lipoprotein, NodTchromosome CDS3144439 1569 - 0.648184
NA Nwi_0545 glucose-1-phosphate thymidylyltransferase, long formchromosome CDS611419 876 - 0.603881
NA Nwi_1851 Outer membrane proteinchromosome CDS2028491 2532 - 0.595972
NA Nwi_2384 NAD-dependent epimerase/dehydratasechromosome CDS2604834 951 - 0.601472
NA Nwi_2053 TonB like proteinchromosome CDS2241933 771 - 0.626459
NA Nwi_0084 Outer membrane lipoprotein carrier protein LolAchromosome CDS101475 777 + 0.635779
NA Nwi_2504 prolipoprotein diacylglyceryl transferasechromosome CDS2725517 876 - 0.624429
NA Nwi_1415 lipopolysaccharide biosynthesischromosome CDS1540451 2148 + 0.61825
NA Nwi_0132 Penicillin-binding protein 1Achromosome CDS152996 2205 - 0.665306
NA Nwi_0539 glycosyl transferase, family 2chromosome CDS604413 924 + 0.534632
NA Nwi_2689 LytB proteinchromosome CDS2921580 990 - 0.622222
NA Nwi_1266 Secretion protein HlyDchromosome CDS1397888 1236 - 0.61246
NA Nwi_0343 GTP-binding protein LepAchromosome CDS384138 1812 - 0.625828
NA Nwi_1045 Penicillin-binding protein, transpeptidasechromosome CDS1137638 1740 + 0.634483
NA Nwi_2563 conserved hypothetical proteinchromosome CDS2786866 771 - 0.653696
NA Nwi_0149 glycosyl transferase, family 2chromosome CDS173398 1353 - 0.669623
NA Nwi_1928 large-conductance mechanosensitive channelchromosome CDS2112512 420 - 0.583333
NA Nwi_2575 conserved hypothetical proteinchromosome CDS2798927 1200 + 0.644167
NA Nwi_3130 Secretion protein HlyDchromosome CDS3383309 1422 + 0.642053
NA Nwi_0543 UDP-glucose/GDP-mannose dehydrogenasechromosome CDS608966 1302 - 0.612135
NA Nwi_2527 putative outer-membrane immunogenic protein precursorchromosome CDS2747653 621 + 0.637681
NA Nwi_1059 UDP-3-0-acyl N-acetylglucosamine deacetylasechromosome CDS1156343 957 + 0.621735
NA Nwi_0963 type I secretion membrane fusion protein, HlyDchromosome CDS1058387 1344 + 0.607143
NA Nwi_1269 TonB proteinchromosome CDS1401035 792 + 0.694444
NA Nwi_2971 conserved hypothetical proteinchromosome CDS3211269 855 - 0.623392
NA Nwi_1423 lytic transglycosylase, catalyticchromosome CDS1549906 1143 + 0.629046
NA Nwi_1077 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS1180075 1149 + 0.630983
NA Nwi_2194 conserved hypothetical proteinchromosome CDS2387807 1497 - 0.664663
NA Nwi_1772 Peptidase M23Bchromosome CDS1942544 1362 - 0.665932
NA Nwi_0166 NAD-dependent epimerase/dehydratasechromosome CDS193564 1062 - 0.689266
NA Nwi_2708 cell wall hydrolase, SleBchromosome CDS2938598 1383 - 0.658713
NA Nwi_0293 Cell wall-associated hydrolaseschromosome CDS333090 846 - 0.667849
NA Nwi_0695 glycosyl transferase, group 1chromosome CDS774803 1104 + 0.610507
NA Nwi_2405 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS2627501 1209 - 0.579818
NA Nwi_3028 OmpA/MotBchromosome CDS3278625 642 + 0.615265
NA Nwi_2438 lytic murein transglycosylasechromosome CDS2659543 819 - 0.637363
NA Nwi_1189 LipA a lipoproteinchromosome CDS1294814 429 + 0.680653
NA Nwi_0552 glycosyl transferase, group 1chromosome CDS620528 1368 + 0.591374
NA Nwi_0018 apolipoprotein N-acyltransferasechromosome CDS18113 1608 + 0.644901
