TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-04-30 08:26:34

Gene list

Applied filters:

COG category: Cell wall/membrane biogenesis
Organism: Shigella dysenteriae Sd197, Sd197

Number of genes found: 191

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SDY_2649 conserved hypothetical proteinchromosome CDS2439779 1068 - 0.539326
NA SDY_0620 hypothetical proteinchromosome CDS583992 672 + 0.50744
NA SDY_0498 hypothetical proteinchromosome CDS484134 684 + 0.502924
NA SDY_1670 unknown protein encoded by bacteriophage BP-933Wchromosome CDS1531311 1266 - 0.509479
NA SDY_1374 putative outer membrane channel proteinchromosome CDS1270947 828 + 0.536232
NA SDY_3235 putative kinasechromosome CDS2995436 1434 - 0.55788
NA SDY_2450 putative sugar transferasechromosome CDS2250018 777 + 0.50193
NA SDY_0416 putative membrane spanning export proteinchromosome CDS397600 1176 - 0.566327
NA SDY_3089 conserved hypothetical proteinchromosome CDS2864313 978 - 0.529652
NA SDY_0241 conserved hypothetical proteinchromosome CDS240296 606 - 0.349835
NA SDY_1406 hypothetical proteinchromosome CDS1298889 477 + 0.457023
NA SDY_2276 hypothetical proteinchromosome CDS2071278 309 - 0.459547
NA SDY_3034 putative amidasechromosome CDS2804385 1344 - 0.528274
NA SDY_0428 hypothetical proteinchromosome CDS416643 294 - 0.465986
NA SDY_0808 putative membrane proteinchromosome CDS754480 999 + 0.572573
NA SDY_1725 putative resistance proteinchromosome CDS1574909 519 + 0.531792
NA SDY_2383 putative membrane proteinchromosome CDS2186320 1077 - 0.532962
NA SDY_1663 hypothetical proteinchromosome CDS1525712 309 + 0.449838
NA SDY_2453 conserved hypothetical proteinchromosome CDS2253854 1653 + 0.508772
NA SDY_2395 putative nucleotide di-P-sugar epimerase or dehydratasechromosome CDS2200213 1050 + 0.539048
NA SDY_2223 putative enzyme of sugar metabolismchromosome CDS2027230 825 + 0.518788
NA SDY_1749 hypothetical proteinchromosome CDS1593031 435 + 0.48046
NA SDY_1410 conserved hypothetical proteinchromosome CDS1303129 1032 - 0.435078
NA SDY_1710 putative outer membrane proteinchromosome CDS1563061 582 - 0.536082
NA SDY_1373 hypothetical proteinchromosome CDS1270401 498 + 0.546185
NA SDY_0429 hypothetical proteinchromosome CDS416946 621 - 0.555556
NA SDY_2449 hypothetical proteinchromosome CDS2249487 528 + 0.517045
acrA SDY_0456 acridine efflux pumpchromosome CDS447726 1194 + 0.535176
aefA SDY_0454 putative alpha helix proteinchromosome CDS443447 3363 - 0.517098
alr SDY_4521 alanine racemase 1chromosome CDS4229531 1080 - 0.553704
amiA SDY_2633 N-acetylmuramoyl-l-alanine amidase Ichromosome CDS2425444 870 + 0.501149
amiB SDY_4420 N-acetylmuramoyl-l-alanine amidase IIchromosome CDS4136425 1338 - 0.550822
asmA SDY_2198 suppressor of ompF assembly mutantschromosome CDS1999870 1854 + 0.526429
blc SDY_4393 outer membrane lipoproteinchromosome CDS4111129 534 - 0.52809
caiT SDY_0062 probable carnitine transporterchromosome CDS59170 1515 - 0.520792
cfa SDY_1887 cyclopropane fatty acyl phospholipid synthasechromosome CDS1721699 1149 + 0.476066
csgG SDY_0999 curli production assembly/transport componentchromosome CDS947347 834 + 0.505995
cutF SDY_0211 copper homeostasis proteinchromosome CDS216298 711 + 0.524613
