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2024-05-03 22:15:07

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Thiomicrospira crunogena XCL-2, XCL-2

Number of genes found: 145

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thiomicrospira crunogena XCL-2, XCL-2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Tcr_0381 putative hypothetical proteinchromosome CDS431507 570 + 0.401754
NA Tcr_0477 apolipoprotein N-acyltransferasechromosome CDS533814 1467 + 0.458759
NA Tcr_2141 3-deoxy-D-manno-octulosonatecytidylyltransferasechromosome CDS2362348 747 + 0.456493
NA Tcr_2096 Secretion protein HlyDchromosome CDS2319564 1248 - 0.423077
NA Tcr_1294 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS1410005 1032 + 0.422481
NA Tcr_0586 Cell division protein FtsQchromosome CDS660883 687 + 0.393013
NA Tcr_2001 Secretion protein HlyDchromosome CDS2203911 1128 - 0.472518
NA Tcr_1779 Secretion protein HlyDchromosome CDS1943361 1284 - 0.446262
NA Tcr_1692 glucosamine--fructose-6-phosphate aminotransferase, isomerizingchromosome CDS1846233 1854 - 0.439051
NA Tcr_1510 UDP-glucose/GDP-mannose dehydrogenasechromosome CDS1645424 1173 - 0.384484
NA Tcr_1455 Acylneuraminate cytidylyltransferasechromosome CDS1573712 723 - 0.427386
NA Tcr_1585 Protein of unknown function DUF481chromosome CDS1734800 729 + 0.422497
NA Tcr_0559 methyltransferasechromosome CDS629196 945 + 0.440212
NA Tcr_1581 UDP-N-acetylmuramatechromosome CDS1729713 1377 - 0.474946
NA Tcr_1273 lipid-A-disaccharide synthasechromosome CDS1388547 1131 - 0.410256
NA Tcr_1635 Serine-type D-Ala-D-Ala carboxypeptidasechromosome CDS1788642 1191 + 0.411419
NA Tcr_1745 Glycosyl transferase, family 9chromosome CDS1905145 1221 + 0.422604
NA Tcr_0609 UDP-glucose 6-dehydrogenasechromosome CDS685393 1311 + 0.452326
NA Tcr_1601 Glycosyl transferase, group 1chromosome CDS1752367 1068 + 0.464419
NA Tcr_0799 Protein of unknown function DUF583chromosome CDS872065 501 + 0.423154
NA Tcr_0798 Peptidase M23Bchromosome CDS871193 951 + 0.416404
NA Tcr_0924 Lytic transglycosylase, catalyticchromosome CDS1000533 1992 - 0.421185
NA Tcr_1682 hypothetical proteinchromosome CDS1836169 996 - 0.340361
NA Tcr_1777 Outer membrane efflux proteinchromosome CDS1938855 1332 - 0.430931
NA Tcr_0015 MltA-interacting MipAchromosome CDS19639 840 + 0.416667
NA Tcr_0562 Peptidoglycan glycosyltransferasechromosome CDS631856 1734 + 0.426759
NA Tcr_0483 Heat shock protein DnaJ-likechromosome CDS541371 621 - 0.413849
NA Tcr_1276 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferasechromosome CDS1390952 1044 - 0.400383
NA Tcr_1633 Peptidoglycan glycosyltransferasechromosome CDS1785557 1824 + 0.417763
NA Tcr_1652 Nucleotidyl transferasechromosome CDS1804846 699 - 0.483548
NA Tcr_0987 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS1062928 1257 + 0.470963
NA Tcr_0055 VacJ-like lipoproteinchromosome CDS66370 753 + 0.36919
NA Tcr_0007 Secretion protein HlyDchromosome CDS7360 1137 + 0.451187
NA Tcr_0006 Outer membrane protein-likechromosome CDS6170 1194 + 0.446399