NA Nwi_1434 type I secretion outer membrane protein, TolCchromosome CDS1560268 1473 + 0.621181
NA Nwi_1533 glycosyl transferase, family 39chromosome CDS1672754 1755 - 0.633618
NA Nwi_1048 phospho-N-acetylmuramoyl-pentapeptidetransferasechromosome CDS1142425 1107 + 0.630533
NA Nwi_0546 dTDP-4-dehydrorhamnose 3,5-epimerase relatedchromosome CDS612357 597 + 0.58794
NA Nwi_2397 acylneuraminate cytidylyltransferasechromosome CDS2617772 750 + 0.593333
NA Nwi_1074 NAD-dependent epimerase/dehydratasechromosome CDS1176200 1020 + 0.596078
NA Nwi_2845 outer membrane autotransporter barrelchromosome CDS3074650 1959 - 0.621235
NA Nwi_2957 lytic murein transglycosylasechromosome CDS3196435 1413 - 0.665959
NA Nwi_2380 UDP-glucose/GDP-mannose dehydrogenasechromosome CDS2600738 1311 + 0.643021
NA Nwi_0278 conserved hypothetical proteinchromosome CDS311913 1197 + 0.651629
NA Nwi_0876 choloylglycine hydrolasechromosome CDS951773 1065 - 0.565258
NA Nwi_1523 Secretion protein HlyDchromosome CDS1661048 1374 - 0.639738
NA Nwi_3021 conserved hypothetical proteinchromosome CDS3268446 1749 - 0.624357
NA Nwi_1719 cell wall hydrolase/autolysinchromosome CDS1876376 1269 - 0.635146
NA Nwi_0789 hypothetical proteinchromosome CDS875852 570 - 0.680702
NA Nwi_0935 MscS Mechanosensitive ion channelchromosome CDS1023424 2538 - 0.636722
NA Nwi_1534 Penicillin-binding protein 1Cchromosome CDS1674548 2121 - 0.663366
NA Nwi_0645 acylneuraminate cytidylyltransferasechromosome CDS726120 726 - 0.561983
NA Nwi_1517 glucosamine-fructose-6-phosphate aminotransferase, isomerisingchromosome CDS1650282 1827 - 0.613574
NA Nwi_1242 lipid A biosynthesis acyltransferasechromosome CDS1366904 933 - 0.632369
NA Nwi_3039 Secretion protein HlyDchromosome CDS3293456 906 - 0.673289
NA Nwi_2463 lytic transglycosylase, catalyticchromosome CDS2687120 477 + 0.628931
NA Nwi_2714 OmpA/MotBchromosome CDS2948445 504 - 0.636905
NA Nwi_0643 Short-chain dehydrogenase/reductasechromosome CDS724127 1002 - 0.552894
NA Nwi_1317 glutamate racemasechromosome CDS1448526 816 - 0.683824
NA Nwi_0567 peptidase M23Bchromosome CDS635408 2079 - 0.632516
NA Nwi_1644 Lytic murein transglycosylasechromosome CDS1785805 1224 + 0.66585
NA Nwi_0771 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT familychromosome CDS855976 1512 - 0.587963
NA Nwi_0883 dihydrodipicolinate synthetasechromosome CDS959684 885 + 0.625989
NA Nwi_2401 NAD-dependent epimerase/dehydratasechromosome CDS2621928 951 + 0.541535
NA Nwi_1071 cytidyltransferase-related, RfaE bifunctional proteinchromosome CDS1171471 1467 + 0.649625
NA Nwi_2958 UTP--glucose-1-phosphate uridylyltransferasechromosome CDS3198386 876 + 0.623288
NA Nwi_1929 dihydrodipicolinate synthase subfamilychromosome CDS2113111 891 - 0.630752
NA Nwi_1413 glycosyl transferase, group 1chromosome CDS1538362 1134 - 0.642857
NA Nwi_1864 lipoprotein releasing system, transmembrane protein, LolC/E familychromosome CDS2045570 1281 - 0.619048
NA Nwi_1047 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligasechromosome CDS1140913 1431 + 0.665968
NA Nwi_1567 putative outer-membrane protein precursorchromosome CDS1710440 777 + 0.62677