dacA SDY_0554 D-alanyl-D-alanine carboxypeptidase, fraction Achromosome CDS535553 1212 - 0.499175
dacB SDY_3363 D-alanyl-D-alanine carboxypeptidase, fraction Bchromosome CDS3120368 1434 + 0.532078
dacC SDY_0841 D-alanyl-D-alanine carboxypeptidasechromosome CDS784024 1203 + 0.516209
dacD SDY_2233 penicillin binding protein 6bchromosome CDS2035938 1137 + 0.493404
dapA SDY_2667 dihydrodipicolinate synthasechromosome CDS2458471 879 - 0.514221
ddg SDY_2576 putative heat shock proteinchromosome CDS2372805 987 + 0.506586
ddlA SDY_0365 D-alanine-D-alanine ligase Achromosome CDS352680 1095 + 0.514155
ddlB SDY_0122 D-alanine-D-alanine ligase Bchromosome CDS122887 921 + 0.511401
dgkA SDY_4532 diacylglycerol kinasechromosome CDS4239176 369 - 0.523035
dniR SDY_0230 transcriptional regulator for nitrite reductasechromosome CDS233762 1359 - 0.520235
fepE SDY_0518 ferric enterobactin transportchromosome CDS503562 1134 + 0.443563
flgJ SDY_2070 FlgJchromosome CDS1882427 942 - 0.542463
ftsI SDY_0114 penicillin-binding protein 3chromosome CDS112067 1767 + 0.537068
ftsQ SDY_0123 cell division proteinchromosome CDS123809 831 + 0.533093
galE SDY_0706 UDP-galactose-4-epimerasechromosome CDS663597 1017 - 0.542773
galF SDY_2203 probable UDP-gal transferasechromosome CDS2005517 894 + 0.514541
galU SDY_1288 glucose-1-phosphate uridylyltransferasechromosome CDS1193243 909 + 0.466447
gidB SDY_4008 GldBchromosome CDS3742914 624 + 0.487179
glmS SDY_4019 L-glutamine:D-fructose-6-phosphateaminotransfera sechromosome CDS3752925 1830 + 0.534426
glmU SDY_4018 N-acetyl glucosamine-1-phosphate uridyltransferasechromosome CDS3751393 1371 + 0.528082
hemM SDY_1258 5-aminolevulinate synthesis enzyme, main pathway, possibly glutamyl-tRNA dehydrogenasechromosome CDS1164968 624 - 0.511218
hlpA SDY_0194 histone-like proteinchromosome CDS200744 486 + 0.502058
htrB SDY_2293 heat shock proteinchromosome CDS2082672 921 + 0.528773
imp SDY_0079 organic solvent tolerancechromosome CDS73877 2355 - 0.5138
kdsA SDY_1264 2-dehydro-3-deoxyphosphooctulonate aldolasechromosome CDS1170256 855 + 0.51462
kdsB SDY_2340 CTP:CMP-3-deoxy-D-manno-octulosonate transferasechromosome CDS2131607 747 - 0.532798
kdtA SDY_4063 3-deoxy-D-manno-octulosonic-acid transferasechromosome CDS3800809 1278 + 0.537559
lepA SDY_2810 GTP-binding elongation factorchromosome CDS2600166 1800 - 0.535556
lgt SDY_3045 phosphatidylglycerol-prolipoprotein diacylglyceryl transferasechromosome CDS2821791 876 - 0.528539
lnt SDY_0593 apolipoprotein N-acyltransferasechromosome CDS562829 1539 - 0.549058
lolA SDY_2370 periplasmic protein effects translocation of lipoproteins from inner membrane to outerchromosome CDS2168570 615 - 0.505691
lpp SDY_1908 murein lipoproteinchromosome CDS1738394 237 + 0.506329
lpxA SDY_0197 UDP-N-acetylglucosamine acetyltransferasechromosome CDS202822 789 + 0.533587
lpxB SDY_0198 tetraacyldisaccharide-1-Pchromosome CDS203610 1149 + 0.538729
lpxC SDY_0126 UDP-3-O-acyl N-acetylglucosamine deacetylasechromosome CDS127211 918 + 0.510893
lpxD SDY_0195 UDP-3-O-(3-hydroxymyristoyl)-glucosamineN-acyltr ansferasechromosome CDS201233 1026 + 0.528265
lspA SDY_0049 prolipoprotein signal peptidasechromosome CDS43996 495 + 0.529293