NA Tcr_1426 outer membrane protein, probably efflux familychromosome CDS1539450 1242 + 0.434783
NA Tcr_1172 Lipoprotein releasing system, transmembrane protein, LolC/E familychromosome CDS1277651 1251 + 0.454037
NA Tcr_0525 conserved hypothetical proteinchromosome CDS588269 507 + 0.451677
NA Tcr_0563 UDP-N-acetylmuramyl-tripeptide synthetaseschromosome CDS633586 1518 + 0.454545
NA Tcr_1684 Glycosyl transferase, family 2chromosome CDS1838446 858 - 0.310023
NA Tcr_1861 outer membrane protein, probably efflux familychromosome CDS2036774 1233 - 0.36983
NA Tcr_1274 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferasechromosome CDS1389712 771 - 0.411154
NA Tcr_0568 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS640222 1068 + 0.481273
NA Tcr_0765 outer membrane lipoprotein carrier protein LolAchromosome CDS835373 654 + 0.45107
NA Tcr_0496 lipoprotein signal peptidasechromosome CDS553722 519 + 0.470135
NA Tcr_1675 Undecaprenyl-phosphategalactosephosphotransferasechromosome CDS1828290 1398 + 0.386981
NA Tcr_1457 UDP-N-acetylglucosamine 2-epimerasechromosome CDS1575543 1224 - 0.462418
NA Tcr_2097 Outer membrane efflux proteinchromosome CDS2320814 1308 - 0.405199
NA Tcr_1461 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS1579691 1200 - 0.435833
NA Tcr_1254 Peptidase M23Bchromosome CDS1370147 720 - 0.440278
NA Tcr_1531 Secretion protein HlyDchromosome CDS1668538 1221 + 0.456183
NA Tcr_0242 Secretion protein HlyDchromosome CDS287160 1245 + 0.462651
NA Tcr_0056 Secretion protein HlyDchromosome CDS67132 1065 + 0.376526
NA Tcr_0960 3-deoxy-D-manno-octulosonatecytidylyltransferasechromosome CDS1039364 780 + 0.466667
NA Tcr_0585 D-alanine--D-alanine ligasechromosome CDS659920 942 + 0.45966
NA Tcr_1133 Secretion protein HlyDchromosome CDS1224496 1116 + 0.424731
NA Tcr_1261 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS1375372 834 - 0.447242
NA Tcr_0887 Patatinchromosome CDS965286 2226 - 0.435759
NA Tcr_0565 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS636547 1086 + 0.441068
NA Tcr_1599 diacylglycerol kinasechromosome CDS1750911 381 - 0.461942
NA Tcr_0732 Small GTP-binding protein domainchromosome CDS804870 1806 + 0.431894
NA Tcr_0239 NAD-dependent epimerase/dehydratasechromosome CDS283695 972 + 0.433128
NA Tcr_1687 NAD-dependent epimerase/dehydratasechromosome CDS1841137 930 - 0.423656
NA Tcr_0908 hypothetical proteinchromosome CDS986235 771 - 0.429313
NA Tcr_0584 UDP-N-acetylmuramate--alanine ligasechromosome CDS658506 1386 + 0.44733
NA Tcr_1083 N-acetylmuramoyl-L-alanine amidasechromosome CDS1163126 1521 + 0.420118
NA Tcr_0566 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS637705 1350 + 0.464444
NA Tcr_1689 NAD-dependent epimerase/dehydratasechromosome CDS1843369 1074 - 0.412477
NA Tcr_0925 Lytic transglycosylase, catalyticchromosome CDS1002529 1641 - 0.426569
NA Tcr_1552 dihydrodipicolinate synthasechromosome CDS1700324 861 - 0.463415
NA Tcr_0448 NAD-dependent epimerase/dehydratasechromosome CDS501435 831 - 0.454874