NA Nwi_2802 OmpA/MotBchromosome CDS3039920 1992 + 0.684739
NA Nwi_1070 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS1170260 981 + 0.621814
NA Nwi_2307 TonB like proteinchromosome CDS2524174 792 + 0.69697
NA Nwi_1414 Polysaccharide export proteinchromosome CDS1539499 705 - 0.704965
NA Nwi_3030 Secretion protein HlyDchromosome CDS3281173 921 + 0.666667
NA Nwi_0039 conserved hypothetical proteinchromosome CDS43206 1344 + 0.672619
NA Nwi_0647 Antifreeze-like proteinchromosome CDS727843 1053 - 0.616334
NA Nwi_2387 NAD-dependent epimerase/dehydratasechromosome CDS2608300 966 + 0.637681
NA Nwi_1054 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS1149463 918 + 0.632898
NA Nwi_0449 peptidase S41Achromosome CDS505255 1356 + 0.623894
NA Nwi_0108 Membrane-bound lytic murein transglycosylasechromosome CDS127167 1509 + 0.616965
NA Nwi_1716 Penicillin-binding protein 1Achromosome CDS1871714 2496 - 0.624199
NA Nwi_0246 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS275304 1290 + 0.655039
NA Nwi_0898 NAD-dependent epimerase/dehydratasechromosome CDS976580 1029 + 0.665695
NA Nwi_0547 dTDP-4-dehydrorhamnose reductasechromosome CDS612965 927 + 0.644013
NA Nwi_2567 glycosyl transferase, family 2chromosome CDS2791054 1047 + 0.653295
NA Nwi_0145 possible glycosyl transferaseschromosome CDS169062 651 - 0.645161
NA Nwi_1051 glycosyl transferase, family 28chromosome CDS1146332 1152 + 0.677951
NA Nwi_2014 alanine racemase regionchromosome CDS2204009 1188 + 0.654882
NA Nwi_2718 TolAchromosome CDS2954463 1053 - 0.622032
NA Nwi_2385 GDP-mannose 4,6-dehydratasechromosome CDS2605765 1086 - 0.595764
NA Nwi_3033 conserved hypothetical proteinchromosome CDS3286399 1950 + 0.661026
NA Nwi_1814 OmpA/MotBchromosome CDS1987495 966 - 0.620083
NA Nwi_2555 tetraacyldisaccharide-1-P 4'-kinasechromosome CDS2779510 1014 - 0.68146
NA Nwi_0642 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS722973 1158 - 0.613126
NA Nwi_1337 putative outer membrane proteinchromosome CDS1466308 726 + 0.643251
NA Nwi_2383 glycosyl transferase, family 4chromosome CDS2603651 1002 + 0.607784
NA Nwi_1049 UDP-N-acetylmuramoylalanine-D-glutamate ligasechromosome CDS1143542 1401 + 0.675232
NA Nwi_2396 NeuB, Antifreeze-like proteinchromosome CDS2616551 1116 - 0.63172
NA Nwi_2742 Secretion protein HlyDchromosome CDS2979841 1206 - 0.643449
NA Nwi_2012 cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS2200927 1245 + 0.596787
NA Nwi_2398 UDP-N-acetylglucosamine 2-epimerasechromosome CDS2618500 1230 + 0.634146
NA Nwi_1069 lipopolysaccharide heptosyltransferase IIchromosome CDS1168837 1071 - 0.677871
NA Nwi_0096 Glucose inhibited division proteinchromosome CDS113514 834 - 0.610312
NA Nwi_0544 dTDP-glucose 4,6-dehydratasechromosome CDS610326 1068 - 0.601124
NA Nwi_1831 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS2004092 864 - 0.671296
NA Nwi_2042 Secretion protein HlyDchromosome CDS2232242 1245 - 0.675502
NA Nwi_2386 glycosyl transferase, group 1chromosome CDS2607104 1200 + 0.624167
NA Nwi_1412 sugar transferasechromosome CDS1536722 1533 - 0.60274