lytB SDY_0051 control of stringent responsechromosome CDS45029 951 + 0.548896
mdoB SDY_4613 phosphoglycerol transferase Ichromosome CDS4322255 2253 - 0.522858
mdoH SDY_2301 membrane glycosyltransferasechromosome CDS2087765 2544 - 0.545597
mepA SDY_2527 murein DD-endopeptidase, penicillin-insensitivechromosome CDS2325652 825 - 0.555152
mltA SDY_3031 membrane-bound lytic murein transglycosylase Achromosome CDS2802819 1098 - 0.527322
mltB SDY_2897 membrane-bound lytic murein transglycosylase Bchromosome CDS2678438 1086 - 0.547882
mltC SDY_3109 membrane-bound lytic murein transglycosylase Cchromosome CDS2884159 1083 - 0.512465
mltE SDY_1231 murein transglycosylase Echromosome CDS1139693 726 + 0.50551
mraY SDY_0117 possible phospho-N-acetylmuramoyl-pentapeptide transferasechromosome CDS116656 1083 + 0.530009
mrcA SDY_3682 peptidoglycan synthetasechromosome CDS3414737 2577 - 0.554133
mrcB SDY_0165 peptidoglycan synthetasechromosome CDS165059 2535 + 0.549112
mrdA SDY_0557 penicillin-binding protein 2chromosome CDS539118 1902 - 0.526814
mreC SDY_3425 rod shape-determining proteinchromosome CDS3182614 1104 - 0.557971
mreD SDY_3424 rod shape-determining proteinchromosome CDS3182126 489 - 0.509202
msbB SDY_1142 suppressor of htrBchromosome CDS1062219 972 - 0.515432
mtgA SDY_3389 putative peptidoglycan enzymechromosome CDS3140330 729 - 0.51989
murA SDY_3370 UDP-N-glucosamine 1-carboxyvinyltransferasechromosome CDS3126493 1260 - 0.530952
murB SDY_3756 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS3485583 1029 - 0.466472
murC SDY_0121 UDP-N-acetyl-muramate:alanine ligasechromosome CDS121419 1476 + 0.545393
murD SDY_0118 UDP-N-acetylmuramoylalanine-D-glutamate ligasechromosome CDS117741 1317 + 0.545938
murE SDY_0115 meso-diaminopimelate-adding enzymechromosome CDS113820 1488 + 0.570565
murF SDY_0116 D-alanine:D-alanine-adding enzymechromosome CDS115304 1359 + 0.548933
murG SDY_0120 UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS120298 1068 + 0.561798
murI SDY_3761 glutamate racemasechromosome CDS3492121 870 - 0.513793
nanA SDY_3400 N-acetylneuraminate lyasechromosome CDS3156904 894 - 0.521253
nlpB SDY_2666 lipoprotein-34chromosome CDS2457420 1038 - 0.55106
nlpC SDY_1803 lipoproteinchromosome CDS1641335 465 - 0.492473
nlpD SDY_2941 lipoproteinchromosome CDS2720729 1140 - 0.522807
ompA SDY_0930 outer membrane protein 3achromosome CDS880379 1053 - 0.540361
ompC SDY_0861 outer membrane protein 1bchromosome CDS810258 1128 + 0.503546
ompF SDY_2328 outer membrane protein 1a (Ia;b;F)chromosome CDS2115680 1089 + 0.476584
ompX SDY_0781 outer membrane protein Xchromosome CDS728975 516 - 0.513566
pal SDY_0689 peptidoglycan-associated lipoproteinchromosome CDS651695 522 + 0.515326
pbpG SDY_2154 penicillin-binding protein 7chromosome CDS1951742 942 + 0.509554
pldA SDY_3922 outer membrane phospholipase Achromosome CDS3654541 870 - 0.513793
prc SDY_1978 carboxy-terminal protease for penicillin-binding protein 3chromosome CDS1797264 2049 - 0.500244
rfaC SDY_4053 heptosyl transferase Ichromosome CDS3790527 960 + 0.511458
rfaD SDY_4051 ADP-L-glycero-D-mannoheptose-6-epimerasechromosome CDS3788535 933 + 0.50911