NA Tcr_1688 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS1842066 1317 - 0.421412
NA Tcr_1278 surface antigen (D15)chromosome CDS1392663 2292 - 0.418412
NA Tcr_1991 outer membrane lipoprotein, lipocalinchromosome CDS2189762 549 + 0.480874
NA Tcr_0210 OmpA/MotBchromosome CDS249257 945 - 0.447619
NA Tcr_1679 NAD-dependent epimerase/dehydratasechromosome CDS1833144 876 - 0.361872
NA Tcr_1551 hypothetical proteinchromosome CDS1699126 1194 - 0.439698
NA Tcr_1462 NAD-dependent epimerase/dehydratasechromosome CDS1580883 1002 - 0.444112
NA Tcr_1267 hypothetical proteinchromosome CDS1382756 813 - 0.402214
NA Tcr_2139 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS2359994 1185 + 0.455696
NA Tcr_0206 Type I secretion membrane fusion protein, HlyDchromosome CDS242933 1293 - 0.417633
NA Tcr_1674 Lipopolysaccharide biosynthesischromosome CDS1827003 1095 - 0.364384
NA Tcr_2163 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS2385419 1365 - 0.428571
NA Tcr_1516 Lipopolysaccharide heptosyltransferase Ichromosome CDS1651951 1044 - 0.414751
NA Tcr_0571 prolipoprotein diacylglyceryl transferasechromosome CDS644609 801 + 0.45568
NA Tcr_1295 MscS Mechanosensitive ion channelchromosome CDS1411070 1176 - 0.423469
NA Tcr_0453 Outer membrane efflux proteinchromosome CDS507322 1413 + 0.447983
NA Tcr_2172 hypothetical proteinchromosome CDS2393527 351 - 0.413105
NA Tcr_1743 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-likechromosome CDS1902580 1542 + 0.448768
NA Tcr_1686 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS1840613 528 - 0.348485
NA Tcr_1512 hypothetical proteinchromosome CDS1647943 912 - 0.383772
NA Tcr_1517 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS1652994 972 - 0.404321
NA Tcr_1427 Secretion protein HlyDchromosome CDS1540688 1302 + 0.450845
NA Tcr_1584 MscS Mechanosensitive ion channelchromosome CDS1733937 840 + 0.429762
NA Tcr_1781 carboxyl-terminal proteasechromosome CDS1946015 1320 - 0.413636
NA Tcr_1463 Lytic transglycosylase, catalyticchromosome CDS1581919 1200 - 0.424167
NA Tcr_0793 Peptidase S13, D-Ala-D-Ala carboxypeptidase Cchromosome CDS865774 1248 + 0.460737
NA Tcr_0773 conserved hypothetical proteinchromosome CDS843770 1212 + 0.452145
NA Tcr_0899 OmpA/MotBchromosome CDS978341 618 + 0.436893
NA Tcr_1514 Capsule polysaccharide biosynthesischromosome CDS1649932 1146 - 0.404014
NA Tcr_0352 Peptidase M23Bchromosome CDS400601 1293 - 0.433875
NA Tcr_2176 methyltransferase GidBchromosome CDS2396065 651 - 0.434716
NA Tcr_0204 Type I secretion outer membrane protein, TolCchromosome CDS240884 1326 - 0.429864
NA Tcr_0480 hypothetical proteinchromosome CDS538455 546 + 0.457875
NA Tcr_1632 hypothetical proteinchromosome CDS1785054 504 + 0.39881
NA Tcr_1654 Organic solvent tolerance proteinchromosome CDS1806720 2376 + 0.441498
NA Tcr_1520 lipid A biosynthesis acyltransferasechromosome CDS1656461 939 + 0.411076
NA Tcr_1737 Glycosyl transferase, family 2chromosome CDS1897491 939 - 0.432375