NA Nwi_1455 Outer membrane efflux proteinchromosome CDS1585422 1272 + 0.636792
NA Nwi_0536 type I secretion membrane fusion protein, HlyDchromosome CDS598641 1347 + 0.598367
NA Nwi_2038 TonB like proteinchromosome CDS2227696 804 - 0.726368
NA Nwi_0244 possible outer membrane proteinchromosome CDS273509 726 - 0.628099
NA Nwi_0733 possible outer membrane proteinchromosome CDS818733 630 + 0.563492
NA Nwi_0705 TonB proteinchromosome CDS787462 804 + 0.726368
NA Nwi_1180 putative phage cell wall peptidase, NlpC/P60chromosome CDS1284527 447 + 0.695749
NA Nwi_1852 peptidase M50, putative membrane-associated zinc metallopeptidasechromosome CDS2031304 1152 - 0.602431
NA Nwi_2284 Secretion protein HlyDchromosome CDS2496543 1212 - 0.630363
NA Nwi_0496 monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS553729 681 + 0.657856
NA Nwi_2682 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1chromosome CDS2914163 1368 + 0.645468
NA Nwi_0794 putative phage cell wall peptidase, NlpC/P60chromosome CDS881869 462 - 0.642857
NA Nwi_1456 Secretion protein HlyDchromosome CDS1586690 993 + 0.598187
NA Nwi_2410 O-antigen polymerasechromosome CDS2632314 1281 + 0.607338
NA Nwi_0286 3-deoxy-D-manno-octulosonatecytidylyltransferasechromosome CDS323304 765 - 0.670588
NA Nwi_1055 D-alanine--D-alanine ligasechromosome CDS1150386 993 + 0.652568
NA Nwi_1784 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS1953513 1359 - 0.661516
NA Nwi_0548 glycosyl transferase, family 2chromosome CDS613960 2355 - 0.641614
NA Nwi_2912 Secretion protein HlyDchromosome CDS3149219 1257 - 0.624503
NA Nwi_1046 UDP-N-acetylmuramyl-tripeptide synthetasechromosome CDS1139459 1458 + 0.672154
NA Nwi_1850 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxDchromosome CDS2027370 1089 - 0.64371
NA Nwi_1466 rare lipoprotein Achromosome CDS1598811 840 - 0.62381
NA Nwi_1679 Organic solvent tolerance proteinchromosome CDS1830344 2490 + 0.618072
NA Nwi_1846 glycosyl transferase, family 19chromosome CDS2024022 1191 - 0.644836
NA Nwi_0541 glycosyl transferase, family 2chromosome CDS606862 1251 + 0.565947
NA Nwi_1532 glycosyl transferase, family 2chromosome CDS1671991 750 - 0.637333
NA Nwi_1465 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1chromosome CDS1597446 1242 - 0.627214
NA Nwi_2630 conserved hypothetical proteinchromosome CDS2859996 426 + 0.666667
NA Nwi_0326 glycosyl transferase, group 1chromosome CDS363439 1068 - 0.610487
NA Nwi_1150 Penicillin-binding protein 1Achromosome CDS1260594 2280 - 0.639035
NA Nwi_0850 lytic transglycosylase, catalyticchromosome CDS926329 1011 + 0.668645
NA Nwi_2479 lytic murein transglycosylasechromosome CDS2700704 1260 - 0.647619
NA Nwi_1052 UDP-N-acetylmuramate--alanine ligasechromosome CDS1147587 1404 + 0.646011
NA Nwi_0048 nucleotidyl transferasechromosome CDS55254 726 + 0.680441
NA Nwi_2556 three-deoxy-D-manno-octulosonic-acidtransferasechromosome CDS2780516 1293 - 0.658933
NA Nwi_2406 NAD-dependent epimerase/dehydratasechromosome CDS2628719 1005 - 0.561194
NA Nwi_2543 peptidase A8, signal peptidase IIchromosome CDS2765244 498 + 0.636546