rfaF SDY_4052 ADP-heptose--lps heptosyltransferase IIchromosome CDS3789477 1047 + 0.536772
rfaG SDY_4061 glucosyltransferase Ichromosome CDS3798217 1125 - 0.482667
rfaI SDY_4059 Lipopolysaccharide 1,3-galactosyltransferasechromosome CDS3796395 1017 - 0.380531
rfaJ SDY_4058 Lipopolysaccharide 1,2-glucosyltransferasechromosome CDS3795383 996 - 0.350402
rfbA SDY_2206 glucose-1-phosphate thymidylyltransferasechromosome CDS2008824 879 + 0.432309
rfbB SDY_2204 dTDP-glucose 4,6 dehydratasechromosome CDS2006782 1086 + 0.437385
rfbC SDY_2207 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS2009705 558 + 0.353047
rfbD SDY_2205 dTDP-6-deoxy-L-mannose-dehydrogenasechromosome CDS2007867 900 + 0.471111
rfe SDY_3964 UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferasechromosome CDS3694133 1104 - 0.492754
rffH SDY_3959 glucose-1-phosphate thymidylyltransferasechromosome CDS3688755 882 - 0.548753
rhsA SDY_4210 rhsA protein in rhs elementchromosome CDS3937859 3642 - 0.613125
rhsB SDY_3800 rhsB protein in rhs elementchromosome CDS3535728 3642 - 0.613125
rhsC SDY_0636 rhsC protein in rhs elementchromosome CDS599034 3264 + 0.625919
rlpA SDY_0555 minor lipoproteinchromosome CDS536904 1089 - 0.575758
rlpB SDY_0563 minor lipoproteinchromosome CDS544415 582 - 0.517182
shuY SDY_3549 conserved hypothetical proteinchromosome CDS3283376 624 - 0.565705
slp SDY_3557 outer membrane protein induced after carbon starvationchromosome CDS3291263 600 - 0.443333
slt SDY_4653 soluble lytic murein transglycosylasechromosome CDS4358391 1965 + 0.542494
slyB SDY_1864 putative outer membrane proteinchromosome CDS1699377 468 + 0.50641
spr SDY_0904 putative lipoproteinchromosome CDS853766 567 - 0.467372
tolA SDY_0687 membrane spanning proteinchromosome CDS648970 1266 + 0.522117
tolC SDY_3205 outer membrane channelchromosome CDS2967943 1488 - 0.513441
tonB SDY_1316 TonBchromosome CDS1220191 720 + 0.545833
tsx SDY_0323 nucleoside channelchromosome CDS311896 885 + 0.505085
ugd SDY_2213 UDP-glucose 6-dehydrogenasechromosome CDS2017207 1167 + 0.43102
vacJ SDY_2550 lipoprotein precursorchromosome CDS2346527 756 - 0.517196
waaL SDY_4054 lipid A-core:surface polymer ligase WaaLchromosome CDS3791534 1254 - 0.322967
waaQ SDY_4062 lipopolysaccharide core biosynthesis proteinchromosome CDS3799338 1059 - 0.469311
waaW SDY_4056 UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferasechromosome CDS3793627 1029 - 0.372206
waaX SDY_4055 putative beta1,4-galactosyltransferase WaaXchromosome CDS3792822 774 - 0.301034
wecB SDY_3962 UDP-N-acetyl glucosamine-2-epimerasechromosome CDS3691889 1173 - 0.523444
wecC SDY_3961 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenasechromosome CDS3690630 1263 - 0.539984
wecE SDY_3957 putative regulatorchromosome CDS3686968 1131 - 0.543767
wecG SDY_3953 probable UDP-N-acetyl-D-mannosaminuronic acid transferasechromosome CDS3682548 741 - 0.534413
wzzB SDY_2214 regulator of length of O-antigen component of lipopolysaccharide chainschromosome CDS2018463 1035 + 0.455072
wzzE SDY_3963 putative transport proteinchromosome CDS3693075 1050 - 0.530476
yabC SDY_0112 putative apolipoproteinchromosome CDS110748 942 + 0.548832
yaeF SDY_0212 conserved hypothetical proteinchromosome CDS217152 825 - 0.492121