NA Tcr_1680 GDP-mannose 4,6-dehydratasechromosome CDS1833997 1035 - 0.390338
NA Tcr_0080 Lytic transglycosylase, catalyticchromosome CDS101752 1134 - 0.469136
NA Tcr_0502 Three-deoxy-D-manno-octulosonic-acidtransferase-likechromosome CDS562210 1311 - 0.463768
NA Tcr_0588 UDP-3-0-acyl N-acetylglucosamine deacetylasechromosome CDS662969 921 + 0.414767
NA Tcr_1509 NAD-dependent epimerase/dehydratasechromosome CDS1644414 1011 - 0.377844
NA Tcr_1603 Glycosyl transferase, group 1chromosome CDS1753957 1146 + 0.431065
NA Tcr_1690 Nucleotidyl transferasechromosome CDS1844446 774 - 0.401809
NA Tcr_1492 Lytic transglycosylase, catalyticchromosome CDS1615044 1503 + 0.413839
NA Tcr_1359 alanine racemasechromosome CDS1474601 1071 - 0.463119
NA Tcr_1337 choline/carnitine/betaine transportchromosome CDS1451602 2064 + 0.45688
NA Tcr_0607 UTP-glucose-1-phosphate uridylyltransferasechromosome CDS682832 879 + 0.424346
NA Tcr_0118 AsmAchromosome CDS149906 2289 + 0.439056
NA Tcr_0434 Protein of unknown function DUF214chromosome CDS486910 1278 - 0.438185
NA Tcr_0489 Phospholipase A1chromosome CDS545065 1008 + 0.419643
NA Tcr_0454 Secretion protein HlyDchromosome CDS508798 1122 + 0.434046
NA Tcr_0564 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligasechromosome CDS635117 1425 + 0.481403
NA Tcr_0958 tetraacyldisaccharide 4'-kinasechromosome CDS1038087 1008 + 0.453373
NA Tcr_1511 O-antigen polymerasechromosome CDS1646636 1311 - 0.356979
NA Tcr_0435 Protein of unknown function DUF214chromosome CDS488187 1296 - 0.443673
NA Tcr_1304 Type I secretion outer membrane protein, TolCchromosome CDS1421782 1341 - 0.445936
NA Tcr_1624 TonB-likechromosome CDS1776904 858 + 0.484848
NA Tcr_1279 putative membrane-associated zinc metallopeptidasechromosome CDS1394947 1371 - 0.413567
NA Tcr_0464 Porin, Gram-negative typechromosome CDS521193 1038 + 0.38921
NA Tcr_1458 N-acylneuraminate-9-phosphate synthasechromosome CDS1576759 1005 - 0.434826
NA Tcr_0524 Outer membrane efflux proteinchromosome CDS586872 1374 + 0.450509
NA Tcr_2142 Three-deoxy-D-manno-octulosonic-acidtransferase-likechromosome CDS2363124 1221 + 0.431613
NA Tcr_1938 LrgB-like proteinchromosome CDS2125660 738 - 0.443089
NA Tcr_1631 rod shape-determining protein MreCchromosome CDS1784216 849 + 0.416961
NA Tcr_1681 Glycosyl transferase, group 1chromosome CDS1835028 1152 - 0.34809
NA Tcr_0498 Lytic murein transglycosylasechromosome CDS555531 1230 - 0.443089
NA Tcr_1466 flagellar biosynthesischromosome CDS1586276 468 - 0.405983
NA Tcr_1704 Secretion protein HlyDchromosome CDS1865244 1038 - 0.485549
NA Tcr_1486 OmpA/MotBchromosome CDS1606610 564 - 0.445035
NA Tcr_0183 lipid A biosynthesis acyltransferasechromosome CDS215682 918 + 0.464052
NA Tcr_1277 Outer membrane chaperone Skp (OmpH)chromosome CDS1392013 534 - 0.370787
NA Tcr_1909 choline/carnitine/betaine transportchromosome CDS2090045 1983 - 0.452849
NA Tcr_0505 RfaE bifunctional protein, domains I/IIchromosome CDS565251 1443 + 0.458073
NA Tcr_2056 Penicillin-binding protein 1Achromosome CDS2270078 2415 + 0.464596