yaeL SDY_0192 conserved hypothetical proteinchromosome CDS196808 1353 + 0.506282
yaeT SDY_0193 conserved hypothetical proteinchromosome CDS198190 2433 + 0.50596
yafL SDY_0253 putative lipoproteinchromosome CDS250818 750 + 0.530667
yajG SDY_0299 putative polymerase/proteinasechromosome CDS291977 681 + 0.497797
ybdG SDY_0490 putative transportchromosome CDS476873 1248 - 0.476763
ybjT SDY_2394 putative dTDP-glucose enzymechromosome CDS2198720 1431 + 0.548567
ycaH SDY_2343 YcaHchromosome CDS2133853 987 - 0.546099
yccC SDY_0957 conserved hypothetical proteinchromosome CDS904685 2181 - 0.509399
yccZ SDY_0959 putative function in exopolysaccharide productionchromosome CDS907319 1140 - 0.510526
ycfN SDY_2044 putative beta-glucosidasechromosome CDS1855918 825 - 0.529697
ycfU SDY_2034 conserved hypothetical proteinchromosome CDS1843354 1200 - 0.540833
ycfW SDY_2032 putative kinasechromosome CDS1841416 1245 - 0.514859
ycgR SDY_1233 conserved hypothetical proteinchromosome CDS1140420 735 - 0.510204
yciD SDY_1320 putative outer membrane proteinchromosome CDS1223122 639 + 0.499218
ycjG SDY_1403 putative muconate cycloisomerase Ichromosome CDS1296141 1008 + 0.542659
ydhO SDY_1881 putative lipoproteinchromosome CDS1714725 828 + 0.477053
yeaF SDY_1485 conserved hypothetical proteinchromosome CDS1361643 747 + 0.522088
yebA SDY_1143 conserved hypothetical proteinchromosome CDS1063310 1260 - 0.526984
yegX SDY_2275 conserved hypothetical proteinchromosome CDS2070768 498 - 0.493976
yehZ SDY_2157 putative transport system permease proteinchromosome CDS1957182 918 + 0.527233
yejO SDY_0889 putative ATP-binding component of a transport systemchromosome CDS835867 2055 + 0.492457
yfhD SDY_2748 putative periplasmic binding transport proteinchromosome CDS2549820 1419 + 0.503876
yfiB SDY_2779 putative outer membrane proteinchromosome CDS2575249 414 + 0.492754
ygeA SDY_3057 putative resistance proteinschromosome CDS2836574 684 - 0.505848
yggB SDY_3158 putative transport proteinchromosome CDS2925119 861 + 0.499419
yhiU SDY_3538 putative membrane proteinchromosome CDS3274832 1155 - 0.543723
yhjG SDY_4544 conserved hypothetical proteinchromosome CDS4251031 2076 - 0.532274
yhjO SDY_4553 putative cellulose synthasechromosome CDS4267359 2667 - 0.553431
yibD SDY_4048 putative regulatorchromosome CDS3784847 1005 - 0.457711
yiiX SDY_3772 conserved hypothetical proteinchromosome CDS3501678 609 - 0.518883
yjeP SDY_4433 putative periplasmic binding proteinchromosome CDS4146004 3324 + 0.557762
yjfG SDY_4251 putative ligasechromosome CDS3980981 1374 + 0.552402
yohG SDY_2150 putative channel/filament proteinschromosome CDS1948211 921 + 0.537459
yohH SDY_2149 conserved hypothetical proteinchromosome CDS1947773 345 + 0.492754
yohK SDY_2145 putative seritonin transporterchromosome CDS1944282 696 - 0.533046
yqhH SDY_3222 conserved hypothetical proteinchromosome CDS2987147 258 - 0.488372
yraR SDY_3331 conserved hypothetical proteinchromosome CDS3088923 681 - 0.553598
ytfB SDY_4376 conserved hypothetical proteinchromosome CDS4096641 675 - 0.554074
ytfG SDY_4382 putative oxidoreductasechromosome CDS4101721 861 - 0.542393
ytfM SDY_4457 conserved hypothetical proteinchromosome CDS4169978 1734 + 0.533449